RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 MED1Q15648 1581 aaPredicted RBP9.41□□□□□ -0.9
VEGFB-203ENST00000541681 LRRC7Q96NW7 1537 aa9.41□□□□□ -0.9
VEGFB-203ENST00000541681 ARHGAP23Q9P227 1491 aa9.41□□□□□ -0.9
VEGFB-203ENST00000541681 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
VEGFB-203ENST00000541681 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
VEGFB-203ENST00000541681 MPHOSPH9Q99550 1183 aa9.41□□□□□ -0.9
VEGFB-203ENST00000541681 ANKRD50Q9ULJ7 1429 aa9.4□□□□□ -0.9
VEGFB-203ENST00000541681 TET3O43151 1660 aa9.4□□□□□ -0.9
VEGFB-203ENST00000541681 LTKP29376 864 aa9.4□□□□□ -0.9
VEGFB-203ENST00000541681 BCANQ96GW7 911 aa9.4□□□□□ -0.9
VEGFB-203ENST00000541681 ALKQ9UM73 1620 aa9.4□□□□□ -0.9
VEGFB-203ENST00000541681 MYO5BQ9ULV0 1848 aa9.4□□□□□ -0.91
VEGFB-203ENST00000541681 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
VEGFB-203ENST00000541681 KDM5AP29375 1690 aaKnown RBP9.39□□□□□ -0.91
VEGFB-203ENST00000541681 UNC13BO14795 1591 aa9.39□□□□□ -0.91
VEGFB-203ENST00000541681 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
VEGFB-203ENST00000541681 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
VEGFB-203ENST00000541681 CHGAP10645 457 aaKnown RBP9.37□□□□□ -0.91
VEGFB-203ENST00000541681 IDI1Q13907 227 aa9.37□□□□□ -0.91
VEGFB-203ENST00000541681 NOS1P29475 1434 aa9.37□□□□□ -0.91
VEGFB-203ENST00000541681 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
VEGFB-203ENST00000541681 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
VEGFB-203ENST00000541681 SLC26A8Q96RN1 970 aa9.36□□□□□ -0.91
VEGFB-203ENST00000541681 E9PCH4 1651 aa9.36□□□□□ -0.91
VEGFB-203ENST00000541681 SOCS7O14512 581 aa9.35□□□□□ -0.91
VEGFB-203ENST00000541681 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
VEGFB-203ENST00000541681 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
VEGFB-203ENST00000541681 IQGAP3Q86VI3 1631 aa9.34□□□□□ -0.91
VEGFB-203ENST00000541681 TMEM131LA2VDJ0 1609 aa9.34□□□□□ -0.91
VEGFB-203ENST00000541681 NWD1Q149M9 1564 aa9.33□□□□□ -0.92
VEGFB-203ENST00000541681 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
VEGFB-203ENST00000541681 TMEM94Q12767 1356 aa9.33□□□□□ -0.92
VEGFB-203ENST00000541681 NUTM2DQ5VT03 806 aaPredicted RBP9.32□□□□□ -0.92
VEGFB-203ENST00000541681 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
VEGFB-203ENST00000541681 SLC52A1Q9NWF4 448 aa9.32□□□□□ -0.92
VEGFB-203ENST00000541681 NKTRP30414 1462 aaKnown RBP9.32□□□□□ -0.92
VEGFB-203ENST00000541681 ROBO1Q9Y6N7 1651 aa9.32□□□□□ -0.92
VEGFB-203ENST00000541681 NUP155O75694 1391 aa9.31□□□□□ -0.92
VEGFB-203ENST00000541681 SPHKAPQ2M3C7 1700 aa9.31□□□□□ -0.92
VEGFB-203ENST00000541681 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
VEGFB-203ENST00000541681 PLEKHG1Q9ULL1 1385 aa9.3□□□□□ -0.92
VEGFB-203ENST00000541681 KCNA6P17658 529 aa9.3□□□□□ -0.92
VEGFB-203ENST00000541681 C14orf37Q86TY3 774 aa9.3□□□□□ -0.92
VEGFB-203ENST00000541681 MSH6P52701 1360 aa9.29□□□□□ -0.92
VEGFB-203ENST00000541681 CHD2O14647 1828 aaKnown RBP9.28□□□□□ -0.92
VEGFB-203ENST00000541681 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
VEGFB-203ENST00000541681 FOXD1Q16676 465 aa9.28□□□□□ -0.92
VEGFB-203ENST00000541681 DIP2AQ14689 1571 aa9.28□□□□□ -0.92
VEGFB-203ENST00000541681 HDGFP51858 240 aaKnown RBP9.27□□□□□ -0.93
VEGFB-203ENST00000541681 L3MBTL2Q969R5 705 aa9.27□□□□□ -0.93
VEGFB-203ENST00000541681 TRPM2O94759 1503 aa9.26□□□□□ -0.93
VEGFB-203ENST00000541681 ZNF326Q5BKZ1 582 aaKnown RBP9.26□□□□□ -0.93
VEGFB-203ENST00000541681 MIER1Q8N108 512 aa9.26□□□□□ -0.93
VEGFB-203ENST00000541681 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
VEGFB-203ENST00000541681 CLTCL1P53675 1640 aa9.26□□□□□ -0.93
VEGFB-203ENST00000541681 FAM135BQ49AJ0 1406 aa9.25□□□□□ -0.93
VEGFB-203ENST00000541681 KIF1BO60333 1816 aa9.24□□□□□ -0.93
VEGFB-203ENST00000541681 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
VEGFB-203ENST00000541681 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
VEGFB-203ENST00000541681 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.23□□□□□ -0.93
VEGFB-203ENST00000541681 TBX22Q9Y458 520 aa9.22□□□□□ -0.93
VEGFB-203ENST00000541681 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
VEGFB-203ENST00000541681 SETBP1Q9Y6X0 1596 aa9.21□□□□□ -0.93
VEGFB-203ENST00000541681 TRPM1Q7Z4N2 1603 aa9.21□□□□□ -0.93
VEGFB-203ENST00000541681 ATF3P18847 181 aa9.21□□□□□ -0.94
VEGFB-203ENST00000541681 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
VEGFB-203ENST00000541681 SLAIN2Q9P270 581 aa9.21□□□□□ -0.94
VEGFB-203ENST00000541681 PTPRUQ92729 1446 aa9.21□□□□□ -0.94
VEGFB-203ENST00000541681 NEXMIFQ5QGS0 1516 aa9.21□□□□□ -0.94
VEGFB-203ENST00000541681 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
VEGFB-203ENST00000541681 NBPF8Q3BBV2 869 aa9.2□□□□□ -0.94
VEGFB-203ENST00000541681 AMOTL2Q9Y2J4 779 aa9.2□□□□□ -0.94
VEGFB-203ENST00000541681 LAMC1P11047 1609 aa9.2□□□□□ -0.94
VEGFB-203ENST00000541681 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
VEGFB-203ENST00000541681 CENPBP07199 599 aaPredicted RBP9.19□□□□□ -0.94
VEGFB-203ENST00000541681 HSPA5P11021 654 aaKnown RBP9.19□□□□□ -0.94
VEGFB-203ENST00000541681 MEX3CQ5U5Q3 659 aaKnown RBP9.19□□□□□ -0.94
VEGFB-203ENST00000541681 PIK3R4Q99570 1358 aa9.19□□□□□ -0.94
VEGFB-203ENST00000541681 JCADQ9P266 1359 aa9.19□□□□□ -0.94
VEGFB-203ENST00000541681 CCDC144AA2RUR9 1427 aa9.19□□□□□ -0.94
VEGFB-203ENST00000541681 NALCNQ8IZF0 1738 aa9.19□□□□□ -0.94
VEGFB-203ENST00000541681 METP08581 1390 aa9.18□□□□□ -0.94
VEGFB-203ENST00000541681 DDX10Q13206 875 aaKnown RBP9.18□□□□□ -0.94
VEGFB-203ENST00000541681 AHDC1Q5TGY3 1603 aaPredicted RBP9.18□□□□□ -0.94
VEGFB-203ENST00000541681 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
VEGFB-203ENST00000541681 CADPS2Q86UW7 1296 aa9.18□□□□□ -0.94
VEGFB-203ENST00000541681 RALGAPBQ86X10 1494 aa9.18□□□□□ -0.94
VEGFB-203ENST00000541681 ASXL1Q8IXJ9 1541 aa9.17□□□□□ -0.94
VEGFB-203ENST00000541681 NCOA3Q9Y6Q9 1424 aa9.17□□□□□ -0.94
VEGFB-203ENST00000541681 RGS17Q9UGC6 210 aaPredicted RBP9.17□□□□□ -0.94
VEGFB-203ENST00000541681 IFT172Q9UG01 1749 aa9.17□□□□□ -0.94
VEGFB-203ENST00000541681 KIAA1210Q9ULL0 1709 aa9.17□□□□□ -0.94
VEGFB-203ENST00000541681 SHPRHQ149N8 1683 aa9.16□□□□□ -0.94
VEGFB-203ENST00000541681 LRP6O75581 1613 aa9.16□□□□□ -0.94
VEGFB-203ENST00000541681 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
VEGFB-203ENST00000541681 C19orf44Q9H6X5 657 aa9.16□□□□□ -0.94
VEGFB-203ENST00000541681 PPLO60437 1756 aa9.15□□□□□ -0.94
VEGFB-203ENST00000541681 NUTM2BA6NNL0 878 aaPredicted RBP9.15□□□□□ -0.94
VEGFB-203ENST00000541681 NUTM2EB1AL46 878 aaPredicted RBP9.15□□□□□ -0.94
VEGFB-203ENST00000541681 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms