RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
CCDC7-210ENST00000545067 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
CCDC7-210ENST00000545067 MS4A1P11836 297 aa11.11□□□□□ -0.63
CCDC7-210ENST00000545067 MFAP1P55081 439 aaKnown RBP11.11□□□□□ -0.63
CCDC7-210ENST00000545067 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
CCDC7-210ENST00000545067 PER1O15534 1290 aaPredicted RBP11.1□□□□□ -0.63
CCDC7-210ENST00000545067 C14orf37Q86TY3 774 aa11.09□□□□□ -0.63
CCDC7-210ENST00000545067 KIF14Q15058 1648 aa11.09□□□□□ -0.63
CCDC7-210ENST00000545067 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
CCDC7-210ENST00000545067 RAPGEF3O95398 923 aa11.08□□□□□ -0.64
CCDC7-210ENST00000545067 TSR2Q969E8 191 aaKnown RBP11.08□□□□□ -0.64
CCDC7-210ENST00000545067 MYH16Q9H6N6 1097 aa11.08□□□□□ -0.64
CCDC7-210ENST00000545067 TARBP1Q13395 1621 aaKnown RBP11.08□□□□□ -0.64
CCDC7-210ENST00000545067 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-210ENST00000545067 CGNL1Q0VF96 1302 aa11.07□□□□□ -0.64
CCDC7-210ENST00000545067 DNMT1P26358 1616 aaKnown RBP11.07□□□□□ -0.64
CCDC7-210ENST00000545067 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
CCDC7-210ENST00000545067 DUSP27Q5VZP5 1158 aa11.07□□□□□ -0.64
CCDC7-210ENST00000545067 FOXD4L1Q9NU39 408 aa11.07□□□□□ -0.64
CCDC7-210ENST00000545067 RALGAPBQ86X10 1494 aa11.07□□□□□ -0.64
CCDC7-210ENST00000545067 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
CCDC7-210ENST00000545067 CYB5RLQ6IPT4 315 aa11.06□□□□□ -0.64
CCDC7-210ENST00000545067 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
CCDC7-210ENST00000545067 IL27Q8NEV9 243 aa11.06□□□□□ -0.64
CCDC7-210ENST00000545067 SLFN5Q08AF3 891 aa11.06□□□□□ -0.64
CCDC7-210ENST00000545067 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
CCDC7-210ENST00000545067 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
CCDC7-210ENST00000545067 SPINK5Q9NQ38 1064 aaPredicted RBP11.05□□□□□ -0.64
CCDC7-210ENST00000545067 HMOX1P09601 288 aa11.05□□□□□ -0.64
CCDC7-210ENST00000545067 EVC2Q86UK5 1308 aa11.04□□□□□ -0.64
CCDC7-210ENST00000545067 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
CCDC7-210ENST00000545067 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
CCDC7-210ENST00000545067 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
CCDC7-210ENST00000545067 SYCP2Q9BX26 1530 aa11.04□□□□□ -0.64
CCDC7-210ENST00000545067 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
CCDC7-210ENST00000545067 FRAT2O75474 233 aaPredicted RBP11.04□□□□□ -0.64
CCDC7-210ENST00000545067 KDM5BQ9UGL1 1544 aa11.04□□□□□ -0.64
CCDC7-210ENST00000545067 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
CCDC7-210ENST00000545067 RIPK4P57078 832 aa11.03□□□□□ -0.64
CCDC7-210ENST00000545067 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
CCDC7-210ENST00000545067 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
CCDC7-210ENST00000545067 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
CCDC7-210ENST00000545067 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
CCDC7-210ENST00000545067 NCLP19338 710 aaKnown RBP11.02□□□□□ -0.64
CCDC7-210ENST00000545067 ZKSCAN2Q63HK3 967 aa11.02□□□□□ -0.64
CCDC7-210ENST00000545067 GCC2Q8IWJ2 1684 aa11.02□□□□□ -0.65
CCDC7-210ENST00000545067 PLEKHH1Q9ULM0 1364 aa11.02□□□□□ -0.65
CCDC7-210ENST00000545067 GSE1Q14687 1217 aa11.02□□□□□ -0.65
CCDC7-210ENST00000545067 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
CCDC7-210ENST00000545067 FBLN1P23142 703 aa11.01□□□□□ -0.65
CCDC7-210ENST00000545067 EXOSC9Q06265 439 aaKnown RBP11.01□□□□□ -0.65
CCDC7-210ENST00000545067 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
CCDC7-210ENST00000545067 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
CCDC7-210ENST00000545067 TRAPPC8Q9Y2L5 1435 aa11.01□□□□□ -0.65
CCDC7-210ENST00000545067 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
CCDC7-210ENST00000545067 BRPF3Q9ULD4 1205 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 IGHDP01880 384 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 LNPKQ9C0E8 428 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 HSCBQ8IWL3 235 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 PDZRN3Q9UPQ7 1066 aa11□□□□□ -0.65
CCDC7-210ENST00000545067 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
CCDC7-210ENST00000545067 IPO8O15397 1037 aaKnown RBP10.99□□□□□ -0.65
CCDC7-210ENST00000545067 PRAM1Q96QH2 718 aa10.99□□□□□ -0.65
CCDC7-210ENST00000545067 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
CCDC7-210ENST00000545067 NSD3Q9BZ95 1437 aa10.99□□□□□ -0.65
CCDC7-210ENST00000545067 A2MP01023 1474 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 DIAPH1O60610 1272 aaKnown RBP10.98□□□□□ -0.65
CCDC7-210ENST00000545067 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
CCDC7-210ENST00000545067 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
CCDC7-210ENST00000545067 ITSN2Q9NZM3 1697 aa10.97□□□□□ -0.65
CCDC7-210ENST00000545067 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
CCDC7-210ENST00000545067 UHRF1BP1Q6BDS2 1440 aa10.97□□□□□ -0.65
CCDC7-210ENST00000545067 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
CCDC7-210ENST00000545067 CABP1Q9NZU7 370 aa10.96□□□□□ -0.65
CCDC7-210ENST00000545067 SLC4A10Q6U841 1118 aa10.96□□□□□ -0.65
CCDC7-210ENST00000545067 ADGRL2O95490 1459 aa10.96□□□□□ -0.66
CCDC7-210ENST00000545067 PNNQ9H307 717 aaKnown RBP10.96□□□□□ -0.66
CCDC7-210ENST00000545067 NUP160Q12769 1436 aa10.95□□□□□ -0.66
CCDC7-210ENST00000545067 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
CCDC7-210ENST00000545067 PRKAR2BP31323 418 aa10.94□□□□□ -0.66
CCDC7-210ENST00000545067 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
CCDC7-210ENST00000545067 NOB1Q9ULX3 412 aaKnown RBP10.94□□□□□ -0.66
CCDC7-210ENST00000545067 LTV1Q96GA3 475 aaPredicted RBP10.94□□□□□ -0.66
CCDC7-210ENST00000545067 BCORL1Q5H9F3 1711 aa10.94□□□□□ -0.66
CCDC7-210ENST00000545067 ANP32BQ92688 251 aaKnown RBP10.93□□□□□ -0.66
CCDC7-210ENST00000545067 NOS1P29475 1434 aa10.93□□□□□ -0.66
CCDC7-210ENST00000545067 MBD5Q9P267 1494 aa10.93□□□□□ -0.66
CCDC7-210ENST00000545067 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
CCDC7-210ENST00000545067 SCAF11Q99590 1463 aaKnown RBP10.93□□□□□ -0.66
CCDC7-210ENST00000545067 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
CCDC7-210ENST00000545067 WAPLQ7Z5K2 1190 aa10.93□□□□□ -0.66
CCDC7-210ENST00000545067 IDI1Q13907 227 aa10.93□□□□□ -0.66
CCDC7-210ENST00000545067 RLBP1P12271 317 aa10.92□□□□□ -0.66
CCDC7-210ENST00000545067 DDX19BQ9UMR2 479 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms