RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 GLIPR1L2Q4G1C9 344 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 PTPRTO14522 1441 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 DEPDC5O75140 1603 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 ZCCHC11Q5TAX3 1644 aaKnown RBP18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 NBPF1Q3BBV0 1214 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
SLC38A1-204ENST00000546893 WDR7Q9Y4E6 1490 aa18.08■□□□□ 0.49
SLC38A1-204ENST00000546893 CEP152O94986 1710 aa18.08■□□□□ 0.49
SLC38A1-204ENST00000546893 SPHKAPQ2M3C7 1700 aa18.08■□□□□ 0.49
SLC38A1-204ENST00000546893 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
SLC38A1-204ENST00000546893 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
SLC38A1-204ENST00000546893 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.06■□□□□ 0.48
SLC38A1-204ENST00000546893 SCAF11Q99590 1463 aaKnown RBP18.06■□□□□ 0.48
SLC38A1-204ENST00000546893 TET3O43151 1660 aa18.05■□□□□ 0.48
SLC38A1-204ENST00000546893 PANK3Q9H999 370 aa18.05■□□□□ 0.48
SLC38A1-204ENST00000546893 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
SLC38A1-204ENST00000546893 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
SLC38A1-204ENST00000546893 KANK1Q14678 1352 aa18.03■□□□□ 0.48
SLC38A1-204ENST00000546893 PIK3C2GO75747 1445 aa18.03■□□□□ 0.48
SLC38A1-204ENST00000546893 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
SLC38A1-204ENST00000546893 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
SLC38A1-204ENST00000546893 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
SLC38A1-204ENST00000546893 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
SLC38A1-204ENST00000546893 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
SLC38A1-204ENST00000546893 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
SLC38A1-204ENST00000546893 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
SLC38A1-204ENST00000546893 MYOM2P54296 1465 aa17.98■□□□□ 0.47
SLC38A1-204ENST00000546893 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
SLC38A1-204ENST00000546893 INO80Q9ULG1 1556 aaPredicted RBP17.97■□□□□ 0.47
SLC38A1-204ENST00000546893 GSE1Q14687 1217 aa17.97■□□□□ 0.47
SLC38A1-204ENST00000546893 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
SLC38A1-204ENST00000546893 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.97■□□□□ 0.47
SLC38A1-204ENST00000546893 ABCA9Q8IUA7 1624 aa17.96■□□□□ 0.46
SLC38A1-204ENST00000546893 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
SLC38A1-204ENST00000546893 FAM43AQ8N2R8 423 aa17.95■□□□□ 0.46
SLC38A1-204ENST00000546893 CLTCL1P53675 1640 aa17.95■□□□□ 0.46
SLC38A1-204ENST00000546893 KDM5AP29375 1690 aaKnown RBP17.95■□□□□ 0.46
SLC38A1-204ENST00000546893 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
SLC38A1-204ENST00000546893 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
SLC38A1-204ENST00000546893 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
SLC38A1-204ENST00000546893 BACH2Q9BYV9 841 aa17.92■□□□□ 0.46
SLC38A1-204ENST00000546893 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
SLC38A1-204ENST00000546893 DDRGK1Q96HY6 314 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 PPM1GO15355 546 aaPredicted RBP17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 PDE4AP27815 886 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 LMTK2Q8IWU2 1503 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 ZNF521Q96K83 1311 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 MYOM1P52179 1685 aa17.9■□□□□ 0.46
SLC38A1-204ENST00000546893 MYO3AQ8NEV4 1616 aa17.89■□□□□ 0.45
SLC38A1-204ENST00000546893 GOLGA2Q08379 1002 aa17.88■□□□□ 0.45
SLC38A1-204ENST00000546893 CDCA7LQ96GN5 454 aa17.88■□□□□ 0.45
SLC38A1-204ENST00000546893 ADAMTS8Q9UP79 889 aa17.88■□□□□ 0.45
SLC38A1-204ENST00000546893 FRAT1Q92837 279 aaPredicted RBP17.88■□□□□ 0.45
SLC38A1-204ENST00000546893 FANCAO15360 1455 aa17.88■□□□□ 0.45
SLC38A1-204ENST00000546893 CENPQQ7L2Z9 268 aaPredicted RBP17.87■□□□□ 0.45
SLC38A1-204ENST00000546893 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
SLC38A1-204ENST00000546893 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
SLC38A1-204ENST00000546893 NINLQ9Y2I6 1382 aa17.86■□□□□ 0.45
SLC38A1-204ENST00000546893 KIF1BO60333 1816 aa17.86■□□□□ 0.45
SLC38A1-204ENST00000546893 EFCAB6Q5THR3 1501 aa17.85■□□□□ 0.45
SLC38A1-204ENST00000546893 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
SLC38A1-204ENST00000546893 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
SLC38A1-204ENST00000546893 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.45
SLC38A1-204ENST00000546893 CRBNQ96SW2 442 aa17.83■□□□□ 0.45
SLC38A1-204ENST00000546893 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.44
SLC38A1-204ENST00000546893 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.44
SLC38A1-204ENST00000546893 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
SLC38A1-204ENST00000546893 KDM2BQ8NHM5 1336 aa17.82■□□□□ 0.44
SLC38A1-204ENST00000546893 ABCA6Q8N139 1617 aa17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 SLFN5Q08AF3 891 aa17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 CFAP74Q9C0B2 1584 aa17.81■□□□□ 0.44
SLC38A1-204ENST00000546893 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
SLC38A1-204ENST00000546893 ERVK-7P63135 1459 aa17.8■□□□□ 0.44
SLC38A1-204ENST00000546893 E9PSI1 815 aa17.8■□□□□ 0.44
SLC38A1-204ENST00000546893 AAMPQ13685 434 aa17.8■□□□□ 0.44
SLC38A1-204ENST00000546893 POLR3AO14802 1390 aaPredicted RBP17.79■□□□□ 0.44
SLC38A1-204ENST00000546893 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
SLC38A1-204ENST00000546893 RIMBP3CA6NJZ7 1639 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 RIMBP3BA6NNM3 1639 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 RIMBP3Q9UFD9 1639 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 ASXL2Q76L83 1435 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 ZNF518AQ6AHZ1 1483 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 ADGRB3O60242 1522 aa17.78■□□□□ 0.44
SLC38A1-204ENST00000546893 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
SLC38A1-204ENST00000546893 SENP3-EIF4A1A0A087X0R7 540 aa17.77■□□□□ 0.43
SLC38A1-204ENST00000546893 NFKBIBQ15653 356 aa17.77■□□□□ 0.43
SLC38A1-204ENST00000546893 USP32Q8NFA0 1604 aa17.77■□□□□ 0.43
SLC38A1-204ENST00000546893 KIF3BO15066 747 aa17.76■□□□□ 0.43
SLC38A1-204ENST00000546893 HSP90AA2PQ14568 343 aaPredicted RBP17.76■□□□□ 0.43
SLC38A1-204ENST00000546893 RPGRIP1LQ68CZ1 1315 aa17.76■□□□□ 0.43
SLC38A1-204ENST00000546893 A0A0U1RQG5 324 aaPredicted RBP17.75■□□□□ 0.43
SLC38A1-204ENST00000546893 RRP9O43818 475 aaKnown RBP17.75■□□□□ 0.43
SLC38A1-204ENST00000546893 PLIN1O60240 522 aa17.75■□□□□ 0.43
SLC38A1-204ENST00000546893 RBM10P98175 930 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms