RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SLC52A1Q9NWF4 448 aa27.65■■■□□ 2.02
COPS7A-218ENST00000543939 RPGRIP1LQ68CZ1 1315 aa27.64■■■□□ 2.02
COPS7A-218ENST00000543939 ADGRF5Q8IZF2 1346 aa27.63■■■□□ 2.01
COPS7A-218ENST00000543939 IDI1Q13907 227 aa27.62■■■□□ 2.01
COPS7A-218ENST00000543939 MLECQ14165 292 aa27.62■■■□□ 2.01
COPS7A-218ENST00000543939 ANP32CO43423 234 aa27.61■■■□□ 2.01
COPS7A-218ENST00000543939 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
COPS7A-218ENST00000543939 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
COPS7A-218ENST00000543939 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
COPS7A-218ENST00000543939 TMEM131LA2VDJ0 1609 aa27.59■■■□□ 2.01
COPS7A-218ENST00000543939 NEXMIFQ5QGS0 1516 aa27.58■■■□□ 2.01
COPS7A-218ENST00000543939 SCAF11Q99590 1463 aaKnown RBP27.56■■■□□ 2
COPS7A-218ENST00000543939 PIK3C2GO75747 1445 aa27.54■■■□□ 2
COPS7A-218ENST00000543939 CFAP70Q5T0N1 1121 aa27.53■■■□□ 2
COPS7A-218ENST00000543939 TESK2Q96S53 571 aa27.53■■■□□ 2
COPS7A-218ENST00000543939 SETBP1Q9Y6X0 1596 aa27.52■■■□□ 2
COPS7A-218ENST00000543939 ZMYM3Q14202 1370 aa27.51■■□□□ 1.99
COPS7A-218ENST00000543939 ESF1Q9H501 851 aaKnown RBP27.5■■□□□ 1.99
COPS7A-218ENST00000543939 CCER2I3L3R5 266 aa27.5■■□□□ 1.99
COPS7A-218ENST00000543939 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
COPS7A-218ENST00000543939 YTHDC1Q96MU7 727 aaKnown RBP27.47■■□□□ 1.99
COPS7A-218ENST00000543939 POLR3GLQ9BT43 218 aa27.47■■□□□ 1.99
COPS7A-218ENST00000543939 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
COPS7A-218ENST00000543939 C14orf93Q9H972 538 aaKnown RBP27.47■■□□□ 1.99
COPS7A-218ENST00000543939 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
COPS7A-218ENST00000543939 DISP3Q9P2K9 1392 aa27.44■■□□□ 1.98
COPS7A-218ENST00000543939 ADGRB1O14514 1584 aa27.43■■□□□ 1.98
COPS7A-218ENST00000543939 TMF1P82094 1093 aa27.41■■□□□ 1.98
COPS7A-218ENST00000543939 CENPBP07199 599 aaPredicted RBP27.41■■□□□ 1.98
COPS7A-218ENST00000543939 MYO3AQ8NEV4 1616 aa27.4■■□□□ 1.98
COPS7A-218ENST00000543939 A2ML1A8K2U0 1454 aa27.4■■□□□ 1.98
COPS7A-218ENST00000543939 NUTM2DQ5VT03 806 aaPredicted RBP27.39■■□□□ 1.98
COPS7A-218ENST00000543939 PRKRIP1Q9H875 184 aaPredicted RBP27.36■■□□□ 1.97
COPS7A-218ENST00000543939 STAG3Q9UJ98 1225 aa27.36■■□□□ 1.97
COPS7A-218ENST00000543939 FER1L4A9Z1Z3 1794 aa27.35■■□□□ 1.97
COPS7A-218ENST00000543939 TNRQ92752 1358 aa27.35■■□□□ 1.97
COPS7A-218ENST00000543939 KDM5AP29375 1690 aaKnown RBP27.33■■□□□ 1.97
COPS7A-218ENST00000543939 C3P01024 1663 aa27.31■■□□□ 1.96
COPS7A-218ENST00000543939 SLC24A1O60721 1099 aa27.3■■□□□ 1.96
COPS7A-218ENST00000543939 TMEM132EQ6IEE7 984 aa27.3■■□□□ 1.96
COPS7A-218ENST00000543939 SBNO2Q9Y2G9 1366 aa27.29■■□□□ 1.96
COPS7A-218ENST00000543939 RIMS2Q9UQ26 1411 aa27.29■■□□□ 1.96
COPS7A-218ENST00000543939 ASXL1Q8IXJ9 1541 aa27.28■■□□□ 1.96
COPS7A-218ENST00000543939 CDCA8Q53HL2 280 aa27.28■■□□□ 1.96
COPS7A-218ENST00000543939 ARHGEF28Q8N1W1 1705 aaKnown RBP27.27■■□□□ 1.96
COPS7A-218ENST00000543939 UBR1Q8IWV7 1749 aa27.26■■□□□ 1.95
COPS7A-218ENST00000543939 TRAK1Q9UPV9 953 aa27.26■■□□□ 1.95
COPS7A-218ENST00000543939 QRICH2Q9H0J4 1663 aa27.26■■□□□ 1.95
COPS7A-218ENST00000543939 CENPJQ9HC77 1338 aaPredicted RBP27.25■■□□□ 1.95
COPS7A-218ENST00000543939 ALKQ9UM73 1620 aa27.25■■□□□ 1.95
COPS7A-218ENST00000543939 NLRP1Q9C000 1473 aa27.22■■□□□ 1.95
COPS7A-218ENST00000543939 MYOM1P52179 1685 aa27.22■■□□□ 1.95
COPS7A-218ENST00000543939 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
COPS7A-218ENST00000543939 PER1O15534 1290 aaPredicted RBP27.2■■□□□ 1.94
COPS7A-218ENST00000543939 SETD1AO15047 1707 aaKnown RBP27.2■■□□□ 1.94
COPS7A-218ENST00000543939 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.19■■□□□ 1.94
COPS7A-218ENST00000543939 PANK3Q9H999 370 aa27.18■■□□□ 1.94
COPS7A-218ENST00000543939 NRXN3Q9Y4C0 1643 aa27.16■■□□□ 1.94
COPS7A-218ENST00000543939 KTN1Q86UP2 1357 aaKnown RBP27.16■■□□□ 1.94
COPS7A-218ENST00000543939 CCDC184Q52MB2 194 aa27.16■■□□□ 1.94
COPS7A-218ENST00000543939 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
COPS7A-218ENST00000543939 YTHDC2Q9H6S0 1430 aaKnown RBP27.15■■□□□ 1.94
COPS7A-218ENST00000543939 PTPRMP28827 1452 aa27.15■■□□□ 1.94
COPS7A-218ENST00000543939 SENP3Q9H4L4 574 aaPredicted RBP27.14■■□□□ 1.94
COPS7A-218ENST00000543939 HDGFP51858 240 aaKnown RBP27.13■■□□□ 1.93
COPS7A-218ENST00000543939 RIMS1Q86UR5 1692 aaKnown RBP27.11■■□□□ 1.93
COPS7A-218ENST00000543939 RALBP1Q15311 655 aa27.11■■□□□ 1.93
COPS7A-218ENST00000543939 ADAMTSL3P82987 1691 aa27.1■■□□□ 1.93
COPS7A-218ENST00000543939 MRS2Q9HD23 443 aa27.1■■□□□ 1.93
COPS7A-218ENST00000543939 CNGB1Q14028 1251 aaPredicted RBP27.09■■□□□ 1.93
COPS7A-218ENST00000543939 STK26Q9P289 416 aa27.09■■□□□ 1.93
COPS7A-218ENST00000543939 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
COPS7A-218ENST00000543939 TULP4Q9NRJ4 1543 aa27.07■■□□□ 1.92
COPS7A-218ENST00000543939 DLC1Q96QB1 1528 aa27.06■■□□□ 1.92
COPS7A-218ENST00000543939 LRPPRCP42704 1394 aaKnown RBP27.04■■□□□ 1.92
COPS7A-218ENST00000543939 PUS7Q96PZ0 661 aaKnown RBP27.04■■□□□ 1.92
COPS7A-218ENST00000543939 MYBBP1AQ9BQG0 1328 aaKnown RBP27.04■■□□□ 1.92
COPS7A-218ENST00000543939 SLIT1O75093 1534 aa27.04■■□□□ 1.92
COPS7A-218ENST00000543939 ARHGAP23Q9P227 1491 aa27.03■■□□□ 1.92
COPS7A-218ENST00000543939 PLPPR3Q6T4P5 718 aa27.03■■□□□ 1.92
COPS7A-218ENST00000543939 EVC2Q86UK5 1308 aa27.02■■□□□ 1.92
COPS7A-218ENST00000543939 ABCC11Q96J66 1382 aa27■■□□□ 1.91
COPS7A-218ENST00000543939 PRAM1Q96QH2 718 aa27■■□□□ 1.91
COPS7A-218ENST00000543939 KNSTRNQ9Y448 316 aa27■■□□□ 1.91
COPS7A-218ENST00000543939 PLEKHG1Q9ULL1 1385 aa27■■□□□ 1.91
COPS7A-218ENST00000543939 METP08581 1390 aa26.99■■□□□ 1.91
COPS7A-218ENST00000543939 KNDC1Q76NI1 1749 aa26.99■■□□□ 1.91
COPS7A-218ENST00000543939 LTKP29376 864 aa26.99■■□□□ 1.91
COPS7A-218ENST00000543939 BRD4O60885 1362 aaPredicted RBP26.98■■□□□ 1.91
COPS7A-218ENST00000543939 CC2D1BQ5T0F9 858 aaKnown RBP26.98■■□□□ 1.91
COPS7A-218ENST00000543939 POGKQ9P215 609 aa26.98■■□□□ 1.91
COPS7A-218ENST00000543939 SAFB2Q14151 953 aaKnown RBP eCLIP26.97■■□□□ 1.91
COPS7A-218ENST00000543939 AMER1Q5JTC6 1135 aaPredicted RBP26.97■■□□□ 1.91
COPS7A-218ENST00000543939 NPC1L1Q9UHC9 1359 aa26.97■■□□□ 1.91
COPS7A-218ENST00000543939 ADAMTS13Q76LX8 1427 aa26.97■■□□□ 1.91
COPS7A-218ENST00000543939 CEP170BQ9Y4F5 1589 aaPredicted RBP26.96■■□□□ 1.91
COPS7A-218ENST00000543939 TXNDC2Q86VQ3 553 aa26.95■■□□□ 1.9
COPS7A-218ENST00000543939 THEMISQ8N1K5 641 aaPredicted RBP26.95■■□□□ 1.9
COPS7A-218ENST00000543939 FAM9BQ8IZU0 186 aa26.94■■□□□ 1.9
COPS7A-218ENST00000543939 EID1Q9Y6B2 187 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms