RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
CIT-218ENST00000546026 ZFYVE9O95405 1425 aa14.25□□□□□ -0.13
CIT-218ENST00000546026 ADGRF5Q8IZF2 1346 aa14.25□□□□□ -0.13
CIT-218ENST00000546026 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
CIT-218ENST00000546026 TNRQ92752 1358 aa14.22□□□□□ -0.13
CIT-218ENST00000546026 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
CIT-218ENST00000546026 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
CIT-218ENST00000546026 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
CIT-218ENST00000546026 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
CIT-218ENST00000546026 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.13
CIT-218ENST00000546026 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
CIT-218ENST00000546026 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.13
CIT-218ENST00000546026 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
CIT-218ENST00000546026 A2ML1A8K2U0 1454 aa14.2□□□□□ -0.14
CIT-218ENST00000546026 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
CIT-218ENST00000546026 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
CIT-218ENST00000546026 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
CIT-218ENST00000546026 SCAF11Q99590 1463 aaKnown RBP14.19□□□□□ -0.14
CIT-218ENST00000546026 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
CIT-218ENST00000546026 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
CIT-218ENST00000546026 MYO5BQ9ULV0 1848 aa14.19□□□□□ -0.14
CIT-218ENST00000546026 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
CIT-218ENST00000546026 NLRP1Q9C000 1473 aa14.18□□□□□ -0.14
CIT-218ENST00000546026 C3P01024 1663 aa14.18□□□□□ -0.14
CIT-218ENST00000546026 KIF7Q2M1P5 1343 aa14.17□□□□□ -0.14
CIT-218ENST00000546026 HDGFP51858 240 aaKnown RBP14.17□□□□□ -0.14
CIT-218ENST00000546026 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
CIT-218ENST00000546026 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
CIT-218ENST00000546026 MIER1Q8N108 512 aa14.16□□□□□ -0.14
CIT-218ENST00000546026 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
CIT-218ENST00000546026 ADAMTSL3P82987 1691 aa14.15□□□□□ -0.14
CIT-218ENST00000546026 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
CIT-218ENST00000546026 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
CIT-218ENST00000546026 TESK2Q96S53 571 aa14.14□□□□□ -0.15
CIT-218ENST00000546026 ADGRB1O14514 1584 aa14.13□□□□□ -0.15
CIT-218ENST00000546026 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
CIT-218ENST00000546026 TMF1P82094 1093 aa14.12□□□□□ -0.15
CIT-218ENST00000546026 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
CIT-218ENST00000546026 RIMS1Q86UR5 1692 aaKnown RBP14.11□□□□□ -0.15
CIT-218ENST00000546026 TMEM2Q9UHN6 1383 aa14.1□□□□□ -0.15
CIT-218ENST00000546026 MYO3AQ8NEV4 1616 aa14.09□□□□□ -0.15
CIT-218ENST00000546026 ANP32CO43423 234 aa14.09□□□□□ -0.15
CIT-218ENST00000546026 CDCA8Q53HL2 280 aa14.09□□□□□ -0.15
CIT-218ENST00000546026 ALKQ9UM73 1620 aa14.08□□□□□ -0.15
CIT-218ENST00000546026 TMEM132EQ6IEE7 984 aa14.08□□□□□ -0.16
CIT-218ENST00000546026 THEMISQ8N1K5 641 aaPredicted RBP14.08□□□□□ -0.16
CIT-218ENST00000546026 SBNO2Q9Y2G9 1366 aa14.08□□□□□ -0.16
CIT-218ENST00000546026 SLIT1O75093 1534 aa14.06□□□□□ -0.16
CIT-218ENST00000546026 TRAK1Q9UPV9 953 aa14.06□□□□□ -0.16
CIT-218ENST00000546026 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
CIT-218ENST00000546026 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
CIT-218ENST00000546026 ARHGAP23Q9P227 1491 aa14.06□□□□□ -0.16
CIT-218ENST00000546026 POLR3GLQ9BT43 218 aa14.05□□□□□ -0.16
CIT-218ENST00000546026 EID1Q9Y6B2 187 aa14.05□□□□□ -0.16
CIT-218ENST00000546026 ASXL1Q8IXJ9 1541 aa14.05□□□□□ -0.16
CIT-218ENST00000546026 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
CIT-218ENST00000546026 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
CIT-218ENST00000546026 CCER2I3L3R5 266 aa14.03□□□□□ -0.16
CIT-218ENST00000546026 PLEKHG1Q9ULL1 1385 aa14.03□□□□□ -0.16
CIT-218ENST00000546026 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
CIT-218ENST00000546026 SETD1AO15047 1707 aaKnown RBP14.02□□□□□ -0.16
CIT-218ENST00000546026 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.16
CIT-218ENST00000546026 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.16
CIT-218ENST00000546026 TXNDC2Q86VQ3 553 aa14.02□□□□□ -0.17
CIT-218ENST00000546026 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
CIT-218ENST00000546026 ARHGEF28Q8N1W1 1705 aaKnown RBP14.01□□□□□ -0.17
CIT-218ENST00000546026 PTPRMP28827 1452 aa14.01□□□□□ -0.17
CIT-218ENST00000546026 LRPPRCP42704 1394 aaKnown RBP14.01□□□□□ -0.17
CIT-218ENST00000546026 LTKP29376 864 aa14.01□□□□□ -0.17
CIT-218ENST00000546026 DLC1Q96QB1 1528 aa14□□□□□ -0.17
CIT-218ENST00000546026 ABCC11Q96J66 1382 aa14□□□□□ -0.17
CIT-218ENST00000546026 SIRT1Q96EB6 747 aa14□□□□□ -0.17
CIT-218ENST00000546026 ZNF142P52746 1687 aaPredicted RBP14□□□□□ -0.17
CIT-218ENST00000546026 QRICH2Q9H0J4 1663 aa14□□□□□ -0.17
CIT-218ENST00000546026 STK26Q9P289 416 aa13.99□□□□□ -0.17
CIT-218ENST00000546026 BCANQ96GW7 911 aa13.98□□□□□ -0.17
CIT-218ENST00000546026 MED14O60244 1454 aa13.98□□□□□ -0.17
CIT-218ENST00000546026 ADAMTS13Q76LX8 1427 aa13.98□□□□□ -0.17
CIT-218ENST00000546026 PRKRIP1Q9H875 184 aaPredicted RBP13.97□□□□□ -0.17
CIT-218ENST00000546026 TBX22Q9Y458 520 aa13.97□□□□□ -0.17
CIT-218ENST00000546026 METP08581 1390 aa13.96□□□□□ -0.17
CIT-218ENST00000546026 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
CIT-218ENST00000546026 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.17
CIT-218ENST00000546026 POGKQ9P215 609 aa13.96□□□□□ -0.17
CIT-218ENST00000546026 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.18
CIT-218ENST00000546026 PER1O15534 1290 aaPredicted RBP13.95□□□□□ -0.18
CIT-218ENST00000546026 ANKLE2Q86XL3 938 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 PRAM1Q96QH2 718 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 PANK3Q9H999 370 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 TECPR2O15040 1411 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 DIP2AQ14689 1571 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
CIT-218ENST00000546026 FAM135BQ49AJ0 1406 aa13.94□□□□□ -0.18
CIT-218ENST00000546026 MYOM1P52179 1685 aa13.91□□□□□ -0.18
CIT-218ENST00000546026 CPS1P31327 1500 aa13.91□□□□□ -0.18
CIT-218ENST00000546026 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
CIT-218ENST00000546026 RALBP1Q15311 655 aa13.91□□□□□ -0.18
CIT-218ENST00000546026 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
CIT-218ENST00000546026 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
CIT-218ENST00000546026 NINLQ9Y2I6 1382 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms