RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
GNE-206ENST00000543356 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
GNE-206ENST00000543356 SLC52A1Q9NWF4 448 aa13.06□□□□□ -0.32
GNE-206ENST00000543356 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
GNE-206ENST00000543356 NEXMIFQ5QGS0 1516 aa13.05□□□□□ -0.32
GNE-206ENST00000543356 ARID4BQ4LE39 1312 aaPredicted RBP13.05□□□□□ -0.32
GNE-206ENST00000543356 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
GNE-206ENST00000543356 SETBP1Q9Y6X0 1596 aa13.04□□□□□ -0.32
GNE-206ENST00000543356 MYO5BQ9ULV0 1848 aa13.03□□□□□ -0.32
GNE-206ENST00000543356 C11orf95C9JLR9 678 aaPredicted RBP13.03□□□□□ -0.32
GNE-206ENST00000543356 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
GNE-206ENST00000543356 PIK3C2GO75747 1445 aa13.02□□□□□ -0.33
GNE-206ENST00000543356 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.33
GNE-206ENST00000543356 MLECQ14165 292 aa13.01□□□□□ -0.33
GNE-206ENST00000543356 ZFYVE9O95405 1425 aa13.01□□□□□ -0.33
GNE-206ENST00000543356 ADGRF5Q8IZF2 1346 aa13□□□□□ -0.33
GNE-206ENST00000543356 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
GNE-206ENST00000543356 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
GNE-206ENST00000543356 IDI1Q13907 227 aa13□□□□□ -0.33
GNE-206ENST00000543356 ZMYM3Q14202 1370 aa12.99□□□□□ -0.33
GNE-206ENST00000543356 KDM5AP29375 1690 aaKnown RBP12.99□□□□□ -0.33
GNE-206ENST00000543356 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
GNE-206ENST00000543356 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
GNE-206ENST00000543356 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
GNE-206ENST00000543356 MYO3AQ8NEV4 1616 aa12.98□□□□□ -0.33
GNE-206ENST00000543356 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
GNE-206ENST00000543356 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
GNE-206ENST00000543356 A2ML1A8K2U0 1454 aa12.96□□□□□ -0.34
GNE-206ENST00000543356 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
GNE-206ENST00000543356 ANP32CO43423 234 aa12.95□□□□□ -0.34
GNE-206ENST00000543356 C3P01024 1663 aa12.95□□□□□ -0.34
GNE-206ENST00000543356 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
GNE-206ENST00000543356 TESK2Q96S53 571 aa12.95□□□□□ -0.34
GNE-206ENST00000543356 C14orf93Q9H972 538 aaKnown RBP12.94□□□□□ -0.34
GNE-206ENST00000543356 TNRQ92752 1358 aa12.93□□□□□ -0.34
GNE-206ENST00000543356 UBR1Q8IWV7 1749 aa12.92□□□□□ -0.34
GNE-206ENST00000543356 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
GNE-206ENST00000543356 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
GNE-206ENST00000543356 NLRP1Q9C000 1473 aa12.91□□□□□ -0.34
GNE-206ENST00000543356 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
GNE-206ENST00000543356 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
GNE-206ENST00000543356 TMF1P82094 1093 aa12.9□□□□□ -0.34
GNE-206ENST00000543356 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
GNE-206ENST00000543356 ARHGEF28Q8N1W1 1705 aaKnown RBP12.9□□□□□ -0.34
GNE-206ENST00000543356 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
GNE-206ENST00000543356 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
GNE-206ENST00000543356 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
GNE-206ENST00000543356 SETD1AO15047 1707 aaKnown RBP12.89□□□□□ -0.35
GNE-206ENST00000543356 ALKQ9UM73 1620 aa12.88□□□□□ -0.35
GNE-206ENST00000543356 ADAMTSL3P82987 1691 aa12.87□□□□□ -0.35
GNE-206ENST00000543356 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
GNE-206ENST00000543356 MYOM1P52179 1685 aa12.87□□□□□ -0.35
GNE-206ENST00000543356 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
GNE-206ENST00000543356 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
GNE-206ENST00000543356 CDCA8Q53HL2 280 aa12.86□□□□□ -0.35
GNE-206ENST00000543356 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
GNE-206ENST00000543356 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.85□□□□□ -0.35
GNE-206ENST00000543356 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
GNE-206ENST00000543356 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
GNE-206ENST00000543356 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
GNE-206ENST00000543356 TMEM2Q9UHN6 1383 aa12.83□□□□□ -0.36
GNE-206ENST00000543356 PTPRMP28827 1452 aa12.83□□□□□ -0.36
GNE-206ENST00000543356 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
GNE-206ENST00000543356 TMEM132EQ6IEE7 984 aa12.82□□□□□ -0.36
GNE-206ENST00000543356 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
GNE-206ENST00000543356 SLIT1O75093 1534 aa12.82□□□□□ -0.36
GNE-206ENST00000543356 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
GNE-206ENST00000543356 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
GNE-206ENST00000543356 KTN1Q86UP2 1357 aaKnown RBP12.82□□□□□ -0.36
GNE-206ENST00000543356 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
GNE-206ENST00000543356 TRAK1Q9UPV9 953 aa12.81□□□□□ -0.36
GNE-206ENST00000543356 ARHGAP23Q9P227 1491 aa12.81□□□□□ -0.36
GNE-206ENST00000543356 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
GNE-206ENST00000543356 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
GNE-206ENST00000543356 ZNF142P52746 1687 aaPredicted RBP12.8□□□□□ -0.36
GNE-206ENST00000543356 CEP170BQ9Y4F5 1589 aaPredicted RBP12.79□□□□□ -0.36
GNE-206ENST00000543356 TULP4Q9NRJ4 1543 aa12.79□□□□□ -0.36
GNE-206ENST00000543356 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
GNE-206ENST00000543356 PER1O15534 1290 aaPredicted RBP12.77□□□□□ -0.36
GNE-206ENST00000543356 PLEKHG1Q9ULL1 1385 aa12.77□□□□□ -0.36
GNE-206ENST00000543356 PUS7Q96PZ0 661 aaKnown RBP12.76□□□□□ -0.37
GNE-206ENST00000543356 PANK3Q9H999 370 aa12.76□□□□□ -0.37
GNE-206ENST00000543356 CPS1P31327 1500 aa12.76□□□□□ -0.37
GNE-206ENST00000543356 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 DIP2AQ14689 1571 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 TECPR2O15040 1411 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 RALBP1Q15311 655 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 ADAMTS13Q76LX8 1427 aa12.75□□□□□ -0.37
GNE-206ENST00000543356 MED14O60244 1454 aa12.74□□□□□ -0.37
GNE-206ENST00000543356 EVC2Q86UK5 1308 aa12.74□□□□□ -0.37
GNE-206ENST00000543356 STK26Q9P289 416 aa12.73□□□□□ -0.37
GNE-206ENST00000543356 METP08581 1390 aa12.73□□□□□ -0.37
GNE-206ENST00000543356 THEMISQ8N1K5 641 aaPredicted RBP12.73□□□□□ -0.37
GNE-206ENST00000543356 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
GNE-206ENST00000543356 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
GNE-206ENST00000543356 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
GNE-206ENST00000543356 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
GNE-206ENST00000543356 FAM135BQ49AJ0 1406 aa12.72□□□□□ -0.37
GNE-206ENST00000543356 LTKP29376 864 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms