RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 POLR3GLQ9BT43 218 aa31.37■■■□□ 2.61
FOXA1-202ENST00000545425 FANCIQ9NVI1 1328 aa31.37■■■□□ 2.61
FOXA1-202ENST00000545425 RNF17Q9BXT8 1623 aaKnown RBP31.33■■■□□ 2.61
FOXA1-202ENST00000545425 PARD3Q8TEW0 1356 aa31.33■■■□□ 2.61
FOXA1-202ENST00000545425 CEBPAP49715 358 aaPredicted RBP31.29■■■□□ 2.6
FOXA1-202ENST00000545425 IRX6P78412 446 aaPredicted RBP31.29■■■□□ 2.6
FOXA1-202ENST00000545425 NLRP13Q86W25 1043 aa31.29■■■□□ 2.6
FOXA1-202ENST00000545425 PPP6R1Q9UPN7 881 aa31.29■■■□□ 2.6
FOXA1-202ENST00000545425 NEURL4Q96JN8 1562 aa31.26■■■□□ 2.6
FOXA1-202ENST00000545425 GGT6Q6P531 493 aa31.26■■■□□ 2.6
FOXA1-202ENST00000545425 PDE3BQ13370 1112 aa31.24■■■□□ 2.59
FOXA1-202ENST00000545425 LMTK3Q96Q04 1460 aa31.24■■■□□ 2.59
FOXA1-202ENST00000545425 DEPDC5O75140 1603 aa31.24■■■□□ 2.59
FOXA1-202ENST00000545425 TRPM2O94759 1503 aa31.24■■■□□ 2.59
FOXA1-202ENST00000545425 KIF3BO15066 747 aa31.2■■■□□ 2.59
FOXA1-202ENST00000545425 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.2■■■□□ 2.593e-7■□□□□ 8.7
FOXA1-202ENST00000545425 TMF1P82094 1093 aa31.19■■■□□ 2.58
FOXA1-202ENST00000545425 PTPRTO14522 1441 aa31.19■■■□□ 2.58
FOXA1-202ENST00000545425 TESK2Q96S53 571 aa31.18■■■□□ 2.58
FOXA1-202ENST00000545425 CEP152O94986 1710 aa31.17■■■□□ 2.58
FOXA1-202ENST00000545425 ZMYM3Q14202 1370 aa31.17■■■□□ 2.58
FOXA1-202ENST00000545425 PER1O15534 1290 aaPredicted RBP31.17■■■□□ 2.58
FOXA1-202ENST00000545425 TET3O43151 1660 aa31.16■■■□□ 2.58
FOXA1-202ENST00000545425 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
FOXA1-202ENST00000545425 RGL3Q3MIN7 710 aa31.14■■■□□ 2.58
FOXA1-202ENST00000545425 IQGAP1P46940 1657 aa31.14■■■□□ 2.57
FOXA1-202ENST00000545425 NBPF1Q3BBV0 1214 aa31.13■■■□□ 2.57
FOXA1-202ENST00000545425 VWDEQ8N2E2 1590 aa31.12■■■□□ 2.57
FOXA1-202ENST00000545425 KIAA1210Q9ULL0 1709 aa31.12■■■□□ 2.57
FOXA1-202ENST00000545425 C3P01024 1663 aa31.12■■■□□ 2.57
FOXA1-202ENST00000545425 MROH2AA6NES4 1674 aa31.1■■■□□ 2.57
FOXA1-202ENST00000545425 SLC24A1O60721 1099 aa31.1■■■□□ 2.57
FOXA1-202ENST00000545425 CDCA8Q53HL2 280 aa31.1■■■□□ 2.57
FOXA1-202ENST00000545425 HSPA2P54652 639 aa31.1■■■□□ 2.57
FOXA1-202ENST00000545425 KANK1Q14678 1352 aa31.1■■■□□ 2.57
FOXA1-202ENST00000545425 NPATQ14207 1427 aa31.09■■■□□ 2.57
FOXA1-202ENST00000545425 B4GALNT3Q6L9W6 998 aa31.08■■■□□ 2.57
FOXA1-202ENST00000545425 DISP3Q9P2K9 1392 aa31.08■■■□□ 2.57
FOXA1-202ENST00000545425 SETD1BQ9UPS6 1966 aaKnown RBP31.07■■■□□ 2.57
FOXA1-202ENST00000545425 PREX1Q8TCU6 1659 aa31.06■■■□□ 2.56
FOXA1-202ENST00000545425 BLMP54132 1417 aaPredicted RBP31.06■■■□□ 2.56
FOXA1-202ENST00000545425 CLTCQ00610 1675 aaKnown RBP31.04■■■□□ 2.56
FOXA1-202ENST00000545425 SCAF11Q99590 1463 aaKnown RBP31.03■■■□□ 2.56
FOXA1-202ENST00000545425 SYNMO15061 1565 aa31.03■■■□□ 2.56
FOXA1-202ENST00000545425 EIF3AQ14152 1382 aaKnown RBP31■■■□□ 2.55
FOXA1-202ENST00000545425 CLTCL1P53675 1640 aa31■■■□□ 2.55
FOXA1-202ENST00000545425 CCDC136Q96JN2 1154 aa31■■■□□ 2.55
FOXA1-202ENST00000545425 CNGB1Q14028 1251 aaPredicted RBP30.98■■■□□ 2.55
FOXA1-202ENST00000545425 PANK3Q9H999 370 aa30.97■■■□□ 2.55
FOXA1-202ENST00000545425 NPC1L1Q9UHC9 1359 aa30.97■■■□□ 2.55
FOXA1-202ENST00000545425 MYOM2P54296 1465 aa30.96■■■□□ 2.55
FOXA1-202ENST00000545425 RRP1P56182 461 aaKnown RBP30.94■■■□□ 2.54
FOXA1-202ENST00000545425 RCAN3Q9UKA8 241 aa30.91■■■□□ 2.54
FOXA1-202ENST00000545425 LMTK2Q8IWU2 1503 aa30.9■■■□□ 2.54
FOXA1-202ENST00000545425 DMRT2Q9Y5R5 561 aa30.88■■■□□ 2.53
FOXA1-202ENST00000545425 MSH5O43196 834 aa30.87■■■□□ 2.53
FOXA1-202ENST00000545425 ERICH6Q7L0X2 663 aa30.87■■■□□ 2.53
FOXA1-202ENST00000545425 MROH1Q8NDA8 1641 aa30.86■■■□□ 2.53
FOXA1-202ENST00000545425 FBXO31Q5XUX0 539 aaPredicted RBP30.86■■■□□ 2.53
FOXA1-202ENST00000545425 PIK3C2GO75747 1445 aa30.85■■■□□ 2.53
FOXA1-202ENST00000545425 ABCC3O15438 1527 aa30.85■■■□□ 2.53
FOXA1-202ENST00000545425 EFCAB6Q5THR3 1501 aa30.85■■■□□ 2.53
FOXA1-202ENST00000545425 ASXL1Q8IXJ9 1541 aa30.85■■■□□ 2.53
FOXA1-202ENST00000545425 KNSTRNQ9Y448 316 aa30.84■■■□□ 2.53
FOXA1-202ENST00000545425 KDM5AP29375 1690 aaKnown RBP30.83■■■□□ 2.53
FOXA1-202ENST00000545425 TNRQ92752 1358 aa30.83■■■□□ 2.53
FOXA1-202ENST00000545425 KIF1BO60333 1816 aa30.83■■■□□ 2.53
FOXA1-202ENST00000545425 ZC3H13Q5T200 1668 aaKnown RBP30.82■■■□□ 2.52
FOXA1-202ENST00000545425 CC2D1BQ5T0F9 858 aaKnown RBP30.82■■■□□ 2.52
FOXA1-202ENST00000545425 IFT172Q9UG01 1749 aa30.8■■■□□ 2.52
FOXA1-202ENST00000545425 MYO3AQ8NEV4 1616 aa30.78■■■□□ 2.52
FOXA1-202ENST00000545425 MYOM1P52179 1685 aa30.77■■■□□ 2.52
FOXA1-202ENST00000545425 SBNO2Q9Y2G9 1366 aa30.77■■■□□ 2.52
FOXA1-202ENST00000545425 NRXN1Q9ULB1 1477 aa30.77■■■□□ 2.52
FOXA1-202ENST00000545425 CEP170BQ9Y4F5 1589 aaPredicted RBP30.76■■■□□ 2.51
FOXA1-202ENST00000545425 A2ML1A8K2U0 1454 aa30.76■■■□□ 2.51
FOXA1-202ENST00000545425 AMER1Q5JTC6 1135 aaPredicted RBP30.75■■■□□ 2.51
FOXA1-202ENST00000545425 SETBP1Q9Y6X0 1596 aa30.74■■■□□ 2.51
FOXA1-202ENST00000545425 ZNF142P52746 1687 aaPredicted RBP30.73■■■□□ 2.51
FOXA1-202ENST00000545425 PPP2R1AP30153 589 aa30.73■■■□□ 2.51
FOXA1-202ENST00000545425 CAMSAP1Q5T5Y3 1602 aa30.72■■■□□ 2.51
FOXA1-202ENST00000545425 ARHGAP31Q2M1Z3 1444 aa30.72■■■□□ 2.51
FOXA1-202ENST00000545425 TCERG1O14776 1098 aaKnown RBP30.72■■■□□ 2.51
FOXA1-202ENST00000545425 NGEFQ8N5V2 710 aa30.72■■■□□ 2.51
FOXA1-202ENST00000545425 NLRP1Q9C000 1473 aa30.71■■■□□ 2.51
FOXA1-202ENST00000545425 STRCQ7RTU9 1775 aa30.71■■■□□ 2.51
FOXA1-202ENST00000545425 WDR43Q15061 677 aaKnown RBP eCLIP30.69■■■□□ 2.5
FOXA1-202ENST00000545425 ERVK-7P63135 1459 aa30.68■■■□□ 2.5
FOXA1-202ENST00000545425 MS4A1P11836 297 aa30.68■■■□□ 2.5
FOXA1-202ENST00000545425 ADGRB3O60242 1522 aa30.67■■■□□ 2.5
FOXA1-202ENST00000545425 SPATA31D1Q6ZQQ2 1576 aa30.67■■■□□ 2.5
FOXA1-202ENST00000545425 THEMISQ8N1K5 641 aaPredicted RBP30.66■■■□□ 2.5
FOXA1-202ENST00000545425 ANP32AP39687 249 aaKnown RBP30.65■■■□□ 2.5
FOXA1-202ENST00000545425 NCKAP5LQ9HCH0 1330 aa30.64■■■□□ 2.5
FOXA1-202ENST00000545425 EXOC6Q8TAG9 804 aa30.63■■■□□ 2.49
FOXA1-202ENST00000545425 ADAMTS8Q9UP79 889 aa30.61■■■□□ 2.49
FOXA1-202ENST00000545425 ZNF521Q96K83 1311 aa30.59■■■□□ 2.49
FOXA1-202ENST00000545425 RPGRIP1LQ68CZ1 1315 aa30.59■■■□□ 2.49
FOXA1-202ENST00000545425 CDCA7LQ96GN5 454 aa30.59■■■□□ 2.49
FOXA1-202ENST00000545425 NOP58Q9Y2X3 529 aaKnown RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms