RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 ARID4BQ4LE39 1312 aaPredicted RBP19.1■□□□□ 0.65
SMPDL3B-205ENST00000548116 ADGRF5Q8IZF2 1346 aa19.1■□□□□ 0.65
SMPDL3B-205ENST00000548116 KIAA1210Q9ULL0 1709 aa19.09■□□□□ 0.65
SMPDL3B-205ENST00000548116 RPGRIP1LQ68CZ1 1315 aa19.08■□□□□ 0.65
SMPDL3B-205ENST00000548116 ZMYM3Q14202 1370 aa19.08■□□□□ 0.64
SMPDL3B-205ENST00000548116 ST20-MTHFSA0A0A6YYL1 179 aa19.08■□□□□ 0.64
SMPDL3B-205ENST00000548116 TMEM131LA2VDJ0 1609 aa19.07■□□□□ 0.64
SMPDL3B-205ENST00000548116 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
SMPDL3B-205ENST00000548116 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
SMPDL3B-205ENST00000548116 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
SMPDL3B-205ENST00000548116 IQGAP1P46940 1657 aa19.04■□□□□ 0.64
SMPDL3B-205ENST00000548116 ESF1Q9H501 851 aaKnown RBP19.04■□□□□ 0.64
SMPDL3B-205ENST00000548116 PIK3C2GO75747 1445 aa19.03■□□□□ 0.64
SMPDL3B-205ENST00000548116 CFAP70Q5T0N1 1121 aa19.02■□□□□ 0.64
SMPDL3B-205ENST00000548116 SCAF11Q99590 1463 aaKnown RBP19■□□□□ 0.63
SMPDL3B-205ENST00000548116 TESK2Q96S53 571 aa18.99■□□□□ 0.63
SMPDL3B-205ENST00000548116 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
SMPDL3B-205ENST00000548116 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
SMPDL3B-205ENST00000548116 VGFO15240 615 aaPredicted RBP18.97■□□□□ 0.63
SMPDL3B-205ENST00000548116 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
SMPDL3B-205ENST00000548116 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
SMPDL3B-205ENST00000548116 NUTM2DQ5VT03 806 aaPredicted RBP18.96■□□□□ 0.63
SMPDL3B-205ENST00000548116 FER1L4A9Z1Z3 1794 aa18.95■□□□□ 0.62
SMPDL3B-205ENST00000548116 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
SMPDL3B-205ENST00000548116 TNRQ92752 1358 aa18.95■□□□□ 0.62
SMPDL3B-205ENST00000548116 C3P01024 1663 aa18.93■□□□□ 0.62
SMPDL3B-205ENST00000548116 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
SMPDL3B-205ENST00000548116 STAG3Q9UJ98 1225 aa18.92■□□□□ 0.62
SMPDL3B-205ENST00000548116 ANP32CO43423 234 aa18.91■□□□□ 0.62
SMPDL3B-205ENST00000548116 CEBPAP49715 358 aaPredicted RBP18.91■□□□□ 0.62
SMPDL3B-205ENST00000548116 POLR3GLQ9BT43 218 aa18.9■□□□□ 0.62
SMPDL3B-205ENST00000548116 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
SMPDL3B-205ENST00000548116 KDM5AP29375 1690 aaKnown RBP18.89■□□□□ 0.61
SMPDL3B-205ENST00000548116 RIMS2Q9UQ26 1411 aa18.88■□□□□ 0.61
SMPDL3B-205ENST00000548116 MYO3AQ8NEV4 1616 aa18.88■□□□□ 0.61
SMPDL3B-205ENST00000548116 TMEM132EQ6IEE7 984 aa18.88■□□□□ 0.61
SMPDL3B-205ENST00000548116 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
SMPDL3B-205ENST00000548116 ASXL1Q8IXJ9 1541 aa18.87■□□□□ 0.61
SMPDL3B-205ENST00000548116 TMF1P82094 1093 aa18.86■□□□□ 0.61
SMPDL3B-205ENST00000548116 NLRP1Q9C000 1473 aa18.85■□□□□ 0.61
SMPDL3B-205ENST00000548116 ALKQ9UM73 1620 aa18.83■□□□□ 0.61
SMPDL3B-205ENST00000548116 CCER2I3L3R5 266 aa18.83■□□□□ 0.6
SMPDL3B-205ENST00000548116 ADAMTSL3P82987 1691 aa18.83■□□□□ 0.6
SMPDL3B-205ENST00000548116 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
SMPDL3B-205ENST00000548116 RIMS1Q86UR5 1692 aaKnown RBP18.82■□□□□ 0.6
SMPDL3B-205ENST00000548116 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
SMPDL3B-205ENST00000548116 SENP3Q9H4L4 574 aaPredicted RBP18.81■□□□□ 0.6
SMPDL3B-205ENST00000548116 ARHGEF28Q8N1W1 1705 aaKnown RBP18.81■□□□□ 0.6
SMPDL3B-205ENST00000548116 CENPJQ9HC77 1338 aaPredicted RBP18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 TMEM2Q9UHN6 1383 aa18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 PTPRMP28827 1452 aa18.8■□□□□ 0.6
SMPDL3B-205ENST00000548116 PRKRIP1Q9H875 184 aaPredicted RBP18.79■□□□□ 0.6
SMPDL3B-205ENST00000548116 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
SMPDL3B-205ENST00000548116 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
SMPDL3B-205ENST00000548116 YTHDC1Q96MU7 727 aaKnown RBP18.78■□□□□ 0.6
SMPDL3B-205ENST00000548116 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
SMPDL3B-205ENST00000548116 CDCA8Q53HL2 280 aa18.76■□□□□ 0.59
SMPDL3B-205ENST00000548116 YTHDC2Q9H6S0 1430 aaKnown RBP18.76■□□□□ 0.59
SMPDL3B-205ENST00000548116 HDGFP51858 240 aaKnown RBP18.74■□□□□ 0.59
SMPDL3B-205ENST00000548116 MYOM1P52179 1685 aa18.74■□□□□ 0.59
SMPDL3B-205ENST00000548116 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
SMPDL3B-205ENST00000548116 ARHGAP23Q9P227 1491 aa18.73■□□□□ 0.59
SMPDL3B-205ENST00000548116 SLIT1O75093 1534 aa18.73■□□□□ 0.59
SMPDL3B-205ENST00000548116 STK26Q9P289 416 aa18.72■□□□□ 0.59
SMPDL3B-205ENST00000548116 LTKP29376 864 aa18.72■□□□□ 0.59
SMPDL3B-205ENST00000548116 PANK3Q9H999 370 aa18.71■□□□□ 0.59
SMPDL3B-205ENST00000548116 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SMPDL3B-205ENST00000548116 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
SMPDL3B-205ENST00000548116 METP08581 1390 aa18.69■□□□□ 0.58
SMPDL3B-205ENST00000548116 PLEKHG1Q9ULL1 1385 aa18.69■□□□□ 0.58
SMPDL3B-205ENST00000548116 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3B-205ENST00000548116 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
SMPDL3B-205ENST00000548116 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
SMPDL3B-205ENST00000548116 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
SMPDL3B-205ENST00000548116 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
SMPDL3B-205ENST00000548116 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
SMPDL3B-205ENST00000548116 ABCC11Q96J66 1382 aa18.67■□□□□ 0.58
SMPDL3B-205ENST00000548116 PRAM1Q96QH2 718 aa18.66■□□□□ 0.58
SMPDL3B-205ENST00000548116 MED14O60244 1454 aa18.65■□□□□ 0.58
SMPDL3B-205ENST00000548116 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.58
SMPDL3B-205ENST00000548116 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.58
SMPDL3B-205ENST00000548116 EID1Q9Y6B2 187 aa18.64■□□□□ 0.58
SMPDL3B-205ENST00000548116 ZNF142P52746 1687 aaPredicted RBP18.64■□□□□ 0.58
SMPDL3B-205ENST00000548116 SETD1BQ9UPS6 1966 aaKnown RBP18.64■□□□□ 0.57
SMPDL3B-205ENST00000548116 CENPBP07199 599 aaPredicted RBP18.64■□□□□ 0.57
SMPDL3B-205ENST00000548116 PUS7Q96PZ0 661 aaKnown RBP18.63■□□□□ 0.57
SMPDL3B-205ENST00000548116 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
SMPDL3B-205ENST00000548116 KTN1Q86UP2 1357 aaKnown RBP18.63■□□□□ 0.57
SMPDL3B-205ENST00000548116 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
SMPDL3B-205ENST00000548116 POGKQ9P215 609 aa18.62■□□□□ 0.57
SMPDL3B-205ENST00000548116 PARD3Q8TEW0 1356 aa18.62■□□□□ 0.57
SMPDL3B-205ENST00000548116 TECPR2O15040 1411 aa18.62■□□□□ 0.57
SMPDL3B-205ENST00000548116 BCANQ96GW7 911 aa18.62■□□□□ 0.57
SMPDL3B-205ENST00000548116 PLEKHH1Q9ULM0 1364 aa18.62■□□□□ 0.57
SMPDL3B-205ENST00000548116 RALBP1Q15311 655 aa18.61■□□□□ 0.57
SMPDL3B-205ENST00000548116 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
SMPDL3B-205ENST00000548116 MINK1Q8N4C8 1332 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms