RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PDE4AP27815 886 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 PARD3Q8TEW0 1356 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 A2MP01023 1474 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 FRAT2O75474 233 aaPredicted RBP10.32□□□□□ -0.76
UBR1-202ENST00000546274 TMC1Q8TDI8 760 aa10.32□□□□□ -0.76
UBR1-202ENST00000546274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.31□□□□□ -0.76
UBR1-202ENST00000546274 GPRASP1Q5JY77 1395 aa10.31□□□□□ -0.76
UBR1-202ENST00000546274 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
UBR1-202ENST00000546274 COL17A1Q9UMD9 1497 aaPredicted RBP10.3□□□□□ -0.76
UBR1-202ENST00000546274 FAM69CQ0P6D2 419 aa10.3□□□□□ -0.76
UBR1-202ENST00000546274 RALBP1Q15311 655 aa10.3□□□□□ -0.76
UBR1-202ENST00000546274 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
UBR1-202ENST00000546274 CCDC144AA2RUR9 1427 aa10.29□□□□□ -0.76
UBR1-202ENST00000546274 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
UBR1-202ENST00000546274 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
UBR1-202ENST00000546274 ABCA9Q8IUA7 1624 aa10.28□□□□□ -0.76
UBR1-202ENST00000546274 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
UBR1-202ENST00000546274 ARHGAP5Q13017 1502 aa10.28□□□□□ -0.76
UBR1-202ENST00000546274 DISP3Q9P2K9 1392 aa10.27□□□□□ -0.77
UBR1-202ENST00000546274 ATP10AO60312 1499 aa10.27□□□□□ -0.77
UBR1-202ENST00000546274 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
UBR1-202ENST00000546274 PRDM4Q9UKN5 801 aa10.27□□□□□ -0.77
UBR1-202ENST00000546274 PPRC1Q5VV67 1664 aaKnown RBP10.26□□□□□ -0.77
UBR1-202ENST00000546274 ADRA2BP18089 450 aa10.26□□□□□ -0.77
UBR1-202ENST00000546274 TESK2Q96S53 571 aa10.26□□□□□ -0.77
UBR1-202ENST00000546274 ZMYM4Q5VZL5 1548 aa10.26□□□□□ -0.77
UBR1-202ENST00000546274 PLEKHH2Q8IVE3 1493 aa10.26□□□□□ -0.77
UBR1-202ENST00000546274 IQGAP1P46940 1657 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 RSPH4AQ5TD94 716 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 TSPOAP1O95153 1857 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 BLMP54132 1417 aaPredicted RBP10.25□□□□□ -0.77
UBR1-202ENST00000546274 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
UBR1-202ENST00000546274 BACH2Q9BYV9 841 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 NLRP13Q86W25 1043 aa10.25□□□□□ -0.77
UBR1-202ENST00000546274 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
UBR1-202ENST00000546274 CFAP74Q9C0B2 1584 aa10.24□□□□□ -0.77
UBR1-202ENST00000546274 MADDQ8WXG6 1647 aa10.24□□□□□ -0.77
UBR1-202ENST00000546274 POGKQ9P215 609 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 ERBINQ96RT1 1412 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 CEP152O94986 1710 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 SPHKAPQ2M3C7 1700 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 TCERG1O14776 1098 aaKnown RBP10.23□□□□□ -0.77
UBR1-202ENST00000546274 RGL3Q3MIN7 710 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 INSRP06213 1382 aa10.23□□□□□ -0.77
UBR1-202ENST00000546274 CD109Q6YHK3 1445 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 CALD1Q05682 793 aaKnown RBP10.22□□□□□ -0.77
UBR1-202ENST00000546274 NAP1L2Q9ULW6 460 aaPredicted RBP10.22□□□□□ -0.77
UBR1-202ENST00000546274 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
UBR1-202ENST00000546274 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 MYOM1P52179 1685 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 SKAP1Q86WV1 359 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 ARID3AQ99856 593 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
UBR1-202ENST00000546274 ABCC1P33527 1531 aa10.21□□□□□ -0.78
UBR1-202ENST00000546274 CDCA7LQ96GN5 454 aa10.21□□□□□ -0.78
UBR1-202ENST00000546274 PDCL3Q9H2J4 239 aa10.21□□□□□ -0.78
UBR1-202ENST00000546274 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
UBR1-202ENST00000546274 PDE3BQ13370 1112 aa10.2□□□□□ -0.78
UBR1-202ENST00000546274 ZHX1Q9UKY1 873 aaPredicted RBP10.2□□□□□ -0.78
UBR1-202ENST00000546274 CLCN1P35523 988 aa10.2□□□□□ -0.78
UBR1-202ENST00000546274 NEO1Q92859 1461 aa10.2□□□□□ -0.78
UBR1-202ENST00000546274 DEPDC5O75140 1603 aa10.19□□□□□ -0.78
UBR1-202ENST00000546274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBR1-202ENST00000546274 TAF7LQ5H9L4 462 aa10.19□□□□□ -0.78
UBR1-202ENST00000546274 CC2D1BQ5T0F9 858 aaKnown RBP10.18□□□□□ -0.78
UBR1-202ENST00000546274 PANK3Q9H999 370 aa10.18□□□□□ -0.78
UBR1-202ENST00000546274 TRPM2O94759 1503 aa10.18□□□□□ -0.78
UBR1-202ENST00000546274 SYNMO15061 1565 aa10.18□□□□□ -0.78
UBR1-202ENST00000546274 CLTCL1P53675 1640 aa10.18□□□□□ -0.78
UBR1-202ENST00000546274 L1TD1Q5T7N2 865 aaKnown RBP10.17□□□□□ -0.78
UBR1-202ENST00000546274 PLCH2O75038 1416 aa10.17□□□□□ -0.78
UBR1-202ENST00000546274 PANK2Q9BZ23 570 aa10.16□□□□□ -0.78
UBR1-202ENST00000546274 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
UBR1-202ENST00000546274 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
UBR1-202ENST00000546274 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
UBR1-202ENST00000546274 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
UBR1-202ENST00000546274 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
UBR1-202ENST00000546274 KIAA1210Q9ULL0 1709 aa10.15□□□□□ -0.78
UBR1-202ENST00000546274 TMF1P82094 1093 aa10.15□□□□□ -0.79
UBR1-202ENST00000546274 TET3O43151 1660 aa10.15□□□□□ -0.79
UBR1-202ENST00000546274 PLIN1O60240 522 aa10.14□□□□□ -0.79
UBR1-202ENST00000546274 GZF1Q9H116 711 aaPredicted RBP10.14□□□□□ -0.79
UBR1-202ENST00000546274 PRDM10Q9NQV6 1147 aa10.14□□□□□ -0.79
UBR1-202ENST00000546274 VWDEQ8N2E2 1590 aa10.14□□□□□ -0.79
UBR1-202ENST00000546274 PTPRTO14522 1441 aa10.14□□□□□ -0.79
UBR1-202ENST00000546274 XRCC6P12956 609 aaKnown RBP eCLIP10.13□□□□□ -0.79
UBR1-202ENST00000546274 SCAPERQ9BY12 1400 aa10.13□□□□□ -0.79
UBR1-202ENST00000546274 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
UBR1-202ENST00000546274 PLCD3Q8N3E9 789 aa10.13□□□□□ -0.79
UBR1-202ENST00000546274 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
UBR1-202ENST00000546274 PLEKHH1Q9ULM0 1364 aa10.13□□□□□ -0.79
UBR1-202ENST00000546274 KDM5AP29375 1690 aaKnown RBP10.13□□□□□ -0.79
UBR1-202ENST00000546274 MS4A1P11836 297 aa10.12□□□□□ -0.79
UBR1-202ENST00000546274 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
UBR1-202ENST00000546274 INO80Q9ULG1 1556 aaPredicted RBP10.12□□□□□ -0.79
UBR1-202ENST00000546274 FANCAO15360 1455 aa10.12□□□□□ -0.79
UBR1-202ENST00000546274 SCAF11Q99590 1463 aaKnown RBP10.12□□□□□ -0.79
UBR1-202ENST00000546274 STAC3Q96MF2 364 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms