RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
SCFD1-207ENST00000544052 FAM198AQ9UFP1 575 aa7.21□□□□□ -1.26
SCFD1-207ENST00000544052 PROCA1Q8NCQ7 364 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-207ENST00000544052 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
SCFD1-207ENST00000544052 POLR3EQ9NVU0 708 aa7.2□□□□□ -1.26
SCFD1-207ENST00000544052 RBM27Q9P2N5 1060 aaKnown RBP7.2□□□□□ -1.26
SCFD1-207ENST00000544052 HOMEZQ8IX15 550 aa7.19□□□□□ -1.26
SCFD1-207ENST00000544052 C3orf80F5H4A9 247 aa7.18□□□□□ -1.26
SCFD1-207ENST00000544052 SKIV2LQ15477 1246 aaKnown RBP7.18□□□□□ -1.26
SCFD1-207ENST00000544052 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-207ENST00000544052 FLIIQ13045 1269 aa7.18□□□□□ -1.26
SCFD1-207ENST00000544052 ZBED2Q9BTP6 218 aa7.18□□□□□ -1.26
SCFD1-207ENST00000544052 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
SCFD1-207ENST00000544052 TSKSQ9UJT2 592 aa7.17□□□□□ -1.26
SCFD1-207ENST00000544052 BHMG1C9JSJ3 638 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-207ENST00000544052 MYSM1Q5VVJ2 828 aa7.16□□□□□ -1.26
SCFD1-207ENST00000544052 CLUAP1Q96AJ1 413 aa7.16□□□□□ -1.26
SCFD1-207ENST00000544052 C1orf115Q9H7X2 142 aa7.16□□□□□ -1.26
SCFD1-207ENST00000544052 RCCD1A6NED2 376 aa7.16□□□□□ -1.26
SCFD1-207ENST00000544052 ARID3CA6NKF2 412 aa7.16□□□□□ -1.26
SCFD1-207ENST00000544052 GOLGA8CPA6NN73 597 aa7.15□□□□□ -1.26
SCFD1-207ENST00000544052 EYA1Q99502 592 aa7.15□□□□□ -1.26
SCFD1-207ENST00000544052 PTPN5P54829 565 aa7.15□□□□□ -1.27
SCFD1-207ENST00000544052 NUDT18Q6ZVK8 323 aa7.15□□□□□ -1.27
SCFD1-207ENST00000544052 MRPL50Q8N5N7 158 aaKnown RBP7.15□□□□□ -1.27
SCFD1-207ENST00000544052 NBPF3Q9H094 633 aa7.15□□□□□ -1.27
SCFD1-207ENST00000544052 FBXO31Q5XUX0 539 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-207ENST00000544052 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCFD1-207ENST00000544052 TBC1D2Q9BYX2 928 aa7.14□□□□□ -1.27
SCFD1-207ENST00000544052 MCM6Q14566 821 aa7.13□□□□□ -1.27
SCFD1-207ENST00000544052 THSD4Q6ZMP0 1018 aa7.13□□□□□ -1.27
SCFD1-207ENST00000544052 ARID3AQ99856 593 aa7.13□□□□□ -1.27
SCFD1-207ENST00000544052 PPP1R3GB7ZBB8 358 aa7.13□□□□□ -1.27
SCFD1-207ENST00000544052 WNT2BQ93097 391 aa7.13□□□□□ -1.27
SCFD1-207ENST00000544052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
SCFD1-207ENST00000544052 SMAPO00193 183 aa7.12□□□□□ -1.27
SCFD1-207ENST00000544052 CLK2P49760 499 aaKnown RBP7.12□□□□□ -1.27
SCFD1-207ENST00000544052 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
SCFD1-207ENST00000544052 PROX2Q3B8N5 592 aa7.12□□□□□ -1.27
SCFD1-207ENST00000544052 LIMD1Q9UGP4 676 aa7.12□□□□□ -1.27
SCFD1-207ENST00000544052 PNMA3Q9UL41 463 aa7.12□□□□□ -1.27
SCFD1-207ENST00000544052 DDX11L8A8MPP1 907 aa7.11□□□□□ -1.27
SCFD1-207ENST00000544052 APBB1O00213 710 aa7.11□□□□□ -1.27
SCFD1-207ENST00000544052 SPIRE2Q8WWL2 714 aa7.11□□□□□ -1.27
SCFD1-207ENST00000544052 TATDN2Q93075 761 aa7.11□□□□□ -1.27
SCFD1-207ENST00000544052 TRIM6-TRIM34B2RNG4 842 aa7.1□□□□□ -1.27
SCFD1-207ENST00000544052 CD46P15529 392 aa7.1□□□□□ -1.27
SCFD1-207ENST00000544052 POM121Q96HA1 1249 aa7.09□□□□□ -1.27
SCFD1-207ENST00000544052 RABGEF1Q9UJ41 708 aa7.09□□□□□ -1.27
SCFD1-207ENST00000544052 DNAJB2P25686 324 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 IFFO2Q5TF58 517 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 NBPF26B4DH59 902 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 RFC5P40937 340 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 PACS2Q86VP3 889 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 TMEM134Q9H6X4 195 aa7.08□□□□□ -1.28
SCFD1-207ENST00000544052 A6NJR5 290 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 TRAK2O60296 914 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 DIXDC1Q155Q3 683 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 MOXD2PA6NHM9 499 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 SNRKQ9NRH2 765 aa7.07□□□□□ -1.28
SCFD1-207ENST00000544052 NDUFV2P19404 249 aa7.06□□□□□ -1.28
SCFD1-207ENST00000544052 SULF1Q8IWU6 871 aa7.06□□□□□ -1.28
SCFD1-207ENST00000544052 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 KIAA1468Q9P260 1216 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 RGS20O76081 388 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 QPCTQ16769 361 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 RSBN1LQ6PCB5 846 aaPredicted RBP7.05□□□□□ -1.28
SCFD1-207ENST00000544052 PCDHB15Q9Y5E8 787 aa7.05□□□□□ -1.28
SCFD1-207ENST00000544052 RDH13Q8NBN7 331 aa7.04□□□□□ -1.28
SCFD1-207ENST00000544052 SPTLC1O15269 473 aa7.04□□□□□ -1.28
SCFD1-207ENST00000544052 PPP2R2DQ66LE6 453 aa7.04□□□□□ -1.28
SCFD1-207ENST00000544052 ZNF777Q9ULD5 760 aaPredicted RBP7.04□□□□□ -1.28
SCFD1-207ENST00000544052 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
SCFD1-207ENST00000544052 PROSER2Q86WR7 435 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-207ENST00000544052 A0A0G2JS52 829 aa7.02□□□□□ -1.29
SCFD1-207ENST00000544052 FNBP4Q8N3X1 1017 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-207ENST00000544052 SEPT9Q9UHD8 586 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-207ENST00000544052 CCDC82Q8N4S0 544 aa7.02□□□□□ -1.29
SCFD1-207ENST00000544052 COG6Q9Y2V7 657 aa7.02□□□□□ -1.29
SCFD1-207ENST00000544052 RAD21O60216 631 aa7.01□□□□□ -1.29
SCFD1-207ENST00000544052 KDM4AO75164 1064 aa7.01□□□□□ -1.29
SCFD1-207ENST00000544052 BANK1Q8NDB2 785 aa7.01□□□□□ -1.29
SCFD1-207ENST00000544052 SOWAHBA6NEL2 793 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 SLC10A3P09131 477 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 BCAMP50895 628 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 TMEM259Q4ZIN3 620 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 RTL5Q5HYW3 569 aaPredicted RBP7□□□□□ -1.29
SCFD1-207ENST00000544052 SWT1Q5T5J6 900 aaKnown RBP7□□□□□ -1.29
SCFD1-207ENST00000544052 MTMR14Q8NCE2 650 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 CABLES1Q8TDN4 633 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 HLA-CQ95604 372 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 ZFRQ96KR1 1074 aaKnown RBP7□□□□□ -1.29
SCFD1-207ENST00000544052 LILRB3O75022 631 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 TUSC1Q2TAM9 212 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 NYAP1Q6ZVC0 841 aa7□□□□□ -1.29
SCFD1-207ENST00000544052 GCGRP47871 477 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms