RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 TESK2Q96S53 571 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 FOXD4L1Q9NU39 408 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 ANKRD30AQ9BXX3 1397 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 HSCBQ8IWL3 235 aa16.02■□□□□ 0.15
SMG8-202ENST00000543872 DNMT1P26358 1616 aaKnown RBP16.01■□□□□ 0.15
SMG8-202ENST00000543872 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
SMG8-202ENST00000543872 E9PSI1 815 aa16■□□□□ 0.15
SMG8-202ENST00000543872 PMFBP1Q8TBY8 1022 aa16■□□□□ 0.15
SMG8-202ENST00000543872 NLRP1Q9C000 1473 aa15.99■□□□□ 0.15
SMG8-202ENST00000543872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMG8-202ENST00000543872 INSRP06213 1382 aa15.98■□□□□ 0.15
SMG8-202ENST00000543872 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
SMG8-202ENST00000543872 PRDM2Q13029 1718 aa15.98■□□□□ 0.15
SMG8-202ENST00000543872 ZNF608Q9ULD9 1512 aaPredicted RBP15.98■□□□□ 0.15
SMG8-202ENST00000543872 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
SMG8-202ENST00000543872 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
SMG8-202ENST00000543872 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
SMG8-202ENST00000543872 DNMBPQ6XZF7 1577 aa15.97■□□□□ 0.15
SMG8-202ENST00000543872 MSNP26038 577 aaKnown RBP15.97■□□□□ 0.15
SMG8-202ENST00000543872 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
SMG8-202ENST00000543872 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
SMG8-202ENST00000543872 E9PCH4 1651 aa15.96■□□□□ 0.15
SMG8-202ENST00000543872 RLBP1P12271 317 aa15.96■□□□□ 0.15
SMG8-202ENST00000543872 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
SMG8-202ENST00000543872 TSPY4P0CV99 314 aa15.96■□□□□ 0.14
SMG8-202ENST00000543872 TSPY10P0CW01 314 aa15.96■□□□□ 0.14
SMG8-202ENST00000543872 TNPO1Q92973 898 aaKnown RBP15.96■□□□□ 0.14
SMG8-202ENST00000543872 ERBINQ96RT1 1412 aa15.95■□□□□ 0.14
SMG8-202ENST00000543872 RWDD1Q9H446 243 aaPredicted RBP15.95■□□□□ 0.14
SMG8-202ENST00000543872 HSP90AB1P08238 724 aaKnown RBP15.95■□□□□ 0.14
SMG8-202ENST00000543872 BBXQ8WY36 941 aaPredicted RBP15.95■□□□□ 0.14
SMG8-202ENST00000543872 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
SMG8-202ENST00000543872 ZHX1Q9UKY1 873 aaPredicted RBP15.93■□□□□ 0.14
SMG8-202ENST00000543872 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
SMG8-202ENST00000543872 RIPK4P57078 832 aa15.93■□□□□ 0.14
SMG8-202ENST00000543872 ZSCAN30Q86W11 494 aa15.93■□□□□ 0.14
SMG8-202ENST00000543872 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
SMG8-202ENST00000543872 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
SMG8-202ENST00000543872 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
SMG8-202ENST00000543872 ARHGEF12Q9NZN5 1544 aa15.92■□□□□ 0.14
SMG8-202ENST00000543872 NCLP19338 710 aaKnown RBP15.91■□□□□ 0.14
SMG8-202ENST00000543872 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
SMG8-202ENST00000543872 OFD1O75665 1012 aa15.91■□□□□ 0.14
SMG8-202ENST00000543872 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
SMG8-202ENST00000543872 PRAG1Q86YV5 1406 aa15.91■□□□□ 0.14
SMG8-202ENST00000543872 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
SMG8-202ENST00000543872 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
SMG8-202ENST00000543872 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
SMG8-202ENST00000543872 ZNF692Q9BU19 519 aaPredicted RBP15.89■□□□□ 0.13
SMG8-202ENST00000543872 HNRNPMP52272 730 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMG8-202ENST00000543872 CCDC144AA2RUR9 1427 aa15.89■□□□□ 0.13
SMG8-202ENST00000543872 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
SMG8-202ENST00000543872 WWC1Q8IX03 1113 aa15.88■□□□□ 0.13
SMG8-202ENST00000543872 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
SMG8-202ENST00000543872 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
SMG8-202ENST00000543872 CHMP4BQ9H444 224 aaKnown RBP15.88■□□□□ 0.13
SMG8-202ENST00000543872 DDX49Q9Y6V7 483 aaKnown RBP15.88■□□□□ 0.13
SMG8-202ENST00000543872 WDR62O43379 1518 aa15.87■□□□□ 0.13
SMG8-202ENST00000543872 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
SMG8-202ENST00000543872 NAP1L2Q9ULW6 460 aaPredicted RBP15.86■□□□□ 0.13
SMG8-202ENST00000543872 MAGI2Q86UL8 1455 aa15.86■□□□□ 0.13
SMG8-202ENST00000543872 UQCRHLA0A096LP55 91 aa15.86■□□□□ 0.13
SMG8-202ENST00000543872 UQCRHP07919 91 aa15.86■□□□□ 0.13
SMG8-202ENST00000543872 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
SMG8-202ENST00000543872 FTSJ3Q8IY81 847 aaKnown RBP15.86■□□□□ 0.13
SMG8-202ENST00000543872 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
SMG8-202ENST00000543872 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
SMG8-202ENST00000543872 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
SMG8-202ENST00000543872 SSFA2P28290 1259 aa15.84■□□□□ 0.13
SMG8-202ENST00000543872 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
SMG8-202ENST00000543872 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
SMG8-202ENST00000543872 PPP1R9BQ96SB3 815 aa15.83■□□□□ 0.12
SMG8-202ENST00000543872 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.12
SMG8-202ENST00000543872 RAB3GAP1Q15042 981 aa15.82■□□□□ 0.12
SMG8-202ENST00000543872 MAP7D2Q96T17 732 aa15.81■□□□□ 0.12
SMG8-202ENST00000543872 C9orf84Q5VXU9 1444 aa15.81■□□□□ 0.12
SMG8-202ENST00000543872 NINLQ9Y2I6 1382 aa15.81■□□□□ 0.12
SMG8-202ENST00000543872 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
SMG8-202ENST00000543872 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SMG8-202ENST00000543872 IQGAP2Q13576 1575 aa15.8■□□□□ 0.12
SMG8-202ENST00000543872 ADGRL2O95490 1459 aa15.8■□□□□ 0.12
SMG8-202ENST00000543872 CAVIN1Q6NZI2 390 aaKnown RBP15.8■□□□□ 0.12
SMG8-202ENST00000543872 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
SMG8-202ENST00000543872 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
SMG8-202ENST00000543872 TROQ12816 1431 aaPredicted RBP15.79■□□□□ 0.12
SMG8-202ENST00000543872 GPRASP1Q5JY77 1395 aa15.79■□□□□ 0.12
SMG8-202ENST00000543872 LNPKQ9C0E8 428 aa15.79■□□□□ 0.12
SMG8-202ENST00000543872 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
SMG8-202ENST00000543872 CD2BP2O95400 341 aaKnown RBP15.79■□□□□ 0.12
SMG8-202ENST00000543872 MVPQ14764 893 aaKnown RBP15.79■□□□□ 0.12
SMG8-202ENST00000543872 ITPRIPQ8IWB1 547 aa15.79■□□□□ 0.12
SMG8-202ENST00000543872 DDIT3P35638 169 aa15.78■□□□□ 0.12
SMG8-202ENST00000543872 CDCA8Q53HL2 280 aa15.78■□□□□ 0.12
SMG8-202ENST00000543872 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
SMG8-202ENST00000543872 CIZ1Q9ULV3 898 aaPredicted RBP15.78■□□□□ 0.12
SMG8-202ENST00000543872 RTEL1-TNFRSF6BF6WH68 1400 aa15.78■□□□□ 0.12
SMG8-202ENST00000543872 KDM5DQ9BY66 1539 aa15.78■□□□□ 0.12
SMG8-202ENST00000543872 MCTP1Q6DN14 999 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms