RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
SPPL3-209ENST00000545209 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
SPPL3-209ENST00000545209 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
SPPL3-209ENST00000545209 MICALL2Q8IY33 904 aa10.15□□□□□ -0.78
SPPL3-209ENST00000545209 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
SPPL3-209ENST00000545209 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
SPPL3-209ENST00000545209 NCOA1Q15788 1441 aa10.15□□□□□ -0.79
SPPL3-209ENST00000545209 CCDC141Q6ZP82 1450 aa10.14□□□□□ -0.79
SPPL3-209ENST00000545209 WDR7Q9Y4E6 1490 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 PPP1R37O75864 691 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 NEUROD1Q13562 356 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 SLAIN1Q8ND83 568 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 SAMD9LQ8IVG5 1584 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
SPPL3-209ENST00000545209 KDM6BO15054 1643 aa10.12□□□□□ -0.79
SPPL3-209ENST00000545209 GTPBP6O43824 516 aaPredicted RBP10.12□□□□□ -0.79
SPPL3-209ENST00000545209 PLCH2O75038 1416 aa10.12□□□□□ -0.79
SPPL3-209ENST00000545209 KIAA1107Q9UPP5 1409 aa10.12□□□□□ -0.79
SPPL3-209ENST00000545209 TONSLQ96HA7 1378 aa10.12□□□□□ -0.79
SPPL3-209ENST00000545209 MBD5Q9P267 1494 aa10.11□□□□□ -0.79
SPPL3-209ENST00000545209 EFCAB2Q5VUJ9 269 aa10.11□□□□□ -0.79
SPPL3-209ENST00000545209 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
SPPL3-209ENST00000545209 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
SPPL3-209ENST00000545209 ARAP3Q8WWN8 1544 aa10.11□□□□□ -0.79
SPPL3-209ENST00000545209 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
SPPL3-209ENST00000545209 HNRNPMP52272 730 aaKnown RBP eCLIP10.1□□□□□ -0.79
SPPL3-209ENST00000545209 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
SPPL3-209ENST00000545209 SYCP2Q9BX26 1530 aa10.1□□□□□ -0.79
SPPL3-209ENST00000545209 KIF15Q9NS87 1388 aa10.1□□□□□ -0.79
SPPL3-209ENST00000545209 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
SPPL3-209ENST00000545209 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.08□□□□□ -0.8
SPPL3-209ENST00000545209 ASXL2Q76L83 1435 aa10.07□□□□□ -0.8
SPPL3-209ENST00000545209 ABCA9Q8IUA7 1624 aa10.06□□□□□ -0.8
SPPL3-209ENST00000545209 ABCC1P33527 1531 aa10.06□□□□□ -0.8
SPPL3-209ENST00000545209 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
SPPL3-209ENST00000545209 DENND4BO75064 1496 aaPredicted RBP10.04□□□□□ -0.8
SPPL3-209ENST00000545209 PZPP20742 1482 aa10.04□□□□□ -0.8
SPPL3-209ENST00000545209 PPP1R15AO75807 674 aaPredicted RBP10.04□□□□□ -0.8
SPPL3-209ENST00000545209 NUP155O75694 1391 aa10.03□□□□□ -0.8
SPPL3-209ENST00000545209 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
SPPL3-209ENST00000545209 KDM5DQ9BY66 1539 aa10.03□□□□□ -0.8
SPPL3-209ENST00000545209 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
SPPL3-209ENST00000545209 FANCAO15360 1455 aa10.03□□□□□ -0.8
SPPL3-209ENST00000545209 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
SPPL3-209ENST00000545209 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
SPPL3-209ENST00000545209 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
SPPL3-209ENST00000545209 RPRD2Q5VT52 1461 aaKnown RBP10.01□□□□□ -0.81
SPPL3-209ENST00000545209 SPAG9O60271 1321 aaKnown RBP10.01□□□□□ -0.81
SPPL3-209ENST00000545209 CFAP74Q9C0B2 1584 aa10.01□□□□□ -0.81
SPPL3-209ENST00000545209 RTEL1-TNFRSF6BF6WH68 1400 aa10□□□□□ -0.81
SPPL3-209ENST00000545209 ERBINQ96RT1 1412 aa10□□□□□ -0.81
SPPL3-209ENST00000545209 TRAPPC8Q9Y2L5 1435 aa9.99□□□□□ -0.81
SPPL3-209ENST00000545209 ADGRL1O94910 1474 aa9.99□□□□□ -0.81
SPPL3-209ENST00000545209 UNC13BO14795 1591 aa9.98□□□□□ -0.81
SPPL3-209ENST00000545209 SNPHO15079 494 aa9.98□□□□□ -0.81
SPPL3-209ENST00000545209 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
SPPL3-209ENST00000545209 CD109Q6YHK3 1445 aa9.98□□□□□ -0.81
SPPL3-209ENST00000545209 ZFYVE16Q7Z3T8 1539 aa9.97□□□□□ -0.81
SPPL3-209ENST00000545209 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
SPPL3-209ENST00000545209 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
SPPL3-209ENST00000545209 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
SPPL3-209ENST00000545209 FAM163AQ96GL9 167 aaPredicted RBP9.96□□□□□ -0.82
SPPL3-209ENST00000545209 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
SPPL3-209ENST00000545209 TEX14Q8IWB6 1497 aa9.96□□□□□ -0.82
SPPL3-209ENST00000545209 ATP7AQ04656 1500 aa9.96□□□□□ -0.82
SPPL3-209ENST00000545209 C2orf72A6NCS6 295 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 KIF3CO14782 793 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 AFAP1Q8N556 730 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 L3MBTL2Q969R5 705 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 ZNF518AQ6AHZ1 1483 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
SPPL3-209ENST00000545209 RIMBP3CA6NJZ7 1639 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 RIMBP3BA6NNM3 1639 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 RIMBP3Q9UFD9 1639 aa9.95□□□□□ -0.82
SPPL3-209ENST00000545209 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
SPPL3-209ENST00000545209 MAGI2Q86UL8 1455 aa9.94□□□□□ -0.82
SPPL3-209ENST00000545209 CYB5RLQ6IPT4 315 aa9.94□□□□□ -0.82
SPPL3-209ENST00000545209 NEO1Q92859 1461 aa9.93□□□□□ -0.82
SPPL3-209ENST00000545209 KANK1Q14678 1352 aa9.92□□□□□ -0.82
SPPL3-209ENST00000545209 POGZQ7Z3K3 1410 aa9.91□□□□□ -0.82
SPPL3-209ENST00000545209 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
SPPL3-209ENST00000545209 CCDC144AA2RUR9 1427 aa9.9□□□□□ -0.82
SPPL3-209ENST00000545209 EIF2AK4Q9P2K8 1649 aaKnown RBP9.9□□□□□ -0.82
SPPL3-209ENST00000545209 GLI2P10070 1586 aa9.9□□□□□ -0.82
SPPL3-209ENST00000545209 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
SPPL3-209ENST00000545209 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
SPPL3-209ENST00000545209 EIF4G2P78344 907 aaKnown RBP eCLIP9.89□□□□□ -0.83
SPPL3-209ENST00000545209 CRISPLD2Q9H0B8 497 aa9.89□□□□□ -0.83
SPPL3-209ENST00000545209 KDM5CP41229 1560 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 MLH3Q9UHC1 1453 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 ST18O60284 1047 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 PDE4AP27815 886 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 DOK7Q18PE1 504 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
SPPL3-209ENST00000545209 CADPS2Q86UW7 1296 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 DEPDC5O75140 1603 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 HECW2Q9P2P5 1572 aa9.88□□□□□ -0.83
SPPL3-209ENST00000545209 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms