RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 PPP6R1Q9UPN7 881 aa25.19■■□□□ 1.62
LYSMD4-210ENST00000545021 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-210ENST00000545021 RNF17Q9BXT8 1623 aaKnown RBP25.16■■□□□ 1.62
LYSMD4-210ENST00000545021 C3P01024 1663 aa25.15■■□□□ 1.62
LYSMD4-210ENST00000545021 PREX1Q8TCU6 1659 aa25.15■■□□□ 1.62
LYSMD4-210ENST00000545021 L1TD1Q5T7N2 865 aaKnown RBP25.14■■□□□ 1.62
LYSMD4-210ENST00000545021 PODXL2Q9NZ53 605 aa25.14■■□□□ 1.61
LYSMD4-210ENST00000545021 GCC2Q8IWJ2 1684 aa25.13■■□□□ 1.61
LYSMD4-210ENST00000545021 HSP90AA1P07900 732 aaKnown RBP25.12■■□□□ 1.61
LYSMD4-210ENST00000545021 NPATQ14207 1427 aa25.09■■□□□ 1.61
LYSMD4-210ENST00000545021 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
LYSMD4-210ENST00000545021 TMC1Q8TDI8 760 aa25.09■■□□□ 1.61
LYSMD4-210ENST00000545021 ZC3H13Q5T200 1668 aaKnown RBP25.09■■□□□ 1.61
LYSMD4-210ENST00000545021 LMTK3Q96Q04 1460 aa25.09■■□□□ 1.61
LYSMD4-210ENST00000545021 NBPF8Q3BBV2 869 aa25.08■■□□□ 1.61
LYSMD4-210ENST00000545021 PDE3BQ13370 1112 aa25.08■■□□□ 1.61
LYSMD4-210ENST00000545021 NAP1L5Q96NT1 182 aaPredicted RBP25.08■■□□□ 1.61
LYSMD4-210ENST00000545021 ABCC5O15440 1437 aa25.08■■□□□ 1.61
LYSMD4-210ENST00000545021 DAPK1P53355 1430 aa25.07■■□□□ 1.6
LYSMD4-210ENST00000545021 TSPY4P0CV99 314 aa25.07■■□□□ 1.6
LYSMD4-210ENST00000545021 TSPY10P0CW01 314 aa25.07■■□□□ 1.6
LYSMD4-210ENST00000545021 PNNQ9H307 717 aaKnown RBP25.07■■□□□ 1.6
LYSMD4-210ENST00000545021 ADGRL2O95490 1459 aa25.06■■□□□ 1.6
LYSMD4-210ENST00000545021 CLCN1P35523 988 aa25.06■■□□□ 1.6
LYSMD4-210ENST00000545021 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
LYSMD4-210ENST00000545021 FAM161AQ3B820 660 aa25.05■■□□□ 1.6
LYSMD4-210ENST00000545021 KDM5DQ9BY66 1539 aa25.05■■□□□ 1.6
LYSMD4-210ENST00000545021 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
LYSMD4-210ENST00000545021 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
LYSMD4-210ENST00000545021 SENP3-EIF4A1A0A087X0R7 540 aa25.03■■□□□ 1.6
LYSMD4-210ENST00000545021 POGKQ9P215 609 aa25.03■■□□□ 1.6
LYSMD4-210ENST00000545021 BRD4O60885 1362 aaPredicted RBP25.03■■□□□ 1.6
LYSMD4-210ENST00000545021 ERBINQ96RT1 1412 aa25.02■■□□□ 1.6
LYSMD4-210ENST00000545021 KTN1Q86UP2 1357 aaKnown RBP25.02■■□□□ 1.6
LYSMD4-210ENST00000545021 SKAP1Q86WV1 359 aa25.02■■□□□ 1.6
LYSMD4-210ENST00000545021 MLECQ14165 292 aa25.01■■□□□ 1.59
LYSMD4-210ENST00000545021 C8orf34Q49A92 452 aa25.01■■□□□ 1.59
LYSMD4-210ENST00000545021 KDM2BQ8NHM5 1336 aa25■■□□□ 1.59
LYSMD4-210ENST00000545021 DEPDC5O75140 1603 aa25■■□□□ 1.59
LYSMD4-210ENST00000545021 ZNF142P52746 1687 aaPredicted RBP25■■□□□ 1.59
LYSMD4-210ENST00000545021 MPHOSPH9Q99550 1183 aa24.99■■□□□ 1.59
LYSMD4-210ENST00000545021 MROH1Q8NDA8 1641 aa24.99■■□□□ 1.59
LYSMD4-210ENST00000545021 ROCK2O75116 1388 aaKnown RBP24.97■■□□□ 1.59
LYSMD4-210ENST00000545021 CRBNQ96SW2 442 aa24.96■■□□□ 1.59
LYSMD4-210ENST00000545021 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
LYSMD4-210ENST00000545021 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
LYSMD4-210ENST00000545021 CENPQQ7L2Z9 268 aaPredicted RBP24.95■■□□□ 1.58
LYSMD4-210ENST00000545021 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
LYSMD4-210ENST00000545021 ANKRD30BQ9BXX2 1392 aa24.94■■□□□ 1.58
LYSMD4-210ENST00000545021 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
LYSMD4-210ENST00000545021 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
LYSMD4-210ENST00000545021 CNGB1Q14028 1251 aaPredicted RBP24.93■■□□□ 1.58
LYSMD4-210ENST00000545021 ZMYM3Q14202 1370 aa24.93■■□□□ 1.58
LYSMD4-210ENST00000545021 PZPP20742 1482 aa24.92■■□□□ 1.58
LYSMD4-210ENST00000545021 ANKRD30AQ9BXX3 1397 aa24.92■■□□□ 1.58
LYSMD4-210ENST00000545021 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
LYSMD4-210ENST00000545021 RRP7BPQ9NSQ0 103 aa24.92■■□□□ 1.58
LYSMD4-210ENST00000545021 ABCC3O15438 1527 aa24.91■■□□□ 1.58
LYSMD4-210ENST00000545021 MYO3AQ8NEV4 1616 aa24.9■■□□□ 1.58
LYSMD4-210ENST00000545021 VWDEQ8N2E2 1590 aa24.89■■□□□ 1.58
LYSMD4-210ENST00000545021 LMTK2Q8IWU2 1503 aa24.88■■□□□ 1.57
LYSMD4-210ENST00000545021 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
LYSMD4-210ENST00000545021 CENPJQ9HC77 1338 aaPredicted RBP24.88■■□□□ 1.57
LYSMD4-210ENST00000545021 PLIN1O60240 522 aa24.87■■□□□ 1.57
LYSMD4-210ENST00000545021 USP47Q96K76 1375 aa24.87■■□□□ 1.57
LYSMD4-210ENST00000545021 RALBP1Q15311 655 aa24.87■■□□□ 1.57
LYSMD4-210ENST00000545021 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
LYSMD4-210ENST00000545021 FSD2A1L4K1 749 aa24.86■■□□□ 1.57
LYSMD4-210ENST00000545021 XRCC6P12956 609 aaKnown RBP eCLIP24.86■■□□□ 1.57
LYSMD4-210ENST00000545021 KIF3BO15066 747 aa24.85■■□□□ 1.57
LYSMD4-210ENST00000545021 ARHGAP31Q2M1Z3 1444 aa24.84■■□□□ 1.57
LYSMD4-210ENST00000545021 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
LYSMD4-210ENST00000545021 GOLGA6L3A6NEY3 463 aa24.83■■□□□ 1.56
LYSMD4-210ENST00000545021 VIRMAQ69YN4 1812 aaKnown RBP24.82■■□□□ 1.56
LYSMD4-210ENST00000545021 CEP152O94986 1710 aa24.82■■□□□ 1.56
LYSMD4-210ENST00000545021 FOXD1Q16676 465 aa24.82■■□□□ 1.56
LYSMD4-210ENST00000545021 GGT6Q6P531 493 aa24.81■■□□□ 1.56
LYSMD4-210ENST00000545021 POLR3GLQ9BT43 218 aa24.81■■□□□ 1.56
LYSMD4-210ENST00000545021 CEP170BQ9Y4F5 1589 aaPredicted RBP24.81■■□□□ 1.56
LYSMD4-210ENST00000545021 UNC13BO14795 1591 aa24.8■■□□□ 1.56
LYSMD4-210ENST00000545021 INSRP06213 1382 aa24.8■■□□□ 1.56
LYSMD4-210ENST00000545021 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
LYSMD4-210ENST00000545021 CDCA7LQ96GN5 454 aa24.8■■□□□ 1.56
LYSMD4-210ENST00000545021 PLA2R1Q13018 1463 aa24.8■■□□□ 1.56
LYSMD4-210ENST00000545021 A2ML1A8K2U0 1454 aa24.79■■□□□ 1.56
LYSMD4-210ENST00000545021 STRCQ7RTU9 1775 aa24.79■■□□□ 1.56
LYSMD4-210ENST00000545021 PDCL3Q9H2J4 239 aa24.78■■□□□ 1.56
LYSMD4-210ENST00000545021 BECN1Q14457 450 aa24.78■■□□□ 1.56
LYSMD4-210ENST00000545021 CHIC2Q9UKJ5 165 aa24.77■■□□□ 1.56
LYSMD4-210ENST00000545021 NLRP1Q9C000 1473 aa24.77■■□□□ 1.56
LYSMD4-210ENST00000545021 TPM2P07951 284 aa24.77■■□□□ 1.56
LYSMD4-210ENST00000545021 CALD1Q05682 793 aaKnown RBP24.76■■□□□ 1.55
LYSMD4-210ENST00000545021 PTPRTO14522 1441 aa24.75■■□□□ 1.55
LYSMD4-210ENST00000545021 USP19O94966 1318 aa24.75■■□□□ 1.55
LYSMD4-210ENST00000545021 NLRP13Q86W25 1043 aa24.74■■□□□ 1.55
LYSMD4-210ENST00000545021 E9PCH4 1651 aa24.73■■□□□ 1.55
LYSMD4-210ENST00000545021 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
LYSMD4-210ENST00000545021 TNRQ92752 1358 aa24.73■■□□□ 1.55
LYSMD4-210ENST00000545021 ANTXR1Q9H6X2 564 aa24.73■■□□□ 1.55
LYSMD4-210ENST00000545021 C20orf194Q5TEA3 1177 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms