RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 BECN1Q14457 450 aa18.16■□□□□ 0.5
CACNB3-209ENST00000548860 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
CACNB3-209ENST00000548860 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
CACNB3-209ENST00000548860 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
CACNB3-209ENST00000548860 TEX14Q8IWB6 1497 aa18.15■□□□□ 0.5
CACNB3-209ENST00000548860 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
CACNB3-209ENST00000548860 TCP11L2Q8N4U5 519 aa18.14■□□□□ 0.5
CACNB3-209ENST00000548860 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
CACNB3-209ENST00000548860 KIF14Q15058 1648 aa18.14■□□□□ 0.49
CACNB3-209ENST00000548860 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
CACNB3-209ENST00000548860 FBLN1P23142 703 aa18.13■□□□□ 0.49
CACNB3-209ENST00000548860 TESK2Q96S53 571 aa18.13■□□□□ 0.49
CACNB3-209ENST00000548860 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
CACNB3-209ENST00000548860 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
CACNB3-209ENST00000548860 ATP10BO94823 1461 aa18.12■□□□□ 0.49
CACNB3-209ENST00000548860 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
CACNB3-209ENST00000548860 ADGRF5Q8IZF2 1346 aa18.12■□□□□ 0.49
CACNB3-209ENST00000548860 SCAPERQ9BY12 1400 aa18.11■□□□□ 0.49
CACNB3-209ENST00000548860 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
CACNB3-209ENST00000548860 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
CACNB3-209ENST00000548860 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
CACNB3-209ENST00000548860 E9PSI1 815 aa18.1■□□□□ 0.49
CACNB3-209ENST00000548860 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
CACNB3-209ENST00000548860 ANO8Q9HCE9 1232 aaPredicted RBP18.09■□□□□ 0.49
CACNB3-209ENST00000548860 HMOX1P09601 288 aa18.08■□□□□ 0.49
CACNB3-209ENST00000548860 MS4A1P11836 297 aa18.08■□□□□ 0.49
CACNB3-209ENST00000548860 NCLP19338 710 aaKnown RBP18.08■□□□□ 0.49
CACNB3-209ENST00000548860 CEP170Q5SW79 1584 aa18.07■□□□□ 0.48
CACNB3-209ENST00000548860 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
CACNB3-209ENST00000548860 IGHDP01880 384 aa18.06■□□□□ 0.48
CACNB3-209ENST00000548860 GSE1Q14687 1217 aa18.06■□□□□ 0.48
CACNB3-209ENST00000548860 SLFN5Q08AF3 891 aa18.04■□□□□ 0.48
CACNB3-209ENST00000548860 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
CACNB3-209ENST00000548860 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
CACNB3-209ENST00000548860 C1orf115Q9H7X2 142 aa18.03■□□□□ 0.48
CACNB3-209ENST00000548860 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
CACNB3-209ENST00000548860 LNPKQ9C0E8 428 aa18.02■□□□□ 0.48
CACNB3-209ENST00000548860 RWDD1Q9H446 243 aaPredicted RBP18.02■□□□□ 0.48
CACNB3-209ENST00000548860 DNMT1P26358 1616 aaKnown RBP18.02■□□□□ 0.47
CACNB3-209ENST00000548860 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
CACNB3-209ENST00000548860 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
CACNB3-209ENST00000548860 WWC1Q8IX03 1113 aa18.01■□□□□ 0.47
CACNB3-209ENST00000548860 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
CACNB3-209ENST00000548860 EXOSC9Q06265 439 aaKnown RBP18.01■□□□□ 0.47
CACNB3-209ENST00000548860 RIPK4P57078 832 aa18■□□□□ 0.47
CACNB3-209ENST00000548860 MYH16Q9H6N6 1097 aa18■□□□□ 0.47
CACNB3-209ENST00000548860 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
CACNB3-209ENST00000548860 PDZRN3Q9UPQ7 1066 aa17.99■□□□□ 0.47
CACNB3-209ENST00000548860 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
CACNB3-209ENST00000548860 CYB5RLQ6IPT4 315 aa17.98■□□□□ 0.47
CACNB3-209ENST00000548860 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
CACNB3-209ENST00000548860 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
CACNB3-209ENST00000548860 SEC24BO95487 1268 aa17.97■□□□□ 0.47
CACNB3-209ENST00000548860 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
CACNB3-209ENST00000548860 FOXD4L5Q5VV16 416 aaPredicted RBP17.97■□□□□ 0.47
CACNB3-209ENST00000548860 FOXD4L4Q8WXT5 416 aaPredicted RBP17.97■□□□□ 0.47
CACNB3-209ENST00000548860 ANKRD45Q5TZF3 282 aa17.96■□□□□ 0.47
CACNB3-209ENST00000548860 PARD3Q8TEW0 1356 aa17.96■□□□□ 0.47
CACNB3-209ENST00000548860 ZKSCAN2Q63HK3 967 aa17.96■□□□□ 0.47
CACNB3-209ENST00000548860 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
CACNB3-209ENST00000548860 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
CACNB3-209ENST00000548860 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
CACNB3-209ENST00000548860 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
CACNB3-209ENST00000548860 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
CACNB3-209ENST00000548860 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-209ENST00000548860 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
CACNB3-209ENST00000548860 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
CACNB3-209ENST00000548860 SLC4A10Q6U841 1118 aa17.93■□□□□ 0.46
CACNB3-209ENST00000548860 RLBP1P12271 317 aa17.92■□□□□ 0.46
CACNB3-209ENST00000548860 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-209ENST00000548860 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-209ENST00000548860 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
CACNB3-209ENST00000548860 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
CACNB3-209ENST00000548860 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
CACNB3-209ENST00000548860 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
CACNB3-209ENST00000548860 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
CACNB3-209ENST00000548860 TRAPPC8Q9Y2L5 1435 aa17.91■□□□□ 0.46
CACNB3-209ENST00000548860 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
CACNB3-209ENST00000548860 RNF123Q5XPI4 1314 aa17.9■□□□□ 0.46
CACNB3-209ENST00000548860 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
CACNB3-209ENST00000548860 LMOD2Q6P5Q4 547 aa17.9■□□□□ 0.46
CACNB3-209ENST00000548860 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
CACNB3-209ENST00000548860 LTV1Q96GA3 475 aaPredicted RBP17.89■□□□□ 0.46
CACNB3-209ENST00000548860 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
CACNB3-209ENST00000548860 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.45
CACNB3-209ENST00000548860 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
CACNB3-209ENST00000548860 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
CACNB3-209ENST00000548860 VGFO15240 615 aaPredicted RBP17.88■□□□□ 0.45
CACNB3-209ENST00000548860 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
CACNB3-209ENST00000548860 NUP160Q12769 1436 aa17.88■□□□□ 0.45
CACNB3-209ENST00000548860 A2MP01023 1474 aa17.87■□□□□ 0.45
CACNB3-209ENST00000548860 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
CACNB3-209ENST00000548860 C8orf34Q49A92 452 aa17.87■□□□□ 0.45
CACNB3-209ENST00000548860 DIAPH1O60610 1272 aaKnown RBP17.87■□□□□ 0.45
CACNB3-209ENST00000548860 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
CACNB3-209ENST00000548860 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
CACNB3-209ENST00000548860 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
CACNB3-209ENST00000548860 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
CACNB3-209ENST00000548860 IPO8O15397 1037 aaKnown RBP17.84■□□□□ 0.45
CACNB3-209ENST00000548860 TRIM44Q96DX7 344 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms