RNA–Protein interactions for RNA: ENST00000546471.5

RRN3P1-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best)

Gene RRN3P1, Length 2,608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-202ENST00000546471 ASXL1Q8IXJ9 1541 aa12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 SCAF11Q99590 1463 aaKnown RBP12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 SKAP1Q86WV1 359 aa12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 PIK3C2GO75747 1445 aa12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
RRN3P1-202ENST00000546471 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
RRN3P1-202ENST00000546471 TRPM2O94759 1503 aa12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 PLCH2O75038 1416 aa12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 SPHKAPQ2M3C7 1700 aa12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 SHROOM2Q13796 1616 aa12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
RRN3P1-202ENST00000546471 EFCAB2Q5VUJ9 269 aa12.29□□□□□ -0.44
RRN3P1-202ENST00000546471 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
RRN3P1-202ENST00000546471 ABCC1P33527 1531 aa12.29□□□□□ -0.44
RRN3P1-202ENST00000546471 CEP152O94986 1710 aa12.28□□□□□ -0.44
RRN3P1-202ENST00000546471 SLFN5Q08AF3 891 aa12.28□□□□□ -0.44
RRN3P1-202ENST00000546471 CHD1O14646 1710 aa12.28□□□□□ -0.44
RRN3P1-202ENST00000546471 MYOM1P52179 1685 aa12.26□□□□□ -0.45
RRN3P1-202ENST00000546471 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
RRN3P1-202ENST00000546471 PTPRTO14522 1441 aa12.26□□□□□ -0.45
RRN3P1-202ENST00000546471 TRAPPC8Q9Y2L5 1435 aa12.26□□□□□ -0.45
RRN3P1-202ENST00000546471 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
RRN3P1-202ENST00000546471 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
RRN3P1-202ENST00000546471 SPAG9O60271 1321 aaKnown RBP12.25□□□□□ -0.45
RRN3P1-202ENST00000546471 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
RRN3P1-202ENST00000546471 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
RRN3P1-202ENST00000546471 CLTCL1P53675 1640 aa12.25□□□□□ -0.45
RRN3P1-202ENST00000546471 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
RRN3P1-202ENST00000546471 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
RRN3P1-202ENST00000546471 E9PSI1 815 aa12.24□□□□□ -0.45
RRN3P1-202ENST00000546471 NGEFQ8N5V2 710 aa12.24□□□□□ -0.45
RRN3P1-202ENST00000546471 KIAA1210Q9ULL0 1709 aa12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 ZCCHC11Q5TAX3 1644 aaKnown RBP12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 ZFYVE16Q7Z3T8 1539 aa12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 TET3O43151 1660 aa12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 NFKBIBQ15653 356 aa12.23□□□□□ -0.45
RRN3P1-202ENST00000546471 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
RRN3P1-202ENST00000546471 KANK1Q14678 1352 aa12.22□□□□□ -0.45
RRN3P1-202ENST00000546471 APAF1O14727 1248 aa12.22□□□□□ -0.45
RRN3P1-202ENST00000546471 RGS3P49796 1198 aa12.22□□□□□ -0.45
RRN3P1-202ENST00000546471 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
RRN3P1-202ENST00000546471 GSE1Q14687 1217 aa12.21□□□□□ -0.45
RRN3P1-202ENST00000546471 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
RRN3P1-202ENST00000546471 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
RRN3P1-202ENST00000546471 NINLQ9Y2I6 1382 aa12.2□□□□□ -0.46
RRN3P1-202ENST00000546471 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
RRN3P1-202ENST00000546471 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
RRN3P1-202ENST00000546471 ARAP3Q8WWN8 1544 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 BCAR3O75815 825 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 MYOM2P54296 1465 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
RRN3P1-202ENST00000546471 PDE3AQ14432 1141 aa12.18□□□□□ -0.46
RRN3P1-202ENST00000546471 MAP3K4Q9Y6R4 1608 aa12.18□□□□□ -0.46
RRN3P1-202ENST00000546471 VWDEQ8N2E2 1590 aa12.17□□□□□ -0.46
RRN3P1-202ENST00000546471 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
RRN3P1-202ENST00000546471 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
RRN3P1-202ENST00000546471 ABCA6Q8N139 1617 aa12.17□□□□□ -0.46
RRN3P1-202ENST00000546471 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
RRN3P1-202ENST00000546471 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
RRN3P1-202ENST00000546471 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
RRN3P1-202ENST00000546471 POLR3AO14802 1390 aaPredicted RBP12.16□□□□□ -0.46
RRN3P1-202ENST00000546471 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
RRN3P1-202ENST00000546471 INO80Q9ULG1 1556 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-202ENST00000546471 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.46
RRN3P1-202ENST00000546471 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
RRN3P1-202ENST00000546471 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 IGHDP01880 384 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 SBNO2Q9Y2G9 1366 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 KIF3BO15066 747 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 WWC1Q8IX03 1113 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
RRN3P1-202ENST00000546471 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
RRN3P1-202ENST00000546471 KIF1BO60333 1816 aa12.13□□□□□ -0.47
RRN3P1-202ENST00000546471 UGGT1Q9NYU2 1555 aa12.12□□□□□ -0.47
RRN3P1-202ENST00000546471 AAMPQ13685 434 aa12.12□□□□□ -0.47
RRN3P1-202ENST00000546471 COG6Q9Y2V7 657 aa12.12□□□□□ -0.47
RRN3P1-202ENST00000546471 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 FANCAO15360 1455 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 BECN1Q14457 450 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 MORC1Q86VD1 984 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 NRXN1Q9ULB1 1477 aa12.11□□□□□ -0.47
RRN3P1-202ENST00000546471 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 BRPF3Q9ULD4 1205 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 MROH1Q8NDA8 1641 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 PMFBP1Q8TBY8 1022 aa12.1□□□□□ -0.47
RRN3P1-202ENST00000546471 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms