RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-214ENST00000541600 CABP2Q9NPB3 220 aa9.58□□□□□ -0.88
EPHA4-214ENST00000541600 FARP1Q9Y4F1 1045 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-214ENST00000541600 ZNF335Q9H4Z2 1342 aaPredicted RBP9.57□□□□□ -0.88
EPHA4-214ENST00000541600 NAIPQ13075 1403 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 CAMK2BQ13554 666 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 CHADLQ6NUI6 762 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 CRISPLD2Q9H0B8 497 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 PODXL2Q9NZ53 605 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 TTC37Q6PGP7 1564 aa9.57□□□□□ -0.88
EPHA4-214ENST00000541600 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
EPHA4-214ENST00000541600 IFNL1Q8IU54 200 aa9.56□□□□□ -0.88
EPHA4-214ENST00000541600 ITGAEP38570 1179 aa9.55□□□□□ -0.88
EPHA4-214ENST00000541600 IL27Q8NEV9 243 aa9.55□□□□□ -0.88
EPHA4-214ENST00000541600 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
EPHA4-214ENST00000541600 ARHGEF40Q8TER5 1519 aa9.55□□□□□ -0.88
EPHA4-214ENST00000541600 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
EPHA4-214ENST00000541600 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
EPHA4-214ENST00000541600 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
EPHA4-214ENST00000541600 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
EPHA4-214ENST00000541600 ABCA8O94911 1581 aa9.54□□□□□ -0.88
EPHA4-214ENST00000541600 ROCK1Q13464 1354 aa9.53□□□□□ -0.88
EPHA4-214ENST00000541600 RBM26Q5T8P6 1007 aaKnown RBP9.53□□□□□ -0.88
EPHA4-214ENST00000541600 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
EPHA4-214ENST00000541600 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
EPHA4-214ENST00000541600 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
EPHA4-214ENST00000541600 ATP1B4Q9UN42 357 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-214ENST00000541600 ARHGEF12Q9NZN5 1544 aa9.52□□□□□ -0.88
EPHA4-214ENST00000541600 KIAA0556O60303 1618 aa9.52□□□□□ -0.89
EPHA4-214ENST00000541600 ABCA9Q8IUA7 1624 aa9.51□□□□□ -0.89
EPHA4-214ENST00000541600 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
EPHA4-214ENST00000541600 NEO1Q92859 1461 aa9.51□□□□□ -0.89
EPHA4-214ENST00000541600 NCOA1Q15788 1441 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
EPHA4-214ENST00000541600 PIP4K2BP78356 416 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 POTEAQ6S8J7 498 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 MS4A4AQ96JQ5 239 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 SIN3AQ96ST3 1273 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 ATP10BO94823 1461 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 RICTORQ6R327 1708 aa9.5□□□□□ -0.89
EPHA4-214ENST00000541600 TRIM66O15016 1216 aa9.49□□□□□ -0.89
EPHA4-214ENST00000541600 FER1L4A9Z1Z3 1794 aa9.49□□□□□ -0.89
EPHA4-214ENST00000541600 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
EPHA4-214ENST00000541600 MAP3K13O43283 966 aa9.48□□□□□ -0.89
EPHA4-214ENST00000541600 PDE4DQ08499 809 aa9.48□□□□□ -0.89
EPHA4-214ENST00000541600 RAPGEF6Q8TEU7 1601 aa9.48□□□□□ -0.89
EPHA4-214ENST00000541600 UHRF1BP1Q6BDS2 1440 aa9.48□□□□□ -0.89
EPHA4-214ENST00000541600 KIF12Q96FN5 646 aa9.47□□□□□ -0.89
EPHA4-214ENST00000541600 CDK11AQ9UQ88 783 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-214ENST00000541600 FANCAO15360 1455 aa9.47□□□□□ -0.89
EPHA4-214ENST00000541600 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
EPHA4-214ENST00000541600 DNMT1P26358 1616 aaKnown RBP9.46□□□□□ -0.89
EPHA4-214ENST00000541600 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
EPHA4-214ENST00000541600 DENND4BO75064 1496 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-214ENST00000541600 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
EPHA4-214ENST00000541600 TROQ12816 1431 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-214ENST00000541600 CDK13Q14004 1512 aaKnown RBP9.45□□□□□ -0.9
EPHA4-214ENST00000541600 ZMYM4Q5VZL5 1548 aa9.43□□□□□ -0.9
EPHA4-214ENST00000541600 ABCC5O15440 1437 aa9.43□□□□□ -0.9
EPHA4-214ENST00000541600 DAPK1P53355 1430 aa9.43□□□□□ -0.9
EPHA4-214ENST00000541600 PAK3O75914 559 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-214ENST00000541600 ZFYVE16Q7Z3T8 1539 aa9.42□□□□□ -0.9
EPHA4-214ENST00000541600 ADGRL2O95490 1459 aa9.42□□□□□ -0.9
EPHA4-214ENST00000541600 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
EPHA4-214ENST00000541600 YTHDC1Q96MU7 727 aaKnown RBP9.41□□□□□ -0.9
EPHA4-214ENST00000541600 CAMSAP1Q5T5Y3 1602 aa9.41□□□□□ -0.9
EPHA4-214ENST00000541600 ANKRD30BQ9BXX2 1392 aa9.4□□□□□ -0.9
EPHA4-214ENST00000541600 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
EPHA4-214ENST00000541600 MKRN3Q13064 507 aaKnown RBP9.4□□□□□ -0.9
EPHA4-214ENST00000541600 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
EPHA4-214ENST00000541600 SETD1BQ9UPS6 1966 aaKnown RBP9.4□□□□□ -0.9
EPHA4-214ENST00000541600 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
EPHA4-214ENST00000541600 FAM117AQ9C073 453 aa9.39□□□□□ -0.91
EPHA4-214ENST00000541600 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
EPHA4-214ENST00000541600 ATP10AO60312 1499 aa9.39□□□□□ -0.91
EPHA4-214ENST00000541600 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
EPHA4-214ENST00000541600 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-214ENST00000541600 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
EPHA4-214ENST00000541600 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
EPHA4-214ENST00000541600 C1orf115Q9H7X2 142 aa9.38□□□□□ -0.91
EPHA4-214ENST00000541600 SETD1AO15047 1707 aaKnown RBP9.38□□□□□ -0.91
EPHA4-214ENST00000541600 C3P01024 1663 aa9.38□□□□□ -0.91
EPHA4-214ENST00000541600 ADGBQ8N7X0 1667 aa9.38□□□□□ -0.91
EPHA4-214ENST00000541600 TRAPPC8Q9Y2L5 1435 aa9.38□□□□□ -0.91
EPHA4-214ENST00000541600 MAGI2Q86UL8 1455 aa9.37□□□□□ -0.91
EPHA4-214ENST00000541600 GPR37O15354 613 aa9.37□□□□□ -0.91
EPHA4-214ENST00000541600 PDIA6Q15084 440 aa9.37□□□□□ -0.91
EPHA4-214ENST00000541600 GPHNQ9NQX3 736 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-214ENST00000541600 RRP7BPQ9NSQ0 103 aa9.37□□□□□ -0.91
EPHA4-214ENST00000541600 CROCC2H7BZ55 1655 aa9.36□□□□□ -0.91
EPHA4-214ENST00000541600 SHANK2Q9UPX8 1470 aa9.36□□□□□ -0.91
EPHA4-214ENST00000541600 DPYSL4O14531 572 aa9.36□□□□□ -0.91
EPHA4-214ENST00000541600 PLEKHG3A1L390 1219 aa9.35□□□□□ -0.91
EPHA4-214ENST00000541600 ANP32CO43423 234 aa9.35□□□□□ -0.91
EPHA4-214ENST00000541600 TOM1O60784 492 aa9.35□□□□□ -0.91
EPHA4-214ENST00000541600 ARID3AQ99856 593 aa9.35□□□□□ -0.91
EPHA4-214ENST00000541600 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
EPHA4-214ENST00000541600 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
EPHA4-214ENST00000541600 C9orf84Q5VXU9 1444 aa9.34□□□□□ -0.91
EPHA4-214ENST00000541600 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms