RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 SLC26A8Q96RN1 970 aa11.86□□□□□ -0.51
LDHA-224ENST00000545467 QTRT2Q9H974 415 aaKnown RBP11.86□□□□□ -0.51
LDHA-224ENST00000545467 ATAD2Q6PL18 1390 aa11.86□□□□□ -0.51
LDHA-224ENST00000545467 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
LDHA-224ENST00000545467 SHPRHQ149N8 1683 aa11.85□□□□□ -0.51
LDHA-224ENST00000545467 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
LDHA-224ENST00000545467 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
LDHA-224ENST00000545467 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
LDHA-224ENST00000545467 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
LDHA-224ENST00000545467 NGLY1Q96IV0 654 aa11.83□□□□□ -0.52
LDHA-224ENST00000545467 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
LDHA-224ENST00000545467 CAMSAP2Q08AD1 1489 aa11.83□□□□□ -0.52
LDHA-224ENST00000545467 AHDC1Q5TGY3 1603 aaPredicted RBP11.82□□□□□ -0.52
LDHA-224ENST00000545467 TET3O43151 1660 aa11.82□□□□□ -0.52
LDHA-224ENST00000545467 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
LDHA-224ENST00000545467 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
LDHA-224ENST00000545467 NWD1Q149M9 1564 aa11.82□□□□□ -0.52
LDHA-224ENST00000545467 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
LDHA-224ENST00000545467 TSPY4P0CV99 314 aa11.81□□□□□ -0.52
LDHA-224ENST00000545467 TSPY10P0CW01 314 aa11.81□□□□□ -0.52
LDHA-224ENST00000545467 ARHGAP31Q2M1Z3 1444 aa11.79□□□□□ -0.52
LDHA-224ENST00000545467 KDM5AP29375 1690 aaKnown RBP11.79□□□□□ -0.52
LDHA-224ENST00000545467 C8orf37Q96NL8 207 aa11.79□□□□□ -0.52
LDHA-224ENST00000545467 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
LDHA-224ENST00000545467 C19orf44Q9H6X5 657 aa11.78□□□□□ -0.52
LDHA-224ENST00000545467 DIP2AQ14689 1571 aa11.77□□□□□ -0.53
LDHA-224ENST00000545467 ATF3P18847 181 aa11.77□□□□□ -0.53
LDHA-224ENST00000545467 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
LDHA-224ENST00000545467 C14orf37Q86TY3 774 aa11.77□□□□□ -0.53
LDHA-224ENST00000545467 BCANQ96GW7 911 aa11.77□□□□□ -0.53
LDHA-224ENST00000545467 EFCAB6Q5THR3 1501 aa11.76□□□□□ -0.53
LDHA-224ENST00000545467 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
LDHA-224ENST00000545467 IDI1Q13907 227 aa11.76□□□□□ -0.53
LDHA-224ENST00000545467 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
LDHA-224ENST00000545467 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
LDHA-224ENST00000545467 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
LDHA-224ENST00000545467 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
LDHA-224ENST00000545467 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
LDHA-224ENST00000545467 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
LDHA-224ENST00000545467 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
LDHA-224ENST00000545467 EP400Q96L91 3159 aa11.73□□□□□ -0.53
LDHA-224ENST00000545467 CEP152O94986 1710 aa11.73□□□□□ -0.53
LDHA-224ENST00000545467 EIF2AK4Q9P2K8 1649 aaKnown RBP11.73□□□□□ -0.53
LDHA-224ENST00000545467 CHD2O14647 1828 aaKnown RBP11.72□□□□□ -0.53
LDHA-224ENST00000545467 LRP5O75197 1615 aa11.72□□□□□ -0.53
LDHA-224ENST00000545467 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
LDHA-224ENST00000545467 TBX22Q9Y458 520 aa11.72□□□□□ -0.53
LDHA-224ENST00000545467 KANK4Q5T7N3 995 aaPredicted RBP11.71□□□□□ -0.53
LDHA-224ENST00000545467 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
LDHA-224ENST00000545467 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
LDHA-224ENST00000545467 USP21Q9UK80 565 aa11.7□□□□□ -0.54
LDHA-224ENST00000545467 PNPLA6Q8IY17 1366 aa11.69□□□□□ -0.54
LDHA-224ENST00000545467 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
LDHA-224ENST00000545467 MAST1Q9Y2H9 1570 aa11.69□□□□□ -0.54
LDHA-224ENST00000545467 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
LDHA-224ENST00000545467 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
LDHA-224ENST00000545467 SLC52A1Q9NWF4 448 aa11.68□□□□□ -0.54
LDHA-224ENST00000545467 ASXL1Q8IXJ9 1541 aa11.67□□□□□ -0.54
LDHA-224ENST00000545467 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
LDHA-224ENST00000545467 BLMP54132 1417 aaPredicted RBP11.67□□□□□ -0.54
LDHA-224ENST00000545467 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
LDHA-224ENST00000545467 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
LDHA-224ENST00000545467 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
LDHA-224ENST00000545467 ATRNO75882 1429 aa11.66□□□□□ -0.54
LDHA-224ENST00000545467 DCCP43146 1447 aa11.66□□□□□ -0.54
LDHA-224ENST00000545467 PIK3R4Q99570 1358 aa11.66□□□□□ -0.54
LDHA-224ENST00000545467 ADGRB3O60242 1522 aa11.65□□□□□ -0.55
LDHA-224ENST00000545467 DUOX2Q9NRD8 1548 aa11.65□□□□□ -0.55
LDHA-224ENST00000545467 ZFYVE9O95405 1425 aa11.64□□□□□ -0.55
LDHA-224ENST00000545467 YY1P25490 414 aa11.64□□□□□ -0.55
LDHA-224ENST00000545467 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
LDHA-224ENST00000545467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
LDHA-224ENST00000545467 KANK1Q14678 1352 aa11.64□□□□□ -0.55
LDHA-224ENST00000545467 NOS1P29475 1434 aa11.63□□□□□ -0.55
LDHA-224ENST00000545467 SF3B2Q13435 895 aaKnown RBP11.63□□□□□ -0.55
LDHA-224ENST00000545467 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
LDHA-224ENST00000545467 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
LDHA-224ENST00000545467 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.62□□□□□ -0.55
LDHA-224ENST00000545467 GCC2Q8IWJ2 1684 aa11.62□□□□□ -0.55
LDHA-224ENST00000545467 MST1RQ04912 1400 aa11.61□□□□□ -0.55
LDHA-224ENST00000545467 PTCH1Q13635 1447 aa11.61□□□□□ -0.55
LDHA-224ENST00000545467 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
LDHA-224ENST00000545467 DDX17Q92841 729 aaKnown RBP11.61□□□□□ -0.55
LDHA-224ENST00000545467 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
LDHA-224ENST00000545467 AMOTL2Q9Y2J4 779 aa11.61□□□□□ -0.55
LDHA-224ENST00000545467 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
LDHA-224ENST00000545467 ERBINQ96RT1 1412 aa11.6□□□□□ -0.55
LDHA-224ENST00000545467 PTPN23Q9H3S7 1636 aa11.6□□□□□ -0.55
LDHA-224ENST00000545467 LMTK2Q8IWU2 1503 aa11.6□□□□□ -0.55
LDHA-224ENST00000545467 KIF15Q9NS87 1388 aa11.59□□□□□ -0.55
LDHA-224ENST00000545467 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
LDHA-224ENST00000545467 PSDA5PKW4 1024 aaPredicted RBP11.58□□□□□ -0.56
LDHA-224ENST00000545467 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
LDHA-224ENST00000545467 BCL9LQ86UU0 1499 aa11.57□□□□□ -0.56
LDHA-224ENST00000545467 RAB3GAP2Q9H2M9 1393 aa11.57□□□□□ -0.56
LDHA-224ENST00000545467 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
LDHA-224ENST00000545467 SOS2Q07890 1332 aaPredicted RBP11.56□□□□□ -0.56
LDHA-224ENST00000545467 PTPRUQ92729 1446 aa11.55□□□□□ -0.56
LDHA-224ENST00000545467 DIEXFQ68CQ4 756 aaKnown RBP11.54□□□□□ -0.56
LDHA-224ENST00000545467 TRPM2O94759 1503 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms