RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 CFAP74Q9C0B2 1584 aa9.64□□□□□ -0.87
PDZRN4-204ENST00000548316 STAC3Q96MF2 364 aa9.64□□□□□ -0.87
PDZRN4-204ENST00000548316 ASXL1Q8IXJ9 1541 aa9.64□□□□□ -0.87
PDZRN4-204ENST00000548316 USP32Q8NFA0 1604 aa9.64□□□□□ -0.87
PDZRN4-204ENST00000548316 UGGT1Q9NYU2 1555 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 HECW2Q9P2P5 1572 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 PIK3C2BO00750 1634 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 SHPRHQ149N8 1683 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 PIK3C2GO75747 1445 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 ZNF518AQ6AHZ1 1483 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 ERVK-7P63135 1459 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
PDZRN4-204ENST00000548316 SPAG9O60271 1321 aaKnown RBP9.62□□□□□ -0.87
PDZRN4-204ENST00000548316 RRP1P56182 461 aaKnown RBP9.62□□□□□ -0.87
PDZRN4-204ENST00000548316 PANK3Q9H999 370 aa9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 ZNF521Q96K83 1311 aa9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 ADGRB1O14514 1584 aa9.61□□□□□ -0.87
PDZRN4-204ENST00000548316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.6□□□□□ -0.87
PDZRN4-204ENST00000548316 POLR3GLQ9BT43 218 aa9.6□□□□□ -0.87
PDZRN4-204ENST00000548316 QRICH2Q9H0J4 1663 aa9.6□□□□□ -0.87
PDZRN4-204ENST00000548316 TMF1P82094 1093 aa9.6□□□□□ -0.87
PDZRN4-204ENST00000548316 ASXL2Q76L83 1435 aa9.59□□□□□ -0.87
PDZRN4-204ENST00000548316 SBNO2Q9Y2G9 1366 aa9.59□□□□□ -0.87
PDZRN4-204ENST00000548316 CAMSAP1Q5T5Y3 1602 aa9.59□□□□□ -0.87
PDZRN4-204ENST00000548316 AFAP1Q8N556 730 aa9.59□□□□□ -0.87
PDZRN4-204ENST00000548316 MLH3Q9UHC1 1453 aa9.58□□□□□ -0.88
PDZRN4-204ENST00000548316 ARHGEF28Q8N1W1 1705 aaKnown RBP9.58□□□□□ -0.88
PDZRN4-204ENST00000548316 RCAN3Q9UKA8 241 aa9.57□□□□□ -0.88
PDZRN4-204ENST00000548316 PLEKHH1Q9ULM0 1364 aa9.57□□□□□ -0.88
PDZRN4-204ENST00000548316 RICTORQ6R327 1708 aa9.57□□□□□ -0.88
PDZRN4-204ENST00000548316 VIRMAQ69YN4 1812 aaKnown RBP9.57□□□□□ -0.88
PDZRN4-204ENST00000548316 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
PDZRN4-204ENST00000548316 ABCC3O15438 1527 aa9.56□□□□□ -0.88
PDZRN4-204ENST00000548316 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
PDZRN4-204ENST00000548316 TRMT2AQ8IZ69 625 aaKnown RBP9.56□□□□□ -0.88
PDZRN4-204ENST00000548316 CDCA7LQ96GN5 454 aa9.55□□□□□ -0.88
PDZRN4-204ENST00000548316 KANK1Q14678 1352 aa9.55□□□□□ -0.88
PDZRN4-204ENST00000548316 EXOC6Q8TAG9 804 aa9.55□□□□□ -0.88
PDZRN4-204ENST00000548316 DIP2CQ9Y2E4 1556 aa9.54□□□□□ -0.88
PDZRN4-204ENST00000548316 NEXMIFQ5QGS0 1516 aa9.54□□□□□ -0.88
PDZRN4-204ENST00000548316 NOS1P29475 1434 aa9.54□□□□□ -0.88
PDZRN4-204ENST00000548316 CC2D1BQ5T0F9 858 aaKnown RBP9.54□□□□□ -0.88
PDZRN4-204ENST00000548316 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 NPATQ14207 1427 aa9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 CLTCQ00610 1675 aaKnown RBP9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 ANKRD26Q9UPS8 1709 aa9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 GLI2P10070 1586 aa9.53□□□□□ -0.88
PDZRN4-204ENST00000548316 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.88
PDZRN4-204ENST00000548316 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.88
PDZRN4-204ENST00000548316 ADGRF5Q8IZF2 1346 aa9.52□□□□□ -0.89
PDZRN4-204ENST00000548316 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.89
PDZRN4-204ENST00000548316 SENP3-EIF4A1A0A087X0R7 540 aa9.51□□□□□ -0.89
PDZRN4-204ENST00000548316 DUSP27Q5VZP5 1158 aa9.51□□□□□ -0.89
PDZRN4-204ENST00000548316 KDM2BQ8NHM5 1336 aa9.51□□□□□ -0.89
PDZRN4-204ENST00000548316 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
PDZRN4-204ENST00000548316 TULP4Q9NRJ4 1543 aa9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 ADGRB2O60241 1585 aa9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 NEO1Q92859 1461 aa9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 MS4A1P11836 297 aa9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 CFAP65Q6ZU64 1925 aaKnown RBP9.5□□□□□ -0.89
PDZRN4-204ENST00000548316 TCERG1O14776 1098 aaKnown RBP9.49□□□□□ -0.89
PDZRN4-204ENST00000548316 ARHGAP31Q2M1Z3 1444 aa9.49□□□□□ -0.89
PDZRN4-204ENST00000548316 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
PDZRN4-204ENST00000548316 PREX1Q8TCU6 1659 aa9.49□□□□□ -0.89
PDZRN4-204ENST00000548316 KIF3BO15066 747 aa9.48□□□□□ -0.89
PDZRN4-204ENST00000548316 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
PDZRN4-204ENST00000548316 TMEM131LA2VDJ0 1609 aa9.48□□□□□ -0.89
PDZRN4-204ENST00000548316 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
PDZRN4-204ENST00000548316 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
PDZRN4-204ENST00000548316 SETD1AO15047 1707 aaKnown RBP9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 ZFYVE9O95405 1425 aa9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
PDZRN4-204ENST00000548316 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.89
PDZRN4-204ENST00000548316 C14orf93Q9H972 538 aaKnown RBP9.46□□□□□ -0.89
PDZRN4-204ENST00000548316 CD109Q6YHK3 1445 aa9.46□□□□□ -0.9
PDZRN4-204ENST00000548316 SLC24A1O60721 1099 aa9.46□□□□□ -0.9
PDZRN4-204ENST00000548316 C20orf194Q5TEA3 1177 aa9.45□□□□□ -0.9
PDZRN4-204ENST00000548316 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
PDZRN4-204ENST00000548316 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
PDZRN4-204ENST00000548316 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
PDZRN4-204ENST00000548316 RPGRIP1LQ68CZ1 1315 aa9.45□□□□□ -0.9
PDZRN4-204ENST00000548316 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
PDZRN4-204ENST00000548316 PLIN1O60240 522 aa9.44□□□□□ -0.9
PDZRN4-204ENST00000548316 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
PDZRN4-204ENST00000548316 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
PDZRN4-204ENST00000548316 PDE4AP27815 886 aa9.43□□□□□ -0.9
PDZRN4-204ENST00000548316 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
PDZRN4-204ENST00000548316 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
PDZRN4-204ENST00000548316 KIF20BQ96Q89 1820 aa9.43□□□□□ -0.9
PDZRN4-204ENST00000548316 GOLGA2Q08379 1002 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms