RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
CLPTM1-203ENST00000546079 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.39■■□□□ 1.01
CLPTM1-203ENST00000546079 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
CLPTM1-203ENST00000546079 USP19O94966 1318 aa21.38■■□□□ 1.01
CLPTM1-203ENST00000546079 RGS3P49796 1198 aa21.37■■□□□ 1.01
CLPTM1-203ENST00000546079 ZFYVE16Q7Z3T8 1539 aa21.37■■□□□ 1.01
CLPTM1-203ENST00000546079 BECN1Q14457 450 aa21.37■■□□□ 1.01
CLPTM1-203ENST00000546079 ASXL2Q76L83 1435 aa21.36■■□□□ 1.01
CLPTM1-203ENST00000546079 PLA2R1Q13018 1463 aa21.36■■□□□ 1.01
CLPTM1-203ENST00000546079 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
CLPTM1-203ENST00000546079 RTEL1-TNFRSF6BF6WH68 1400 aa21.35■■□□□ 1.01
CLPTM1-203ENST00000546079 CLCN1P35523 988 aa21.35■■□□□ 1.01
CLPTM1-203ENST00000546079 RRP9O43818 475 aaKnown RBP21.34■■□□□ 1.01
CLPTM1-203ENST00000546079 FANCAO15360 1455 aa21.34■■□□□ 1.01
CLPTM1-203ENST00000546079 ZMYND15Q9H091 742 aa21.33■■□□□ 1.01
CLPTM1-203ENST00000546079 PNNQ9H307 717 aaKnown RBP21.33■■□□□ 1
CLPTM1-203ENST00000546079 AFAP1Q8N556 730 aa21.32■■□□□ 1
CLPTM1-203ENST00000546079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■□□□ 11.9
CLPTM1-203ENST00000546079 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
CLPTM1-203ENST00000546079 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
CLPTM1-203ENST00000546079 CCDC144AA2RUR9 1427 aa21.31■■□□□ 1
CLPTM1-203ENST00000546079 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
CLPTM1-203ENST00000546079 SPAG9O60271 1321 aaKnown RBP21.31■■□□□ 1
CLPTM1-203ENST00000546079 HSP90AA2PQ14568 343 aaPredicted RBP21.3■■□□□ 1
CLPTM1-203ENST00000546079 KDM2AQ9Y2K7 1162 aa21.3■■□□□ 1
CLPTM1-203ENST00000546079 EIF3AQ14152 1382 aaKnown RBP21.3■■□□□ 1
CLPTM1-203ENST00000546079 FSD2A1L4K1 749 aa21.29■■□□□ 1
CLPTM1-203ENST00000546079 NAP1L5Q96NT1 182 aaPredicted RBP21.29■■□□□ 1
CLPTM1-203ENST00000546079 ATP10AO60312 1499 aa21.29■■□□□ 1
CLPTM1-203ENST00000546079 XRCC6P12956 609 aaKnown RBP eCLIP21.29■■□□□ 1
CLPTM1-203ENST00000546079 ZNF521Q96K83 1311 aa21.29■■□□□ 1
CLPTM1-203ENST00000546079 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
CLPTM1-203ENST00000546079 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
CLPTM1-203ENST00000546079 ADAMTS8Q9UP79 889 aa21.27■■□□□ 1
CLPTM1-203ENST00000546079 ATP7AQ04656 1500 aa21.27■■□□□ 1
CLPTM1-203ENST00000546079 GOLGA6L3A6NEY3 463 aa21.27■□□□□ 0.99
CLPTM1-203ENST00000546079 GOLGA2Q08379 1002 aa21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 PLEKHH1Q9ULM0 1364 aa21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 DEPDC5O75140 1603 aa21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 SLKQ9H2G2 1235 aaPredicted RBP21.26■□□□□ 0.99
CLPTM1-203ENST00000546079 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
CLPTM1-203ENST00000546079 SCAPERQ9BY12 1400 aa21.24■□□□□ 0.99
CLPTM1-203ENST00000546079 COL17A1Q9UMD9 1497 aaPredicted RBP21.23■□□□□ 0.99
CLPTM1-203ENST00000546079 SEC24BO95487 1268 aa21.22■□□□□ 0.99
CLPTM1-203ENST00000546079 A2MP01023 1474 aa21.22■□□□□ 0.99
CLPTM1-203ENST00000546079 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
CLPTM1-203ENST00000546079 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
CLPTM1-203ENST00000546079 NLRP1Q9C000 1473 aa21.21■□□□□ 0.99
CLPTM1-203ENST00000546079 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
CLPTM1-203ENST00000546079 PANK3Q9H999 370 aa21.21■□□□□ 0.99
CLPTM1-203ENST00000546079 TRMT2AQ8IZ69 625 aaKnown RBP21.21■□□□□ 0.99
CLPTM1-203ENST00000546079 GPRASP1Q5JY77 1395 aa21.19■□□□□ 0.98
CLPTM1-203ENST00000546079 IGHDP01880 384 aa21.19■□□□□ 0.98
CLPTM1-203ENST00000546079 VWDEQ8N2E2 1590 aa21.18■□□□□ 0.98
CLPTM1-203ENST00000546079 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLPTM1-203ENST00000546079 TESK2Q96S53 571 aa21.17■□□□□ 0.98
CLPTM1-203ENST00000546079 EIF2AK4Q9P2K8 1649 aaKnown RBP21.17■□□□□ 0.98
CLPTM1-203ENST00000546079 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
CLPTM1-203ENST00000546079 WDR43Q15061 677 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLPTM1-203ENST00000546079 MCM4P33991 863 aa21.16■□□□□ 0.98
CLPTM1-203ENST00000546079 PANK2Q9BZ23 570 aa21.16■□□□□ 0.98
CLPTM1-203ENST00000546079 MRE11P49959 708 aa21.16■□□□□ 0.98
CLPTM1-203ENST00000546079 TET3O43151 1660 aa21.16■□□□□ 0.98
CLPTM1-203ENST00000546079 DISP3Q9P2K9 1392 aa21.15■□□□□ 0.98
CLPTM1-203ENST00000546079 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
CLPTM1-203ENST00000546079 UPF2Q9HAU5 1272 aaKnown RBP21.15■□□□□ 0.98
CLPTM1-203ENST00000546079 CGNL1Q0VF96 1302 aa21.14■□□□□ 0.98
CLPTM1-203ENST00000546079 MROH1Q8NDA8 1641 aa21.14■□□□□ 0.98
CLPTM1-203ENST00000546079 TBC1D32Q96NH3 1257 aa21.14■□□□□ 0.97
CLPTM1-203ENST00000546079 TBC1D2Q9BYX2 928 aa21.14■□□□□ 0.97
CLPTM1-203ENST00000546079 ZMYM3Q14202 1370 aa21.14■□□□□ 0.97
CLPTM1-203ENST00000546079 SPHKAPQ2M3C7 1700 aa21.14■□□□□ 0.97
CLPTM1-203ENST00000546079 TRPM2O94759 1503 aa21.14■□□□□ 0.97
CLPTM1-203ENST00000546079 PRDM15P57071 1507 aaPredicted RBP21.13■□□□□ 0.97
CLPTM1-203ENST00000546079 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
CLPTM1-203ENST00000546079 CFAP74Q9C0B2 1584 aa21.13■□□□□ 0.97
CLPTM1-203ENST00000546079 PDE3AQ14432 1141 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 ZNF518AQ6AHZ1 1483 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 LAMC1P11047 1609 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 NBPF1Q3BBV0 1214 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 ISY1Q9ULR0 285 aaKnown RBP21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 PTPRTO14522 1441 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 CD109Q6YHK3 1445 aa21.12■□□□□ 0.97
CLPTM1-203ENST00000546079 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
CLPTM1-203ENST00000546079 ARXQ96QS3 562 aa21.1■□□□□ 0.97
CLPTM1-203ENST00000546079 CEP152O94986 1710 aa21.1■□□□□ 0.97
CLPTM1-203ENST00000546079 BCAR3O75815 825 aa21.1■□□□□ 0.97
CLPTM1-203ENST00000546079 TMF1P82094 1093 aa21.1■□□□□ 0.97
CLPTM1-203ENST00000546079 CLUAP1Q96AJ1 413 aa21.1■□□□□ 0.97
CLPTM1-203ENST00000546079 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
CLPTM1-203ENST00000546079 ESPNB1AK53 854 aa21.09■□□□□ 0.97
CLPTM1-203ENST00000546079 TRAK2O60296 914 aa21.09■□□□□ 0.97
CLPTM1-203ENST00000546079 MYH16Q9H6N6 1097 aa21.09■□□□□ 0.97
CLPTM1-203ENST00000546079 CLTCL1P53675 1640 aa21.08■□□□□ 0.97
CLPTM1-203ENST00000546079 KIF3BO15066 747 aa21.07■□□□□ 0.96
CLPTM1-203ENST00000546079 GZF1Q9H116 711 aaPredicted RBP21.07■□□□□ 0.96
CLPTM1-203ENST00000546079 POGZQ7Z3K3 1410 aa21.07■□□□□ 0.96
CLPTM1-203ENST00000546079 KANK1Q14678 1352 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms