RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
SP140-214ENST00000544128 CCDC144AA2RUR9 1427 aa13.76□□□□□ -0.21
SP140-214ENST00000544128 NOS1P29475 1434 aa13.76□□□□□ -0.21
SP140-214ENST00000544128 HSPA1LP34931 641 aa13.76□□□□□ -0.21
SP140-214ENST00000544128 C3P01024 1663 aa13.75□□□□□ -0.21
SP140-214ENST00000544128 ZNF335Q9H4Z2 1342 aaPredicted RBP13.74□□□□□ -0.21
SP140-214ENST00000544128 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
SP140-214ENST00000544128 SYNMO15061 1565 aa13.74□□□□□ -0.21
SP140-214ENST00000544128 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
SP140-214ENST00000544128 POTEDQ86YR6 584 aa13.73□□□□□ -0.21
SP140-214ENST00000544128 TNRQ92752 1358 aa13.71□□□□□ -0.21
SP140-214ENST00000544128 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
SP140-214ENST00000544128 SLC52A1Q9NWF4 448 aa13.71□□□□□ -0.21
SP140-214ENST00000544128 TONSLQ96HA7 1378 aa13.71□□□□□ -0.22
SP140-214ENST00000544128 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
SP140-214ENST00000544128 IDI1Q13907 227 aa13.7□□□□□ -0.22
SP140-214ENST00000544128 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
SP140-214ENST00000544128 KIF1BO60333 1816 aa13.69□□□□□ -0.22
SP140-214ENST00000544128 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
SP140-214ENST00000544128 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
SP140-214ENST00000544128 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
SP140-214ENST00000544128 L3MBTL2Q969R5 705 aa13.67□□□□□ -0.22
SP140-214ENST00000544128 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
SP140-214ENST00000544128 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
SP140-214ENST00000544128 ZNF326Q5BKZ1 582 aaKnown RBP13.66□□□□□ -0.22
SP140-214ENST00000544128 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
SP140-214ENST00000544128 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
SP140-214ENST00000544128 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
SP140-214ENST00000544128 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
SP140-214ENST00000544128 DCAF11Q8TEB1 546 aa13.63□□□□□ -0.23
SP140-214ENST00000544128 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
SP140-214ENST00000544128 ADGRB3O60242 1522 aa13.63□□□□□ -0.23
SP140-214ENST00000544128 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
SP140-214ENST00000544128 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
SP140-214ENST00000544128 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
SP140-214ENST00000544128 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
SP140-214ENST00000544128 TOM1O60784 492 aa13.6□□□□□ -0.23
SP140-214ENST00000544128 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
SP140-214ENST00000544128 RPGRIP1LQ68CZ1 1315 aa13.59□□□□□ -0.23
SP140-214ENST00000544128 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
SP140-214ENST00000544128 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.24
SP140-214ENST00000544128 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
SP140-214ENST00000544128 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
SP140-214ENST00000544128 THEMISQ8N1K5 641 aaPredicted RBP13.57□□□□□ -0.24
SP140-214ENST00000544128 RGS17Q9UGC6 210 aaPredicted RBP13.57□□□□□ -0.24
SP140-214ENST00000544128 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 IFT172Q9UG01 1749 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 PPLO60437 1756 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 STAC3Q96MF2 364 aa13.56□□□□□ -0.24
SP140-214ENST00000544128 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
SP140-214ENST00000544128 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
SP140-214ENST00000544128 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
SP140-214ENST00000544128 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
SP140-214ENST00000544128 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
SP140-214ENST00000544128 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.54□□□□□ -0.24
SP140-214ENST00000544128 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
SP140-214ENST00000544128 ZFYVE9O95405 1425 aa13.53□□□□□ -0.24
SP140-214ENST00000544128 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
SP140-214ENST00000544128 MYOM2P54296 1465 aa13.53□□□□□ -0.24
SP140-214ENST00000544128 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 SLIT1O75093 1534 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 LTKP29376 864 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
SP140-214ENST00000544128 NRXN1Q9ULB1 1477 aa13.49□□□□□ -0.25
SP140-214ENST00000544128 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
SP140-214ENST00000544128 BCANQ96GW7 911 aa13.49□□□□□ -0.25
SP140-214ENST00000544128 CPS1P31327 1500 aa13.49□□□□□ -0.25
SP140-214ENST00000544128 CFAP70Q5T0N1 1121 aa13.48□□□□□ -0.25
SP140-214ENST00000544128 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
SP140-214ENST00000544128 PIK3C2GO75747 1445 aa13.47□□□□□ -0.25
SP140-214ENST00000544128 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
SP140-214ENST00000544128 NBPF1Q3BBV0 1214 aa13.47□□□□□ -0.25
SP140-214ENST00000544128 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
SP140-214ENST00000544128 POTEAQ6S8J7 498 aa13.46□□□□□ -0.25
SP140-214ENST00000544128 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
SP140-214ENST00000544128 RALGAPBQ86X10 1494 aa13.46□□□□□ -0.25
SP140-214ENST00000544128 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.25
SP140-214ENST00000544128 ROCK2O75116 1388 aaKnown RBP13.45□□□□□ -0.26
SP140-214ENST00000544128 PLEKHG1Q9ULL1 1385 aa13.45□□□□□ -0.26
SP140-214ENST00000544128 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
SP140-214ENST00000544128 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
SP140-214ENST00000544128 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
SP140-214ENST00000544128 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
SP140-214ENST00000544128 KIAA1210Q9ULL0 1709 aa13.44□□□□□ -0.26
SP140-214ENST00000544128 SRCAPQ6ZRS2 3230 aa13.43□□□□□ -0.26
SP140-214ENST00000544128 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
SP140-214ENST00000544128 IQGAP1P46940 1657 aa13.43□□□□□ -0.26
SP140-214ENST00000544128 SETBP1Q9Y6X0 1596 aa13.42□□□□□ -0.26
SP140-214ENST00000544128 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
SP140-214ENST00000544128 LAMC1P11047 1609 aa13.42□□□□□ -0.26
SP140-214ENST00000544128 NRXN3Q9Y4C0 1643 aa13.42□□□□□ -0.26
SP140-214ENST00000544128 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
SP140-214ENST00000544128 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.26
SP140-214ENST00000544128 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
SP140-214ENST00000544128 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
SP140-214ENST00000544128 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms