RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 FOXD4L3Q6VB84 417 aaPredicted RBP16.04■□□□□ 0.16
TNC-212ENST00000542877 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
TNC-212ENST00000542877 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
TNC-212ENST00000542877 KIF7Q2M1P5 1343 aa16.03■□□□□ 0.16
TNC-212ENST00000542877 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
TNC-212ENST00000542877 VSIG10Q8N0Z9 540 aa16.02■□□□□ 0.16
TNC-212ENST00000542877 CEP89Q96ST8 783 aa16.02■□□□□ 0.15
TNC-212ENST00000542877 RIPK4P57078 832 aa16.02■□□□□ 0.15
TNC-212ENST00000542877 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.15
TNC-212ENST00000542877 STAC3Q96MF2 364 aa16.01■□□□□ 0.15
TNC-212ENST00000542877 AKAP17AQ02040 695 aaKnown RBP16.01■□□□□ 0.15
TNC-212ENST00000542877 MYOM3Q5VTT5 1437 aa16.01■□□□□ 0.15
TNC-212ENST00000542877 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
TNC-212ENST00000542877 MCTP1Q6DN14 999 aa16.01■□□□□ 0.15
TNC-212ENST00000542877 PES1O00541 588 aaKnown RBP16■□□□□ 0.15
TNC-212ENST00000542877 C22orf23Q9BZE7 217 aa16■□□□□ 0.15
TNC-212ENST00000542877 MARCH6O60337 910 aa16■□□□□ 0.15
TNC-212ENST00000542877 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
TNC-212ENST00000542877 TEFQ10587 303 aa16■□□□□ 0.15
TNC-212ENST00000542877 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
TNC-212ENST00000542877 FRAT2O75474 233 aaPredicted RBP16■□□□□ 0.15
TNC-212ENST00000542877 TPM2P07951 284 aa16■□□□□ 0.15
TNC-212ENST00000542877 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 FAM43AQ8N2R8 423 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 RNF20Q5VTR2 975 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 CCDC70Q6NSX1 233 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 CCAR2Q8N163 923 aaKnown RBP15.99■□□□□ 0.15
TNC-212ENST00000542877 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
TNC-212ENST00000542877 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
TNC-212ENST00000542877 NCBP3Q53F19 620 aaKnown RBP15.98■□□□□ 0.15
TNC-212ENST00000542877 BRD4O60885 1362 aaPredicted RBP15.98■□□□□ 0.15
TNC-212ENST00000542877 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
TNC-212ENST00000542877 SETQ01105 290 aaPredicted RBP15.98■□□□□ 0.15
TNC-212ENST00000542877 FGD6Q6ZV73 1430 aa15.98■□□□□ 0.15
TNC-212ENST00000542877 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
TNC-212ENST00000542877 ZNF592Q92610 1267 aa15.97■□□□□ 0.15
TNC-212ENST00000542877 GNAI1P63096 354 aa15.97■□□□□ 0.15
TNC-212ENST00000542877 CUX1P39880 1505 aa15.97■□□□□ 0.15
TNC-212ENST00000542877 TRIM29Q14134 588 aa15.97■□□□□ 0.15
TNC-212ENST00000542877 MRE11P49959 708 aa15.96■□□□□ 0.15
TNC-212ENST00000542877 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
TNC-212ENST00000542877 MINK1Q8N4C8 1332 aaPredicted RBP15.96■□□□□ 0.15
TNC-212ENST00000542877 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
TNC-212ENST00000542877 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.14
TNC-212ENST00000542877 SMC3Q9UQE7 1217 aa15.96■□□□□ 0.14
TNC-212ENST00000542877 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
TNC-212ENST00000542877 FAM13BQ9NYF5 915 aa15.95■□□□□ 0.14
TNC-212ENST00000542877 CCDC9Q9Y3X0 531 aaKnown RBP15.95■□□□□ 0.14
TNC-212ENST00000542877 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 HOOK1Q9UJC3 728 aaKnown RBP15.94■□□□□ 0.14
TNC-212ENST00000542877 CPLX1O14810 134 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 ANKRD20A12PQ8NF67 263 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 G3V3G9 751 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 IPO7O95373 1038 aaKnown RBP15.94■□□□□ 0.14
TNC-212ENST00000542877 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
TNC-212ENST00000542877 PTPRGP23470 1445 aa15.93■□□□□ 0.14
TNC-212ENST00000542877 CDC45O75419 566 aa15.93■□□□□ 0.14
TNC-212ENST00000542877 EIF2S2P20042 333 aaKnown RBP15.93■□□□□ 0.14
TNC-212ENST00000542877 DDX58O95786 925 aaKnown RBP15.93■□□□□ 0.14
TNC-212ENST00000542877 TEX35Q5T0J7 233 aa15.93■□□□□ 0.14
TNC-212ENST00000542877 SASS6Q6UVJ0 657 aa15.93■□□□□ 0.14
TNC-212ENST00000542877 FKBP5Q13451 457 aaPredicted RBP15.93■□□□□ 0.14
TNC-212ENST00000542877 G3BP1Q13283 466 aaKnown RBP eCLIP15.92■□□□□ 0.14
TNC-212ENST00000542877 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
TNC-212ENST00000542877 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
TNC-212ENST00000542877 HOMER1Q86YM7 354 aa15.92■□□□□ 0.14
TNC-212ENST00000542877 ERC2O15083 957 aa15.92■□□□□ 0.14
TNC-212ENST00000542877 PDE4CQ08493 712 aa15.91■□□□□ 0.14
TNC-212ENST00000542877 CCDC47Q96A33 483 aaKnown RBP15.91■□□□□ 0.14
TNC-212ENST00000542877 PANK1Q8TE04 598 aa15.91■□□□□ 0.14
TNC-212ENST00000542877 VPS53Q5VIR6 699 aa15.91■□□□□ 0.14
TNC-212ENST00000542877 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
TNC-212ENST00000542877 TRDNQ13061 729 aa15.9■□□□□ 0.14
TNC-212ENST00000542877 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
TNC-212ENST00000542877 CCDC73Q6ZRK6 1079 aa15.89■□□□□ 0.13
TNC-212ENST00000542877 NASPP49321 788 aaPredicted RBP15.89■□□□□ 0.13
TNC-212ENST00000542877 FANCD2Q9BXW9 1451 aa15.89■□□□□ 0.13
TNC-212ENST00000542877 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
TNC-212ENST00000542877 IGF1RP08069 1367 aa15.88■□□□□ 0.13
TNC-212ENST00000542877 KIF21BO75037 1637 aa15.88■□□□□ 0.13
TNC-212ENST00000542877 MTERF4Q7Z6M4 381 aaKnown RBP15.88■□□□□ 0.13
TNC-212ENST00000542877 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
TNC-212ENST00000542877 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
TNC-212ENST00000542877 AMOTL1Q8IY63 956 aa15.87■□□□□ 0.13
TNC-212ENST00000542877 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.87■□□□□ 0.13
TNC-212ENST00000542877 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
TNC-212ENST00000542877 TRAK2O60296 914 aa15.87■□□□□ 0.13
TNC-212ENST00000542877 PCMTD1Q96MG8 357 aaPredicted RBP15.87■□□□□ 0.13
TNC-212ENST00000542877 TSPYL4Q9UJ04 414 aa15.87■□□□□ 0.13
TNC-212ENST00000542877 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
TNC-212ENST00000542877 APPP05067 770 aa15.86■□□□□ 0.13
TNC-212ENST00000542877 NECTIN2Q92692 538 aa15.86■□□□□ 0.13
TNC-212ENST00000542877 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.86■□□□□ 0.13
TNC-212ENST00000542877 LETM1O95202 739 aaPredicted RBP15.85■□□□□ 0.13
TNC-212ENST00000542877 MBD3O95983 291 aa15.85■□□□□ 0.13
TNC-212ENST00000542877 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
TNC-212ENST00000542877 MNS1Q8NEH6 495 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms