RNA–Protein interactions for RNA: ENST00000542898.5

MEFV-210, Transcript of MEFV, pyrin innate immunity regulator, humanhuman

TSL 5

Gene MEFV, Length 3,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEFV-210ENST00000542898 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
MEFV-210ENST00000542898 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
MEFV-210ENST00000542898 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
MEFV-210ENST00000542898 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
MEFV-210ENST00000542898 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
MEFV-210ENST00000542898 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
MEFV-210ENST00000542898 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
MEFV-210ENST00000542898 MAP3K1Q13233 1512 aa16.86■□□□□ 0.29
MEFV-210ENST00000542898 PPRC1Q5VV67 1664 aaKnown RBP16.86■□□□□ 0.29
MEFV-210ENST00000542898 IGHDP01880 384 aa16.85■□□□□ 0.29
MEFV-210ENST00000542898 NBPF1Q3BBV0 1214 aa16.85■□□□□ 0.29
MEFV-210ENST00000542898 MCM4P33991 863 aa16.85■□□□□ 0.29
MEFV-210ENST00000542898 TSPOAP1O95153 1857 aa16.85■□□□□ 0.29
MEFV-210ENST00000542898 GRPEL1Q9HAV7 217 aa16.84■□□□□ 0.29
MEFV-210ENST00000542898 NUP155O75694 1391 aa16.83■□□□□ 0.29
MEFV-210ENST00000542898 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.29
MEFV-210ENST00000542898 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.29
MEFV-210ENST00000542898 MAP3K4Q9Y6R4 1608 aa16.83■□□□□ 0.29
MEFV-210ENST00000542898 TBC1D2Q9BYX2 928 aa16.83■□□□□ 0.28
MEFV-210ENST00000542898 FOXD4L6Q3SYB3 417 aaPredicted RBP16.83■□□□□ 0.28
MEFV-210ENST00000542898 FOXD4L3Q6VB84 417 aaPredicted RBP16.83■□□□□ 0.28
MEFV-210ENST00000542898 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
MEFV-210ENST00000542898 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
MEFV-210ENST00000542898 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
MEFV-210ENST00000542898 MYOM3Q5VTT5 1437 aa16.82■□□□□ 0.28
MEFV-210ENST00000542898 CDC42BPAQ5VT25 1732 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 MRE11P49959 708 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 MLECQ14165 292 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 ZHX1Q9UKY1 873 aaPredicted RBP16.81■□□□□ 0.28
MEFV-210ENST00000542898 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
MEFV-210ENST00000542898 CDC42BPBQ9Y5S2 1711 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 TMF1P82094 1093 aa16.81■□□□□ 0.28
MEFV-210ENST00000542898 DDX49Q9Y6V7 483 aaKnown RBP16.8■□□□□ 0.28
MEFV-210ENST00000542898 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
MEFV-210ENST00000542898 CHMP5Q9NZZ3 219 aa16.8■□□□□ 0.28
MEFV-210ENST00000542898 GLI2P10070 1586 aa16.79■□□□□ 0.28
MEFV-210ENST00000542898 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
MEFV-210ENST00000542898 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
MEFV-210ENST00000542898 APBB1O00213 710 aa16.78■□□□□ 0.28
MEFV-210ENST00000542898 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
MEFV-210ENST00000542898 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
MEFV-210ENST00000542898 SUPT6HQ7KZ85 1726 aaKnown RBP16.77■□□□□ 0.27
MEFV-210ENST00000542898 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.27
MEFV-210ENST00000542898 GBP4Q96PP9 640 aa16.77■□□□□ 0.27
MEFV-210ENST00000542898 MAPK8IP2Q13387 824 aaPredicted RBP16.76■□□□□ 0.27
MEFV-210ENST00000542898 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
MEFV-210ENST00000542898 CLCN1P35523 988 aa16.76■□□□□ 0.27
MEFV-210ENST00000542898 MAPK8IP3Q9UPT6 1336 aa16.74■□□□□ 0.27
MEFV-210ENST00000542898 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
MEFV-210ENST00000542898 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
MEFV-210ENST00000542898 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
MEFV-210ENST00000542898 MYO5CQ9NQX4 1742 aa16.73■□□□□ 0.27
MEFV-210ENST00000542898 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
MEFV-210ENST00000542898 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
MEFV-210ENST00000542898 NOL8Q76FK4 1167 aaKnown RBP16.73■□□□□ 0.27
MEFV-210ENST00000542898 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
MEFV-210ENST00000542898 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
MEFV-210ENST00000542898 GGT6Q6P531 493 aa16.72■□□□□ 0.27
MEFV-210ENST00000542898 DUSP27Q5VZP5 1158 aa16.72■□□□□ 0.27
MEFV-210ENST00000542898 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
MEFV-210ENST00000542898 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
MEFV-210ENST00000542898 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
MEFV-210ENST00000542898 PTPN23Q9H3S7 1636 aa16.71■□□□□ 0.27
MEFV-210ENST00000542898 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
MEFV-210ENST00000542898 PLCH2O75038 1416 aa16.7■□□□□ 0.26
MEFV-210ENST00000542898 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
MEFV-210ENST00000542898 ARHGEF12Q9NZN5 1544 aa16.7■□□□□ 0.26
MEFV-210ENST00000542898 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
MEFV-210ENST00000542898 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
MEFV-210ENST00000542898 SAMD9LQ8IVG5 1584 aa16.69■□□□□ 0.26
MEFV-210ENST00000542898 CALD1Q05682 793 aaKnown RBP16.68■□□□□ 0.26
MEFV-210ENST00000542898 CGNL1Q0VF96 1302 aa16.68■□□□□ 0.26
MEFV-210ENST00000542898 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
MEFV-210ENST00000542898 STAG3Q9UJ98 1225 aa16.68■□□□□ 0.26
MEFV-210ENST00000542898 MCTP1Q6DN14 999 aa16.67■□□□□ 0.26
MEFV-210ENST00000542898 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
MEFV-210ENST00000542898 NUTM2DQ5VT03 806 aaPredicted RBP16.67■□□□□ 0.26
MEFV-210ENST00000542898 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
MEFV-210ENST00000542898 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
MEFV-210ENST00000542898 FANCAO15360 1455 aa16.65■□□□□ 0.26
MEFV-210ENST00000542898 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
MEFV-210ENST00000542898 UQCRHLA0A096LP55 91 aa16.65■□□□□ 0.26
MEFV-210ENST00000542898 UQCRHP07919 91 aa16.65■□□□□ 0.26
MEFV-210ENST00000542898 TPM2P07951 284 aa16.64■□□□□ 0.25
MEFV-210ENST00000542898 ERBB4Q15303 1308 aa16.64■□□□□ 0.25
MEFV-210ENST00000542898 E9PSI1 815 aa16.63■□□□□ 0.25
MEFV-210ENST00000542898 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
MEFV-210ENST00000542898 ESF1Q9H501 851 aaKnown RBP16.63■□□□□ 0.25
MEFV-210ENST00000542898 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
MEFV-210ENST00000542898 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
MEFV-210ENST00000542898 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
MEFV-210ENST00000542898 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
MEFV-210ENST00000542898 ITSN2Q9NZM3 1697 aa16.62■□□□□ 0.25
MEFV-210ENST00000542898 IGSF3O75054 1194 aa16.62■□□□□ 0.25
MEFV-210ENST00000542898 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
MEFV-210ENST00000542898 PCDHB15Q9Y5E8 787 aa16.62■□□□□ 0.25
MEFV-210ENST00000542898 TNPO1Q92973 898 aaKnown RBP16.61■□□□□ 0.25
MEFV-210ENST00000542898 FRMPD1Q5SYB0 1578 aa16.61■□□□□ 0.25
MEFV-210ENST00000542898 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms