RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 PANK3Q9H999 370 aa12.48□□□□□ -0.41
TCF4-208ENST00000543082 PLXNC1O60486 1568 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 XRCC6P12956 609 aaKnown RBP eCLIP12.47□□□□□ -0.41
TCF4-208ENST00000543082 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 ABCC10Q5T3U5 1492 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 ABCC2Q92887 1545 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 UPF2Q9HAU5 1272 aaKnown RBP12.47□□□□□ -0.41
TCF4-208ENST00000543082 CGNL1Q0VF96 1302 aa12.47□□□□□ -0.41
TCF4-208ENST00000543082 ZMYND15Q9H091 742 aa12.46□□□□□ -0.41
TCF4-208ENST00000543082 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
TCF4-208ENST00000543082 ARHGEF5Q12774 1597 aa12.46□□□□□ -0.41
TCF4-208ENST00000543082 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.41
TCF4-208ENST00000543082 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
TCF4-208ENST00000543082 TESK2Q96S53 571 aa12.45□□□□□ -0.42
TCF4-208ENST00000543082 TMF1P82094 1093 aa12.45□□□□□ -0.42
TCF4-208ENST00000543082 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
TCF4-208ENST00000543082 ZNF777Q9ULD5 760 aaPredicted RBP12.44□□□□□ -0.42
TCF4-208ENST00000543082 NUP160Q12769 1436 aa12.44□□□□□ -0.42
TCF4-208ENST00000543082 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
TCF4-208ENST00000543082 SEC24BO95487 1268 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
TCF4-208ENST00000543082 A2MP01023 1474 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 SYNMO15061 1565 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 IGHDP01880 384 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 PPP2R1AP30153 589 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 MCM4P33991 863 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 MRE11P49959 708 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 CCDC141Q6ZP82 1450 aa12.43□□□□□ -0.42
TCF4-208ENST00000543082 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
TCF4-208ENST00000543082 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
TCF4-208ENST00000543082 GRIN2AQ12879 1464 aa12.42□□□□□ -0.42
TCF4-208ENST00000543082 NBPF1Q3BBV0 1214 aa12.41□□□□□ -0.42
TCF4-208ENST00000543082 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
TCF4-208ENST00000543082 TBC1D2Q9BYX2 928 aa12.41□□□□□ -0.42
TCF4-208ENST00000543082 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
TCF4-208ENST00000543082 PANK2Q9BZ23 570 aa12.41□□□□□ -0.42
TCF4-208ENST00000543082 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 E9PSI1 815 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 SYNJ2O15056 1496 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 UNC13BO14795 1591 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
TCF4-208ENST00000543082 AAMPQ13685 434 aa12.4□□□□□ -0.43
TCF4-208ENST00000543082 ARXQ96QS3 562 aa12.4□□□□□ -0.43
TCF4-208ENST00000543082 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 IQGAP1P46940 1657 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 BCAR3O75815 825 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
TCF4-208ENST00000543082 TSPY4P0CV99 314 aa12.38□□□□□ -0.43
TCF4-208ENST00000543082 TSPY10P0CW01 314 aa12.38□□□□□ -0.43
TCF4-208ENST00000543082 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
TCF4-208ENST00000543082 CHMP5Q9NZZ3 219 aa12.38□□□□□ -0.43
TCF4-208ENST00000543082 ABCA8O94911 1581 aa12.38□□□□□ -0.43
TCF4-208ENST00000543082 ESPNB1AK53 854 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 TRAK2O60296 914 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 TPM2P07951 284 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 MYOM1P52179 1685 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
TCF4-208ENST00000543082 MAGI1Q96QZ7 1491 aaPredicted RBP12.37□□□□□ -0.43
TCF4-208ENST00000543082 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
TCF4-208ENST00000543082 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
TCF4-208ENST00000543082 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
TCF4-208ENST00000543082 CANXP27824 592 aaKnown RBP12.36□□□□□ -0.43
TCF4-208ENST00000543082 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
TCF4-208ENST00000543082 PLA2R1Q13018 1463 aa12.35□□□□□ -0.43
TCF4-208ENST00000543082 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
TCF4-208ENST00000543082 ATP10AO60312 1499 aa12.35□□□□□ -0.43
TCF4-208ENST00000543082 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
TCF4-208ENST00000543082 MAST1Q9Y2H9 1570 aa12.34□□□□□ -0.43
TCF4-208ENST00000543082 TRIM44Q96DX7 344 aaPredicted RBP12.34□□□□□ -0.43
TCF4-208ENST00000543082 COG6Q9Y2V7 657 aa12.34□□□□□ -0.43
TCF4-208ENST00000543082 CARMIL2Q6F5E8 1435 aa12.33□□□□□ -0.43
TCF4-208ENST00000543082 APAF1O14727 1248 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 CCDC146Q8IYE0 955 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 RTEL1-TNFRSF6BF6WH68 1400 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 PLEKHD1A6NEE1 506 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
TCF4-208ENST00000543082 PREX2Q70Z35 1606 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
TCF4-208ENST00000543082 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
TCF4-208ENST00000543082 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 MADDQ8WXG6 1647 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 SAMD9LQ8IVG5 1584 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 SCAPERQ9BY12 1400 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 ERBB4Q15303 1308 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 PDCL3Q9H2J4 239 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
TCF4-208ENST00000543082 ATP10BO94823 1461 aa12.31□□□□□ -0.44
TCF4-208ENST00000543082 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms