RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	C3orf80	F5H4A9	247 aa		11.51	□□□□□ -0.57
LGR5-204	ENST00000547310	MAP3K7	O43318	606 aa		11.51	□□□□□ -0.57
LGR5-204	ENST00000547310	PNMA3	Q9UL41	463 aa		11.51	□□□□□ -0.57
LGR5-204	ENST00000547310	DPYSL4	O14531	572 aa		11.5	□□□□□ -0.57
LGR5-204	ENST00000547310	VSIG10	Q8N0Z9	540 aa		11.49	□□□□□ -0.57
LGR5-204	ENST00000547310	ANKLE1	Q8NAG6	615 aa		11.48	□□□□□ -0.57
LGR5-204	ENST00000547310	NBR1	Q14596	966 aa		11.47	□□□□□ -0.57
LGR5-204	ENST00000547310	CADPS2	Q86UW7	1296 aa		11.47	□□□□□ -0.57
LGR5-204	ENST00000547310	CRIPAK	Q8N1N5	446 aa		11.47	□□□□□ -0.57
LGR5-204	ENST00000547310	ST8SIA5	O15466	376 aa		11.46	□□□□□ -0.57
LGR5-204	ENST00000547310	RNF40	O75150	1001 aa		11.46	□□□□□ -0.57
LGR5-204	ENST00000547310	ZNF697	Q5TEC3	545 aa		11.46	□□□□□ -0.57
LGR5-204	ENST00000547310	NFX1	Q12986	1120 aa	Known RBP	11.45	□□□□□ -0.58
LGR5-204	ENST00000547310	LIAT1	Q6ZQX7	453 aa		11.44	□□□□□ -0.58
LGR5-204	ENST00000547310	SLF2	Q8IX21	1173 aa		11.44	□□□□□ -0.58
LGR5-204	ENST00000547310	NUDT18	Q6ZVK8	323 aa		11.42	□□□□□ -0.58
LGR5-204	ENST00000547310	PRR14	Q9BWN1	585 aa		11.42	□□□□□ -0.58
LGR5-204	ENST00000547310	RBM27	Q9P2N5	1060 aa	Known RBP	11.42	□□□□□ -0.58
LGR5-204	ENST00000547310	TNFRSF10A	O00220	468 aa		11.41	□□□□□ -0.58
LGR5-204	ENST00000547310	KDM2A	Q9Y2K7	1162 aa		11.4	□□□□□ -0.58
LGR5-204	ENST00000547310	LMOD2	Q6P5Q4	547 aa		11.38	□□□□□ -0.59
LGR5-204	ENST00000547310	PCDHB3	Q9Y5E6	796 aa		11.38	□□□□□ -0.59
LGR5-204	ENST00000547310	AVP	P01185	164 aa		11.37	□□□□□ -0.59
LGR5-204	ENST00000547310	SWT1	Q5T5J6	900 aa	Known RBP	11.37	□□□□□ -0.59
LGR5-204	ENST00000547310	PDIA6	Q15084	440 aa		11.36	□□□□□ -0.59
LGR5-204	ENST00000547310	C11orf95	C9JLR9	678 aa	Predicted RBP	11.35	□□□□□ -0.59
LGR5-204	ENST00000547310	SLC4A3	P48751	1232 aa		11.35	□□□□□ -0.59
LGR5-204	ENST00000547310	DACH1	Q9UI36	760 aa		11.35	□□□□□ -0.59
LGR5-204	ENST00000547310	GMPR2	Q9P2T1	348 aa	Known RBP	11.34	□□□□□ -0.59
LGR5-204	ENST00000547310	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.33	□□□□□ -0.6
LGR5-204	ENST00000547310	PPEF1	O14829	653 aa	Predicted RBP	11.33	□□□□□ -0.6
LGR5-204	ENST00000547310	BLOC1S3	Q6QNY0	202 aa		11.33	□□□□□ -0.6
LGR5-204	ENST00000547310	TTC13	Q8NBP0	860 aa		11.32	□□□□□ -0.6
LGR5-204	ENST00000547310	CTC1	Q2NKJ3	1217 aa		11.31	□□□□□ -0.6
LGR5-204	ENST00000547310	WDR70	Q9NW82	654 aa		11.31	□□□□□ -0.6
LGR5-204	ENST00000547310	PKD2L1	Q9P0L9	805 aa		11.31	□□□□□ -0.6
LGR5-204	ENST00000547310	S1PR4	O95977	384 aa		11.3	□□□□□ -0.6
LGR5-204	ENST00000547310	SMCP	P49901	116 aa	Predicted RBP	11.3	□□□□□ -0.6
LGR5-204	ENST00000547310	AXIN1	O15169	862 aa		11.29	□□□□□ -0.6
LGR5-204	ENST00000547310	PRIM1	P49642	420 aa	Known RBP	11.29	□□□□□ -0.6
LGR5-204	ENST00000547310	TLL1	O43897	1013 aa		11.27	□□□□□ -0.61
LGR5-204	ENST00000547310	LCE2C	Q5TA81	110 aa		11.27	□□□□□ -0.61
LGR5-204	ENST00000547310	FAM181B	A6NEQ2	426 aa		11.26	□□□□□ -0.61
LGR5-204	ENST00000547310	TOR4A	Q9NXH8	423 aa		11.26	□□□□□ -0.61
LGR5-204	ENST00000547310	TERT	O14746	1132 aa	Known RBP	11.24	□□□□□ -0.61
LGR5-204	ENST00000547310	E2F4	Q16254	413 aa		11.24	□□□□□ -0.61
LGR5-204	ENST00000547310	PLA2G2C	Q5R387	149 aa		11.24	□□□□□ -0.61
LGR5-204	ENST00000547310	EYA1	Q99502	592 aa		11.23	□□□□□ -0.61
LGR5-204	ENST00000547310	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.23	□□□□□ -0.61
LGR5-204	ENST00000547310	ADH1B	P00325	375 aa		11.22	□□□□□ -0.61
LGR5-204	ENST00000547310	P3H3	Q8IVL6	736 aa		11.22	□□□□□ -0.61
LGR5-204	ENST00000547310	ACTN4	O43707	911 aa	Known RBP	11.2	□□□□□ -0.62
LGR5-204	ENST00000547310	FOXC1	Q12948	553 aa		11.2	□□□□□ -0.62
LGR5-204	ENST00000547310	CDHR5	Q9HBB8	845 aa		11.2	□□□□□ -0.62
LGR5-204	ENST00000547310	OSBP	P22059	807 aa		11.18	□□□□□ -0.62
LGR5-204	ENST00000547310	RPIA	P49247	311 aa		11.18	□□□□□ -0.62
LGR5-204	ENST00000547310	SLC6A16	Q9GZN6	736 aa		11.18	□□□□□ -0.62
LGR5-204	ENST00000547310	PADI6	Q6TGC4	694 aa		11.17	□□□□□ -0.62
LGR5-204	ENST00000547310	ARHGEF1	Q92888	912 aa	Known RBP	11.17	□□□□□ -0.62
LGR5-204	ENST00000547310	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.17	□□□□□ -0.62
LGR5-204	ENST00000547310	GRXCR2	A6NFK2	248 aa		11.16	□□□□□ -0.62
LGR5-204	ENST00000547310	CYP4X1	Q8N118	509 aa		11.16	□□□□□ -0.62
LGR5-204	ENST00000547310	KCNV2	Q8TDN2	545 aa		11.16	□□□□□ -0.62
LGR5-204	ENST00000547310	SUZ12	Q15022	739 aa	Known RBP	11.15	□□□□□ -0.62
LGR5-204	ENST00000547310	KMT5B	Q4FZB7	885 aa		11.15	□□□□□ -0.62
LGR5-204	ENST00000547310	NR1I2	O75469	434 aa		11.14	□□□□□ -0.63
LGR5-204	ENST00000547310	CD2BP2	O95400	341 aa	Known RBP	11.12	□□□□□ -0.63
LGR5-204	ENST00000547310	TRIM47	Q96LD4	638 aa		11.12	□□□□□ -0.63
LGR5-204	ENST00000547310	SENP2	Q9HC62	589 aa		11.12	□□□□□ -0.63
LGR5-204	ENST00000547310	SNRPB	P14678	240 aa	Known RBP	11.11	□□□□□ -0.63
LGR5-204	ENST00000547310	ATP13A2	Q9NQ11	1180 aa		11.11	□□□□□ -0.63
LGR5-204	ENST00000547310	LOR	P23490	312 aa	Predicted RBP	11.1	□□□□□ -0.63
LGR5-204	ENST00000547310	DNAJB2	P25686	324 aa		11.08	□□□□□ -0.64
LGR5-204	ENST00000547310	ZSCAN1	Q8NBB4	408 aa		11.08	□□□□□ -0.64
LGR5-204	ENST00000547310	SCUBE3	Q8IX30	993 aa		11.06	□□□□□ -0.64
LGR5-204	ENST00000547310	SLC16A10	Q8TF71	515 aa		11.05	□□□□□ -0.64
LGR5-204	ENST00000547310	KIFC2	Q96AC6	838 aa		11.05	□□□□□ -0.64
LGR5-204	ENST00000547310	TMEM134	Q9H6X4	195 aa		11.05	□□□□□ -0.64
LGR5-204	ENST00000547310	CFH	P08603	1231 aa		11.04	□□□□□ -0.64
LGR5-204	ENST00000547310	TTC24	A2A3L6	582 aa	Predicted RBP	11.02	□□□□□ -0.65
LGR5-204	ENST00000547310	SPSB2	Q99619	263 aa		11.02	□□□□□ -0.65
LGR5-204	ENST00000547310	SMPD1	P17405	629 aa		11	□□□□□ -0.65
LGR5-204	ENST00000547310	NPAS3	Q8IXF0	933 aa		10.99	□□□□□ -0.65
LGR5-204	ENST00000547310	GMPR	P36959	345 aa		10.98	□□□□□ -0.65
LGR5-204	ENST00000547310	SNIP1	Q8TAD8	396 aa	Known RBP	10.98	□□□□□ -0.65
LGR5-204	ENST00000547310	RBM46	Q8TBY0	533 aa	Known RBP	10.98	□□□□□ -0.65
LGR5-204	ENST00000547310	BCAN	Q96GW7	911 aa		10.98	□□□□□ -0.65
LGR5-204	ENST00000547310	SLC10A3	P09131	477 aa		10.97	□□□□□ -0.65
LGR5-204	ENST00000547310	NXF1	Q9UBU9	619 aa	Known RBP	10.97	□□□□□ -0.65
LGR5-204	ENST00000547310	IRF7	Q92985	503 aa		10.95	□□□□□ -0.66
LGR5-204	ENST00000547310	FCF1	Q9Y324	198 aa	Known RBP	10.95	□□□□□ -0.66
LGR5-204	ENST00000547310	TESPA1	A2RU30	521 aa	Predicted RBP	10.94	□□□□□ -0.66
LGR5-204	ENST00000547310	WNT7A	O00755	349 aa		10.94	□□□□□ -0.66
LGR5-204	ENST00000547310	RCCD1	A6NED2	376 aa		10.93	□□□□□ -0.66
LGR5-204	ENST00000547310	SEMA3E	O15041	775 aa		10.92	□□□□□ -0.66
LGR5-204	ENST00000547310	ADGRG1	Q9Y653	693 aa		10.91	□□□□□ -0.66
LGR5-204	ENST00000547310	ZBTB24	O43167	697 aa	Predicted RBP	10.88	□□□□□ -0.67
LGR5-204	ENST00000547310	THAP11	Q96EK4	314 aa		10.88	□□□□□ -0.67
LGR5-204	ENST00000547310	PUS10	Q3MIT2	529 aa	Known RBP	10.87	□□□□□ -0.67
LGR5-204	ENST00000547310	SMYD5	Q6GMV2	418 aa		10.87	□□□□□ -0.67

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