RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 MBD5Q9P267 1494 aa10.27□□□□□ -0.76
LRP6-206ENST00000543091 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
LRP6-206ENST00000543091 SAMD9LQ8IVG5 1584 aa10.26□□□□□ -0.77
LRP6-206ENST00000543091 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
LRP6-206ENST00000543091 ESCO1Q5FWF5 840 aa10.26□□□□□ -0.77
LRP6-206ENST00000543091 PANK3Q9H999 370 aa10.25□□□□□ -0.77
LRP6-206ENST00000543091 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
LRP6-206ENST00000543091 MIER1Q8N108 512 aa10.25□□□□□ -0.77
LRP6-206ENST00000543091 HECW2Q9P2P5 1572 aa10.24□□□□□ -0.77
LRP6-206ENST00000543091 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
LRP6-206ENST00000543091 ABCA9Q8IUA7 1624 aa10.24□□□□□ -0.77
LRP6-206ENST00000543091 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
LRP6-206ENST00000543091 NOS1P29475 1434 aa10.24□□□□□ -0.77
LRP6-206ENST00000543091 MEX3CQ5U5Q3 659 aaKnown RBP10.23□□□□□ -0.77
LRP6-206ENST00000543091 RIMS2Q9UQ26 1411 aa10.23□□□□□ -0.77
LRP6-206ENST00000543091 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
LRP6-206ENST00000543091 EVA1CP58658 441 aa10.22□□□□□ -0.77
LRP6-206ENST00000543091 RTF1Q92541 710 aaKnown RBP10.22□□□□□ -0.77
LRP6-206ENST00000543091 NEUROD2Q15784 382 aa10.22□□□□□ -0.77
LRP6-206ENST00000543091 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
LRP6-206ENST00000543091 ADGRF5Q8IZF2 1346 aa10.22□□□□□ -0.77
LRP6-206ENST00000543091 RPRD2Q5VT52 1461 aaKnown RBP10.22□□□□□ -0.77
LRP6-206ENST00000543091 U2AF1L5P0DN76 240 aaPredicted RBP10.22□□□□□ -0.77
LRP6-206ENST00000543091 U2AF1Q01081 240 aaKnown RBP eCLIP10.22□□□□□ -0.77
LRP6-206ENST00000543091 NBPF8Q3BBV2 869 aa10.22□□□□□ -0.77
LRP6-206ENST00000543091 CDK19Q9BWU1 502 aa10.22□□□□□ -0.77
LRP6-206ENST00000543091 HSPA2P54652 639 aa10.21□□□□□ -0.77
LRP6-206ENST00000543091 ATAD2Q6PL18 1390 aa10.21□□□□□ -0.77
LRP6-206ENST00000543091 C14orf93Q9H972 538 aaKnown RBP10.21□□□□□ -0.77
LRP6-206ENST00000543091 NLRP13Q86W25 1043 aa10.21□□□□□ -0.78
LRP6-206ENST00000543091 NLRP6P59044 892 aa10.2□□□□□ -0.78
LRP6-206ENST00000543091 ADGBQ8N7X0 1667 aa10.2□□□□□ -0.78
LRP6-206ENST00000543091 MAST1Q9Y2H9 1570 aa10.2□□□□□ -0.78
LRP6-206ENST00000543091 CCER2I3L3R5 266 aa10.19□□□□□ -0.78
LRP6-206ENST00000543091 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
LRP6-206ENST00000543091 LTV1Q96GA3 475 aaPredicted RBP10.19□□□□□ -0.78
LRP6-206ENST00000543091 CCDC61Q9Y6R9 512 aa10.19□□□□□ -0.78
LRP6-206ENST00000543091 GLI2P10070 1586 aa10.19□□□□□ -0.78
LRP6-206ENST00000543091 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
LRP6-206ENST00000543091 CALD1Q05682 793 aaKnown RBP10.18□□□□□ -0.78
LRP6-206ENST00000543091 LAS1LQ9Y4W2 734 aaKnown RBP10.18□□□□□ -0.78
LRP6-206ENST00000543091 CDC42BPAQ5VT25 1732 aa10.18□□□□□ -0.78
LRP6-206ENST00000543091 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
LRP6-206ENST00000543091 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
LRP6-206ENST00000543091 TBX22Q9Y458 520 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 MSH6P52701 1360 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 WAPLQ7Z5K2 1190 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 ARXQ96QS3 562 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 CHMP4AQ9BY43 222 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 CCDC7Q96M83 1385 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 TOM1O60784 492 aa10.17□□□□□ -0.78
LRP6-206ENST00000543091 NCKAP5LQ9HCH0 1330 aa10.16□□□□□ -0.78
LRP6-206ENST00000543091 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
LRP6-206ENST00000543091 KDM5DQ9BY66 1539 aa10.16□□□□□ -0.78
LRP6-206ENST00000543091 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
LRP6-206ENST00000543091 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
LRP6-206ENST00000543091 CABP1Q9NZU7 370 aa10.16□□□□□ -0.78
LRP6-206ENST00000543091 DIP2BQ9P265 1576 aa10.15□□□□□ -0.78
LRP6-206ENST00000543091 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
LRP6-206ENST00000543091 MYBBP1AQ9BQG0 1328 aaKnown RBP10.15□□□□□ -0.78
LRP6-206ENST00000543091 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.79
LRP6-206ENST00000543091 PZPP20742 1482 aa10.15□□□□□ -0.79
LRP6-206ENST00000543091 NPATQ14207 1427 aa10.14□□□□□ -0.79
LRP6-206ENST00000543091 SCAF11Q99590 1463 aaKnown RBP10.14□□□□□ -0.79
LRP6-206ENST00000543091 WASLO00401 505 aaPredicted RBP10.14□□□□□ -0.79
LRP6-206ENST00000543091 PHF8Q9UPP1 1060 aa10.14□□□□□ -0.79
LRP6-206ENST00000543091 GGNBP2Q9H3C7 697 aa10.13□□□□□ -0.79
LRP6-206ENST00000543091 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
LRP6-206ENST00000543091 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
LRP6-206ENST00000543091 NUTM2GQ5VZR2 741 aa10.13□□□□□ -0.79
LRP6-206ENST00000543091 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
LRP6-206ENST00000543091 PLXNC1O60486 1568 aa10.12□□□□□ -0.79
LRP6-206ENST00000543091 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
LRP6-206ENST00000543091 BCL11AQ9H165 835 aa10.12□□□□□ -0.79
LRP6-206ENST00000543091 WASHC2AQ641Q2 1341 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 C19orf44Q9H6X5 657 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 NLRP1Q9C000 1473 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 GCC2Q8IWJ2 1684 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 KCNA6P17658 529 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 C1orf141Q5JVX7 400 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 RAPGEF4Q8WZA2 1011 aa10.11□□□□□ -0.79
LRP6-206ENST00000543091 MYH16Q9H6N6 1097 aa10.1□□□□□ -0.79
LRP6-206ENST00000543091 NPHP1O15259 732 aa10.1□□□□□ -0.79
LRP6-206ENST00000543091 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
LRP6-206ENST00000543091 NLRP2Q9NX02 1062 aa10.1□□□□□ -0.79
LRP6-206ENST00000543091 DAXXQ9UER7 740 aaPredicted RBP10.1□□□□□ -0.79
LRP6-206ENST00000543091 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
LRP6-206ENST00000543091 PRDM11Q9NQV5 511 aa10.1□□□□□ -0.79
LRP6-206ENST00000543091 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
LRP6-206ENST00000543091 NUTM2BA6NNL0 878 aaPredicted RBP10.09□□□□□ -0.79
LRP6-206ENST00000543091 NUTM2EB1AL46 878 aaPredicted RBP10.09□□□□□ -0.79
LRP6-206ENST00000543091 NUTM2AQ8IVF1 878 aaPredicted RBP10.09□□□□□ -0.79
LRP6-206ENST00000543091 KCNH5Q8NCM2 988 aa10.09□□□□□ -0.79
LRP6-206ENST00000543091 PRKRIP1Q9H875 184 aaPredicted RBP10.09□□□□□ -0.79
LRP6-206ENST00000543091 FOXO3O43524 673 aa10.09□□□□□ -0.79
LRP6-206ENST00000543091 MS4A1P11836 297 aa10.09□□□□□ -0.79
LRP6-206ENST00000543091 CFAP65Q6ZU64 1925 aaKnown RBP10.08□□□□□ -0.8
LRP6-206ENST00000543091 ERVK-7P63135 1459 aa10.08□□□□□ -0.8
LRP6-206ENST00000543091 ARHGAP31Q2M1Z3 1444 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms