RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 AHDC1Q5TGY3 1603 aaPredicted RBP28.31■■■□□ 2.12
C12orf43-209ENST00000546272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.12
C12orf43-209ENST00000546272 KANK1Q14678 1352 aa28.29■■■□□ 2.12
C12orf43-209ENST00000546272 KIF15Q9NS87 1388 aa28.29■■■□□ 2.12
C12orf43-209ENST00000546272 NCOA3Q9Y6Q9 1424 aa28.29■■■□□ 2.12
C12orf43-209ENST00000546272 ADGRB3O60242 1522 aa28.28■■■□□ 2.12
C12orf43-209ENST00000546272 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
C12orf43-209ENST00000546272 CADPS2Q86UW7 1296 aa28.23■■■□□ 2.11
C12orf43-209ENST00000546272 LMTK2Q8IWU2 1503 aa28.23■■■□□ 2.11
C12orf43-209ENST00000546272 C14orf37Q86TY3 774 aa28.22■■■□□ 2.11
C12orf43-209ENST00000546272 NOS1P29475 1434 aa28.21■■■□□ 2.11
C12orf43-209ENST00000546272 PLEKHG1Q9ULL1 1385 aa28.21■■■□□ 2.11
C12orf43-209ENST00000546272 AFF2P51816 1311 aa28.21■■■□□ 2.11
C12orf43-209ENST00000546272 RRP7BPQ9NSQ0 103 aa28.21■■■□□ 2.11
C12orf43-209ENST00000546272 NUTM2BA6NNL0 878 aaPredicted RBP28.2■■■□□ 2.11
C12orf43-209ENST00000546272 NUTM2EB1AL46 878 aaPredicted RBP28.2■■■□□ 2.11
C12orf43-209ENST00000546272 NUTM2AQ8IVF1 878 aaPredicted RBP28.2■■■□□ 2.11
C12orf43-209ENST00000546272 SLC52A1Q9NWF4 448 aa28.2■■■□□ 2.11
C12orf43-209ENST00000546272 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.2■■■□□ 2.1
C12orf43-209ENST00000546272 DIP2AQ14689 1571 aa28.19■■■□□ 2.1
C12orf43-209ENST00000546272 ATF3P18847 181 aa28.18■■■□□ 2.1
C12orf43-209ENST00000546272 C19orf44Q9H6X5 657 aa28.18■■■□□ 2.1
C12orf43-209ENST00000546272 CROCC2H7BZ55 1655 aa28.16■■■□□ 2.1
C12orf43-209ENST00000546272 RGS12O14924 1447 aa28.16■■■□□ 2.1
C12orf43-209ENST00000546272 ZFYVE9O95405 1425 aa28.16■■■□□ 2.1
C12orf43-209ENST00000546272 HDGFP51858 240 aaKnown RBP28.16■■■□□ 2.1
C12orf43-209ENST00000546272 TBX22Q9Y458 520 aa28.16■■■□□ 2.1
C12orf43-209ENST00000546272 PPP1R15AO75807 674 aaPredicted RBP28.15■■■□□ 2.1
C12orf43-209ENST00000546272 RBM6P78332 1123 aaKnown RBP28.13■■■□□ 2.09
C12orf43-209ENST00000546272 MYO5BQ9ULV0 1848 aa28.12■■■□□ 2.09
C12orf43-209ENST00000546272 BRINP3Q76B58 766 aa28.12■■■□□ 2.09
C12orf43-209ENST00000546272 NUTM2DQ5VT03 806 aaPredicted RBP28.11■■■□□ 2.09
C12orf43-209ENST00000546272 QTRT2Q9H974 415 aaKnown RBP28.11■■■□□ 2.09
C12orf43-209ENST00000546272 ABCC5O15440 1437 aa28.1■■■□□ 2.09
C12orf43-209ENST00000546272 RIMS2Q9UQ26 1411 aa28.1■■■□□ 2.09
C12orf43-209ENST00000546272 FOXD1Q16676 465 aa28.1■■■□□ 2.09
C12orf43-209ENST00000546272 SETD5Q9C0A6 1442 aa28.08■■■□□ 2.09
C12orf43-209ENST00000546272 GCC2Q8IWJ2 1684 aa28.06■■■□□ 2.08
C12orf43-209ENST00000546272 PIK3R4Q99570 1358 aa28.05■■■□□ 2.08
C12orf43-209ENST00000546272 C8orf37Q96NL8 207 aa28.05■■■□□ 2.08
C12orf43-209ENST00000546272 ZRANB1Q9UGI0 708 aa28.05■■■□□ 2.08
C12orf43-209ENST00000546272 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
C12orf43-209ENST00000546272 RPRD2Q5VT52 1461 aaKnown RBP28.03■■■□□ 2.08
C12orf43-209ENST00000546272 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
C12orf43-209ENST00000546272 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
C12orf43-209ENST00000546272 KANK4Q5T7N3 995 aaPredicted RBP28.02■■■□□ 2.08
C12orf43-209ENST00000546272 LRRC59Q96AG4 307 aaKnown RBP28.02■■■□□ 2.08
C12orf43-209ENST00000546272 TMEM131LA2VDJ0 1609 aa28.02■■■□□ 2.08
C12orf43-209ENST00000546272 ADAMTS13Q76LX8 1427 aa28.02■■■□□ 2.08
C12orf43-209ENST00000546272 NGLY1Q96IV0 654 aa28.01■■■□□ 2.07
C12orf43-209ENST00000546272 DCCP43146 1447 aa28.01■■■□□ 2.07
C12orf43-209ENST00000546272 DAPK1P53355 1430 aa28.01■■■□□ 2.07
C12orf43-209ENST00000546272 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
C12orf43-209ENST00000546272 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
C12orf43-209ENST00000546272 PTPN23Q9H3S7 1636 aa27.97■■■□□ 2.07
C12orf43-209ENST00000546272 VPS8Q8N3P4 1428 aa27.96■■■□□ 2.07
C12orf43-209ENST00000546272 PNPLA6Q8IY17 1366 aa27.95■■■□□ 2.06
C12orf43-209ENST00000546272 AMOTL2Q9Y2J4 779 aa27.94■■■□□ 2.06
C12orf43-209ENST00000546272 SETBP1Q9Y6X0 1596 aa27.94■■■□□ 2.06
C12orf43-209ENST00000546272 TRPM2O94759 1503 aa27.94■■■□□ 2.06
C12orf43-209ENST00000546272 CHIC2Q9UKJ5 165 aa27.92■■■□□ 2.06
C12orf43-209ENST00000546272 MST1RQ04912 1400 aa27.92■■■□□ 2.06
C12orf43-209ENST00000546272 CHGAP10645 457 aaKnown RBP27.91■■■□□ 2.06
C12orf43-209ENST00000546272 PTPRUQ92729 1446 aa27.9■■■□□ 2.06
C12orf43-209ENST00000546272 ADAMTS2O95450 1211 aa27.87■■■□□ 2.05
C12orf43-209ENST00000546272 CCDC125Q86Z20 511 aa27.86■■■□□ 2.05
C12orf43-209ENST00000546272 TRPC5Q9UL62 973 aaPredicted RBP27.85■■■□□ 2.05
C12orf43-209ENST00000546272 DDX17Q92841 729 aaKnown RBP27.84■■■□□ 2.05
C12orf43-209ENST00000546272 USP21Q9UK80 565 aa27.84■■■□□ 2.05
C12orf43-209ENST00000546272 EP400Q96L91 3159 aa27.83■■■□□ 2.05
C12orf43-209ENST00000546272 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
C12orf43-209ENST00000546272 UNC13BO14795 1591 aa27.82■■■□□ 2.04
C12orf43-209ENST00000546272 ADGRL2O95490 1459 aa27.78■■■□□ 2.04
C12orf43-209ENST00000546272 FNBP4Q8N3X1 1017 aaPredicted RBP27.77■■■□□ 2.04
C12orf43-209ENST00000546272 ANKRD50Q9ULJ7 1429 aa27.77■■■□□ 2.04
C12orf43-209ENST00000546272 ATRNO75882 1429 aa27.76■■■□□ 2.03
C12orf43-209ENST00000546272 ADGRL3Q9HAR2 1447 aa27.75■■■□□ 2.03
C12orf43-209ENST00000546272 PTCH1Q13635 1447 aa27.74■■■□□ 2.03
C12orf43-209ENST00000546272 LAMC1P11047 1609 aa27.72■■■□□ 2.03
C12orf43-209ENST00000546272 E9PCH4 1651 aa27.72■■■□□ 2.03
C12orf43-209ENST00000546272 NRXN3Q9Y4C0 1643 aa27.72■■■□□ 2.03
C12orf43-209ENST00000546272 NALCNQ8IZF0 1738 aa27.7■■■□□ 2.02
C12orf43-209ENST00000546272 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
C12orf43-209ENST00000546272 C1orf167Q5SNV9 1468 aa27.68■■■□□ 2.02
C12orf43-209ENST00000546272 METP08581 1390 aa27.65■■■□□ 2.02
C12orf43-209ENST00000546272 LRP5O75197 1615 aa27.64■■■□□ 2.02
C12orf43-209ENST00000546272 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
C12orf43-209ENST00000546272 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
C12orf43-209ENST00000546272 IQGAP3Q86VI3 1631 aa27.62■■■□□ 2.01
C12orf43-209ENST00000546272 BCL9LQ86UU0 1499 aa27.62■■■□□ 2.01
C12orf43-209ENST00000546272 APLP2Q06481 763 aa27.61■■■□□ 2.01
C12orf43-209ENST00000546272 GJD4Q96KN9 370 aaPredicted RBP27.6■■■□□ 2.01
C12orf43-209ENST00000546272 ORAI2Q96SN7 254 aa27.59■■■□□ 2.01
C12orf43-209ENST00000546272 MARF1Q9Y4F3 1742 aaKnown RBP27.57■■■□□ 2
C12orf43-209ENST00000546272 MYOM2P54296 1465 aa27.57■■■□□ 2
C12orf43-209ENST00000546272 DEFB132Q7Z7B7 95 aa27.53■■■□□ 2
C12orf43-209ENST00000546272 SF3B2Q13435 895 aaKnown RBP27.52■■■□□ 2
C12orf43-209ENST00000546272 FAM50AQ14320 339 aaKnown RBP27.52■■■□□ 2
C12orf43-209ENST00000546272 ZNF326Q5BKZ1 582 aaKnown RBP27.52■■■□□ 2
C12orf43-209ENST00000546272 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms