RNA–Protein interactions for RNA: ENST00000547581.5

PFKM-209, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 3,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-209ENST00000547581 CCDC136Q96JN2 1154 aa11.45□□□□□ -0.58
PFKM-209ENST00000547581 CCDC144AA2RUR9 1427 aa11.45□□□□□ -0.58
PFKM-209ENST00000547581 VIRMAQ69YN4 1812 aaKnown RBP11.44□□□□□ -0.58
PFKM-209ENST00000547581 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
PFKM-209ENST00000547581 ZNF142P52746 1687 aaPredicted RBP11.44□□□□□ -0.58
PFKM-209ENST00000547581 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
PFKM-209ENST00000547581 GPRASP1Q5JY77 1395 aa11.44□□□□□ -0.58
PFKM-209ENST00000547581 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
PFKM-209ENST00000547581 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
PFKM-209ENST00000547581 C3P01024 1663 aa11.42□□□□□ -0.58
PFKM-209ENST00000547581 A2MP01023 1474 aa11.42□□□□□ -0.58
PFKM-209ENST00000547581 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
PFKM-209ENST00000547581 TET3O43151 1660 aa11.42□□□□□ -0.58
PFKM-209ENST00000547581 PRAG1Q86YV5 1406 aa11.41□□□□□ -0.58
PFKM-209ENST00000547581 NEURL4Q96JN8 1562 aa11.41□□□□□ -0.58
PFKM-209ENST00000547581 HNRNPMP52272 730 aaKnown RBP eCLIP11.41□□□□□ -0.58
PFKM-209ENST00000547581 PIK3C2BO00750 1634 aa11.41□□□□□ -0.58
PFKM-209ENST00000547581 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
PFKM-209ENST00000547581 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
PFKM-209ENST00000547581 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.59
PFKM-209ENST00000547581 MADDQ8WXG6 1647 aa11.39□□□□□ -0.59
PFKM-209ENST00000547581 CEP152O94986 1710 aa11.39□□□□□ -0.59
PFKM-209ENST00000547581 ARHGAP31Q2M1Z3 1444 aa11.38□□□□□ -0.59
PFKM-209ENST00000547581 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
PFKM-209ENST00000547581 ABCC3O15438 1527 aa11.37□□□□□ -0.59
PFKM-209ENST00000547581 SPATA31D1Q6ZQQ2 1576 aa11.37□□□□□ -0.59
PFKM-209ENST00000547581 CLTCQ00610 1675 aaKnown RBP11.37□□□□□ -0.59
PFKM-209ENST00000547581 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
PFKM-209ENST00000547581 TMF1P82094 1093 aa11.37□□□□□ -0.59
PFKM-209ENST00000547581 CDCA8Q53HL2 280 aa11.37□□□□□ -0.59
PFKM-209ENST00000547581 RRP1P56182 461 aaKnown RBP11.36□□□□□ -0.59
PFKM-209ENST00000547581 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
PFKM-209ENST00000547581 EFCAB6Q5THR3 1501 aa11.36□□□□□ -0.59
PFKM-209ENST00000547581 RCAN3Q9UKA8 241 aa11.36□□□□□ -0.59
PFKM-209ENST00000547581 MS4A1P11836 297 aa11.35□□□□□ -0.59
PFKM-209ENST00000547581 BLMP54132 1417 aaPredicted RBP11.34□□□□□ -0.59
PFKM-209ENST00000547581 RIMS1Q86UR5 1692 aaKnown RBP11.34□□□□□ -0.59
PFKM-209ENST00000547581 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
PFKM-209ENST00000547581 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
PFKM-209ENST00000547581 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
PFKM-209ENST00000547581 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
PFKM-209ENST00000547581 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
PFKM-209ENST00000547581 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
PFKM-209ENST00000547581 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
PFKM-209ENST00000547581 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
PFKM-209ENST00000547581 DEKP35659 375 aaKnown RBP11.31□□□□□ -0.6
PFKM-209ENST00000547581 PLA2R1Q13018 1463 aa11.31□□□□□ -0.6
PFKM-209ENST00000547581 IFT172Q9UG01 1749 aa11.31□□□□□ -0.6
PFKM-209ENST00000547581 RAPGEF3O95398 923 aa11.31□□□□□ -0.6
PFKM-209ENST00000547581 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
PFKM-209ENST00000547581 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
PFKM-209ENST00000547581 NPATQ14207 1427 aa11.3□□□□□ -0.6
PFKM-209ENST00000547581 AFAP1Q8N556 730 aa11.3□□□□□ -0.6
PFKM-209ENST00000547581 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
PFKM-209ENST00000547581 MYOM1P52179 1685 aa11.3□□□□□ -0.6
PFKM-209ENST00000547581 SYNMO15061 1565 aa11.29□□□□□ -0.6
PFKM-209ENST00000547581 TESK2Q96S53 571 aa11.29□□□□□ -0.6
PFKM-209ENST00000547581 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
PFKM-209ENST00000547581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
PFKM-209ENST00000547581 SPAG9O60271 1321 aaKnown RBP11.28□□□□□ -0.6
PFKM-209ENST00000547581 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
PFKM-209ENST00000547581 PTPRTO14522 1441 aa11.27□□□□□ -0.6
PFKM-209ENST00000547581 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.6
PFKM-209ENST00000547581 PANK3Q9H999 370 aa11.27□□□□□ -0.6
PFKM-209ENST00000547581 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
PFKM-209ENST00000547581 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
PFKM-209ENST00000547581 NBPF1Q3BBV0 1214 aa11.27□□□□□ -0.61
PFKM-209ENST00000547581 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
PFKM-209ENST00000547581 KNSTRNQ9Y448 316 aa11.27□□□□□ -0.61
PFKM-209ENST00000547581 NOS1P29475 1434 aa11.26□□□□□ -0.61
PFKM-209ENST00000547581 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
PFKM-209ENST00000547581 TRPM2O94759 1503 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 KANK1Q14678 1352 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 DISP3Q9P2K9 1392 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 PTPRMP28827 1452 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
PFKM-209ENST00000547581 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 DDRGK1Q96HY6 314 aa11.25□□□□□ -0.61
PFKM-209ENST00000547581 SCAF11Q99590 1463 aaKnown RBP11.24□□□□□ -0.61
PFKM-209ENST00000547581 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
PFKM-209ENST00000547581 CC2D1BQ5T0F9 858 aaKnown RBP11.23□□□□□ -0.61
PFKM-209ENST00000547581 USP35Q9P2H5 1018 aa11.23□□□□□ -0.61
PFKM-209ENST00000547581 TMEM131LA2VDJ0 1609 aa11.22□□□□□ -0.61
PFKM-209ENST00000547581 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
PFKM-209ENST00000547581 PDE4AP27815 886 aa11.22□□□□□ -0.61
PFKM-209ENST00000547581 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
PFKM-209ENST00000547581 UGGT1Q9NYU2 1555 aa11.21□□□□□ -0.61
PFKM-209ENST00000547581 SETD1BQ9UPS6 1966 aaKnown RBP11.21□□□□□ -0.61
PFKM-209ENST00000547581 PPM1GO15355 546 aaPredicted RBP11.21□□□□□ -0.62
PFKM-209ENST00000547581 BACH2Q9BYV9 841 aa11.21□□□□□ -0.62
PFKM-209ENST00000547581 SETD1AO15047 1707 aaKnown RBP11.21□□□□□ -0.62
PFKM-209ENST00000547581 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.62
PFKM-209ENST00000547581 ASXL1Q8IXJ9 1541 aa11.2□□□□□ -0.62
PFKM-209ENST00000547581 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
PFKM-209ENST00000547581 CLTCL1P53675 1640 aa11.19□□□□□ -0.62
PFKM-209ENST00000547581 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
PFKM-209ENST00000547581 CENPQQ7L2Z9 268 aaPredicted RBP11.19□□□□□ -0.62
PFKM-209ENST00000547581 SLIT1O75093 1534 aa11.19□□□□□ -0.62
PFKM-209ENST00000547581 MYO5BQ9ULV0 1848 aa11.19□□□□□ -0.62
PFKM-209ENST00000547581 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms