RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 IFT172Q9UG01 1749 aa16.67■□□□□ 0.26
PAAF1-215ENST00000544909 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
PAAF1-215ENST00000544909 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
PAAF1-215ENST00000544909 KIF1BO60333 1816 aa16.66■□□□□ 0.26
PAAF1-215ENST00000544909 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
PAAF1-215ENST00000544909 PIK3C2GO75747 1445 aa16.66■□□□□ 0.26
PAAF1-215ENST00000544909 PANK3Q9H999 370 aa16.65■□□□□ 0.26
PAAF1-215ENST00000544909 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
PAAF1-215ENST00000544909 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
PAAF1-215ENST00000544909 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
PAAF1-215ENST00000544909 POGZQ7Z3K3 1410 aa16.63■□□□□ 0.25
PAAF1-215ENST00000544909 MYOM1P52179 1685 aa16.62■□□□□ 0.25
PAAF1-215ENST00000544909 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
PAAF1-215ENST00000544909 HECW2Q9P2P5 1572 aa16.61■□□□□ 0.25
PAAF1-215ENST00000544909 ABCA6Q8N139 1617 aa16.61■□□□□ 0.25
PAAF1-215ENST00000544909 KIF3BO15066 747 aa16.61■□□□□ 0.25
PAAF1-215ENST00000544909 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
PAAF1-215ENST00000544909 NEO1Q92859 1461 aa16.6■□□□□ 0.25
PAAF1-215ENST00000544909 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
PAAF1-215ENST00000544909 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
PAAF1-215ENST00000544909 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
PAAF1-215ENST00000544909 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
PAAF1-215ENST00000544909 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
PAAF1-215ENST00000544909 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
PAAF1-215ENST00000544909 RPGRIP1LQ68CZ1 1315 aa16.56■□□□□ 0.24
PAAF1-215ENST00000544909 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
PAAF1-215ENST00000544909 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
PAAF1-215ENST00000544909 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
PAAF1-215ENST00000544909 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
PAAF1-215ENST00000544909 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
PAAF1-215ENST00000544909 ZC3H13Q5T200 1668 aaKnown RBP16.53■□□□□ 0.24
PAAF1-215ENST00000544909 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
PAAF1-215ENST00000544909 PPP2R1AP30153 589 aa16.52■□□□□ 0.24
PAAF1-215ENST00000544909 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.24
PAAF1-215ENST00000544909 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
PAAF1-215ENST00000544909 NPATQ14207 1427 aa16.52■□□□□ 0.24
PAAF1-215ENST00000544909 ARHGAP31Q2M1Z3 1444 aa16.52■□□□□ 0.24
PAAF1-215ENST00000544909 PPLO60437 1756 aa16.52■□□□□ 0.24
PAAF1-215ENST00000544909 OSCARQ8IYS5 282 aa16.52■□□□□ 0.23
PAAF1-215ENST00000544909 ABCC3O15438 1527 aa16.51■□□□□ 0.23
PAAF1-215ENST00000544909 USP32Q8NFA0 1604 aa16.51■□□□□ 0.23
PAAF1-215ENST00000544909 PIK3C2BO00750 1634 aa16.5■□□□□ 0.23
PAAF1-215ENST00000544909 UGGT1Q9NYU2 1555 aa16.5■□□□□ 0.23
PAAF1-215ENST00000544909 NOS1P29475 1434 aa16.5■□□□□ 0.23
PAAF1-215ENST00000544909 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
PAAF1-215ENST00000544909 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
PAAF1-215ENST00000544909 ADGRB1O14514 1584 aa16.49■□□□□ 0.23
PAAF1-215ENST00000544909 MYT1LQ9UL68 1186 aa16.48■□□□□ 0.23
PAAF1-215ENST00000544909 CAMSAP1Q5T5Y3 1602 aa16.47■□□□□ 0.23
PAAF1-215ENST00000544909 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
PAAF1-215ENST00000544909 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
PAAF1-215ENST00000544909 TCERG1O14776 1098 aaKnown RBP16.45■□□□□ 0.22
PAAF1-215ENST00000544909 MS4A1P11836 297 aa16.45■□□□□ 0.22
PAAF1-215ENST00000544909 C14orf93Q9H972 538 aaKnown RBP16.45■□□□□ 0.22
PAAF1-215ENST00000544909 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
PAAF1-215ENST00000544909 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
PAAF1-215ENST00000544909 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
PAAF1-215ENST00000544909 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
PAAF1-215ENST00000544909 MSH5O43196 834 aa16.43■□□□□ 0.22
PAAF1-215ENST00000544909 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
PAAF1-215ENST00000544909 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
PAAF1-215ENST00000544909 GLI2P10070 1586 aa16.42■□□□□ 0.22
PAAF1-215ENST00000544909 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
PAAF1-215ENST00000544909 NSD2O96028 1365 aa16.42■□□□□ 0.22
PAAF1-215ENST00000544909 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
PAAF1-215ENST00000544909 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
PAAF1-215ENST00000544909 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
PAAF1-215ENST00000544909 RICTORQ6R327 1708 aa16.41■□□□□ 0.22
PAAF1-215ENST00000544909 ERICH6Q7L0X2 663 aa16.4■□□□□ 0.22
PAAF1-215ENST00000544909 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
PAAF1-215ENST00000544909 PLEKHH1Q9ULM0 1364 aa16.4■□□□□ 0.22
PAAF1-215ENST00000544909 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
PAAF1-215ENST00000544909 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
PAAF1-215ENST00000544909 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
PAAF1-215ENST00000544909 CDCA7LQ96GN5 454 aa16.39■□□□□ 0.21
PAAF1-215ENST00000544909 VGFO15240 615 aaPredicted RBP16.38■□□□□ 0.21
PAAF1-215ENST00000544909 ANP32AP39687 249 aaKnown RBP16.38■□□□□ 0.21
PAAF1-215ENST00000544909 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
PAAF1-215ENST00000544909 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
PAAF1-215ENST00000544909 REREQ9P2R6 1566 aa16.36■□□□□ 0.21
PAAF1-215ENST00000544909 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
PAAF1-215ENST00000544909 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
PAAF1-215ENST00000544909 E9PSI1 815 aa16.35■□□□□ 0.21
PAAF1-215ENST00000544909 SIGLEC1Q9BZZ2 1709 aa16.34■□□□□ 0.21
PAAF1-215ENST00000544909 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.21
PAAF1-215ENST00000544909 NSD3Q9BZ95 1437 aa16.32■□□□□ 0.2
PAAF1-215ENST00000544909 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
PAAF1-215ENST00000544909 NOP58Q9Y2X3 529 aaKnown RBP16.32■□□□□ 0.2
PAAF1-215ENST00000544909 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
PAAF1-215ENST00000544909 ANKRD36BQ8N2N9 1353 aa16.32■□□□□ 0.2
PAAF1-215ENST00000544909 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
PAAF1-215ENST00000544909 IPO9Q96P70 1041 aaKnown RBP16.31■□□□□ 0.2
PAAF1-215ENST00000544909 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
PAAF1-215ENST00000544909 GGT6Q6P531 493 aa16.31■□□□□ 0.2
PAAF1-215ENST00000544909 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
PAAF1-215ENST00000544909 AAMPQ13685 434 aa16.3■□□□□ 0.2
PAAF1-215ENST00000544909 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
PAAF1-215ENST00000544909 MED14O60244 1454 aa16.29■□□□□ 0.2
PAAF1-215ENST00000544909 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
PAAF1-215ENST00000544909 AGLP35573 1532 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms