RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 CHIC2Q9UKJ5 165 aa14.32□□□□□ -0.12
CIT-216ENST00000544872 ANKRD30AQ9BXX3 1397 aa14.32□□□□□ -0.12
CIT-216ENST00000544872 KIF3BO15066 747 aa14.31□□□□□ -0.12
CIT-216ENST00000544872 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
CIT-216ENST00000544872 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
CIT-216ENST00000544872 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
CIT-216ENST00000544872 DHX29Q7Z478 1369 aaKnown RBP14.29□□□□□ -0.12
CIT-216ENST00000544872 NHSL1Q5SYE7 1610 aa14.28□□□□□ -0.12
CIT-216ENST00000544872 TRPC5Q9UL62 973 aaPredicted RBP14.28□□□□□ -0.12
CIT-216ENST00000544872 PRDM15P57071 1507 aaPredicted RBP14.27□□□□□ -0.12
CIT-216ENST00000544872 BLMP54132 1417 aaPredicted RBP14.27□□□□□ -0.12
CIT-216ENST00000544872 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 ARHGEF5Q12774 1597 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 ABCC5O15440 1437 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 DAPK1P53355 1430 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 USP21Q9UK80 565 aa14.26□□□□□ -0.13
CIT-216ENST00000544872 C1QTNF8P60827 252 aa14.25□□□□□ -0.13
CIT-216ENST00000544872 KIF15Q9NS87 1388 aa14.24□□□□□ -0.13
CIT-216ENST00000544872 BCANQ96GW7 911 aa14.24□□□□□ -0.13
CIT-216ENST00000544872 INO80Q9ULG1 1556 aaPredicted RBP14.24□□□□□ -0.13
CIT-216ENST00000544872 ABCC3O15438 1527 aa14.24□□□□□ -0.13
CIT-216ENST00000544872 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
CIT-216ENST00000544872 ADGBQ8N7X0 1667 aa14.23□□□□□ -0.13
CIT-216ENST00000544872 EP400Q96L91 3159 aa14.22□□□□□ -0.13
CIT-216ENST00000544872 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
CIT-216ENST00000544872 KANK1Q14678 1352 aa14.22□□□□□ -0.13
CIT-216ENST00000544872 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
CIT-216ENST00000544872 NKTRP30414 1462 aaKnown RBP14.21□□□□□ -0.13
CIT-216ENST00000544872 ATF3P18847 181 aa14.21□□□□□ -0.13
CIT-216ENST00000544872 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
CIT-216ENST00000544872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.13
CIT-216ENST00000544872 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
CIT-216ENST00000544872 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
CIT-216ENST00000544872 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
CIT-216ENST00000544872 LRRC59Q96AG4 307 aaKnown RBP14.19□□□□□ -0.14
CIT-216ENST00000544872 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
CIT-216ENST00000544872 DIP2AQ14689 1571 aa14.17□□□□□ -0.14
CIT-216ENST00000544872 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
CIT-216ENST00000544872 SLIT1O75093 1534 aa14.17□□□□□ -0.14
CIT-216ENST00000544872 R3HDM1Q15032 1099 aaKnown RBP14.17□□□□□ -0.14
CIT-216ENST00000544872 UBR1Q8IWV7 1749 aa14.17□□□□□ -0.14
CIT-216ENST00000544872 DUOX2Q9NRD8 1548 aa14.16□□□□□ -0.14
CIT-216ENST00000544872 BRINP3Q76B58 766 aa14.16□□□□□ -0.14
CIT-216ENST00000544872 MAST1Q9Y2H9 1570 aa14.16□□□□□ -0.14
CIT-216ENST00000544872 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
CIT-216ENST00000544872 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
CIT-216ENST00000544872 ERVK-7P63135 1459 aa14.14□□□□□ -0.15
CIT-216ENST00000544872 BCL9LQ86UU0 1499 aa14.14□□□□□ -0.15
CIT-216ENST00000544872 BAG6P46379 1132 aa14.13□□□□□ -0.15
CIT-216ENST00000544872 PPP1R1BQ9UD71 204 aaPredicted RBP14.13□□□□□ -0.15
CIT-216ENST00000544872 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
CIT-216ENST00000544872 ADGRL2O95490 1459 aa14.12□□□□□ -0.15
CIT-216ENST00000544872 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
CIT-216ENST00000544872 PNPLA6Q8IY17 1366 aa14.11□□□□□ -0.15
CIT-216ENST00000544872 ATRNO75882 1429 aa14.11□□□□□ -0.15
CIT-216ENST00000544872 C19orf44Q9H6X5 657 aa14.11□□□□□ -0.15
CIT-216ENST00000544872 CFAP65Q6ZU64 1925 aaKnown RBP14.09□□□□□ -0.15
CIT-216ENST00000544872 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
CIT-216ENST00000544872 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
CIT-216ENST00000544872 NUP155O75694 1391 aa14.07□□□□□ -0.16
CIT-216ENST00000544872 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
CIT-216ENST00000544872 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
CIT-216ENST00000544872 DDX17Q92841 729 aaKnown RBP14.05□□□□□ -0.16
CIT-216ENST00000544872 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
CIT-216ENST00000544872 ASXL1Q8IXJ9 1541 aa14.04□□□□□ -0.16
CIT-216ENST00000544872 TET3O43151 1660 aa14.03□□□□□ -0.16
CIT-216ENST00000544872 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.02□□□□□ -0.16
CIT-216ENST00000544872 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.17
CIT-216ENST00000544872 CAPN15O75808 1086 aa14.02□□□□□ -0.17
CIT-216ENST00000544872 EN1Q05925 392 aaPredicted RBP14.02□□□□□ -0.17
CIT-216ENST00000544872 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
CIT-216ENST00000544872 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
CIT-216ENST00000544872 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
CIT-216ENST00000544872 EIF2AK4Q9P2K8 1649 aaKnown RBP14.01□□□□□ -0.17
CIT-216ENST00000544872 UNC13BO14795 1591 aa14.01□□□□□ -0.17
CIT-216ENST00000544872 NAIPQ13075 1403 aa14.01□□□□□ -0.17
CIT-216ENST00000544872 PPP1R15AO75807 674 aaPredicted RBP14□□□□□ -0.17
CIT-216ENST00000544872 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
CIT-216ENST00000544872 SLC52A1Q9NWF4 448 aa13.99□□□□□ -0.17
CIT-216ENST00000544872 HDGFP51858 240 aaKnown RBP13.98□□□□□ -0.17
CIT-216ENST00000544872 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
CIT-216ENST00000544872 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
CIT-216ENST00000544872 NINLQ9Y2I6 1382 aa13.97□□□□□ -0.17
CIT-216ENST00000544872 SLC34A2O95436 690 aa13.97□□□□□ -0.17
CIT-216ENST00000544872 ARHGAP31Q2M1Z3 1444 aa13.97□□□□□ -0.17
CIT-216ENST00000544872 PIK3C2BO00750 1634 aa13.97□□□□□ -0.17
CIT-216ENST00000544872 A0A0G2JS52 829 aa13.96□□□□□ -0.17
CIT-216ENST00000544872 MYT1Q01538 1121 aa13.96□□□□□ -0.17
CIT-216ENST00000544872 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
CIT-216ENST00000544872 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
CIT-216ENST00000544872 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
CIT-216ENST00000544872 CEP350Q5VT06 3117 aa13.94□□□□□ -0.18
CIT-216ENST00000544872 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
CIT-216ENST00000544872 MPHOSPH9Q99550 1183 aa13.93□□□□□ -0.18
CIT-216ENST00000544872 RALGAPBQ86X10 1494 aa13.93□□□□□ -0.18
CIT-216ENST00000544872 CCDC9Q9Y3X0 531 aaKnown RBP13.92□□□□□ -0.18
CIT-216ENST00000544872 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
CIT-216ENST00000544872 RPRD2Q5VT52 1461 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms