RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
HMGA2-210ENST00000541363 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.62■□□□□ 0.57
HMGA2-210ENST00000541363 AMPHP49418 695 aa18.62■□□□□ 0.57
HMGA2-210ENST00000541363 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
HMGA2-210ENST00000541363 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
HMGA2-210ENST00000541363 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
HMGA2-210ENST00000541363 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
HMGA2-210ENST00000541363 INCENPQ9NQS7 918 aa18.61■□□□□ 0.57
HMGA2-210ENST00000541363 REC8O95072 547 aa18.61■□□□□ 0.57
HMGA2-210ENST00000541363 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
HMGA2-210ENST00000541363 PDILTQ8N807 584 aa18.6■□□□□ 0.57
HMGA2-210ENST00000541363 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
HMGA2-210ENST00000541363 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
HMGA2-210ENST00000541363 BRMS1Q9HCU9 246 aa18.59■□□□□ 0.57
HMGA2-210ENST00000541363 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
HMGA2-210ENST00000541363 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
HMGA2-210ENST00000541363 GOLGA6L10A6NI86 522 aa18.59■□□□□ 0.57
HMGA2-210ENST00000541363 CENPQQ7L2Z9 268 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-210ENST00000541363 ANKRD62A6NC57 917 aa18.58■□□□□ 0.57
HMGA2-210ENST00000541363 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.57
HMGA2-210ENST00000541363 CCDC73Q6ZRK6 1079 aa18.58■□□□□ 0.57
HMGA2-210ENST00000541363 EEA1Q15075 1411 aa18.58■□□□□ 0.56
HMGA2-210ENST00000541363 KIAA0754O94854 1291 aa18.57■□□□□ 0.56
HMGA2-210ENST00000541363 SYCP1Q15431 976 aa18.57■□□□□ 0.56
HMGA2-210ENST00000541363 ENOX2Q16206 610 aaKnown RBP18.57■□□□□ 0.56
HMGA2-210ENST00000541363 MSH5O43196 834 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 CCP110O43303 1012 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 AXDND1Q5T1B0 1012 aaPredicted RBP18.56■□□□□ 0.56
HMGA2-210ENST00000541363 C1orf141Q5JVX7 400 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 SMARCE1Q969G3 411 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 DYDC1Q8WWB3 177 aa18.56■□□□□ 0.56
HMGA2-210ENST00000541363 EZRP15311 586 aaKnown RBP18.55■□□□□ 0.56
HMGA2-210ENST00000541363 CCDC39Q9UFE4 941 aa18.55■□□□□ 0.56
HMGA2-210ENST00000541363 TMEM132AQ24JP5 1023 aa18.55■□□□□ 0.56
HMGA2-210ENST00000541363 TTLL5Q6EMB2 1281 aa18.55■□□□□ 0.56
HMGA2-210ENST00000541363 CT47B1P0C2W7 299 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-210ENST00000541363 NGDNQ8NEJ9 315 aaKnown RBP18.54■□□□□ 0.56
HMGA2-210ENST00000541363 SMC3Q9UQE7 1217 aa18.54■□□□□ 0.56
HMGA2-210ENST00000541363 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
HMGA2-210ENST00000541363 BCL11BQ9C0K0 894 aaPredicted RBP18.53■□□□□ 0.56
HMGA2-210ENST00000541363 XBP1P17861 261 aa18.53■□□□□ 0.56
HMGA2-210ENST00000541363 IFIT2P09913 472 aaKnown RBP18.53■□□□□ 0.56
HMGA2-210ENST00000541363 LTV1Q96GA3 475 aaPredicted RBP18.53■□□□□ 0.56
HMGA2-210ENST00000541363 C9orf78Q9NZ63 289 aaPredicted RBP18.52■□□□□ 0.56
HMGA2-210ENST00000541363 MAGEC2Q9UBF1 373 aaPredicted RBP18.51■□□□□ 0.55
HMGA2-210ENST00000541363 VPS37CA5D8V6 355 aaPredicted RBP18.51■□□□□ 0.55
HMGA2-210ENST00000541363 CLASRPQ8N2M8 674 aaKnown RBP18.51■□□□□ 0.55
HMGA2-210ENST00000541363 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
HMGA2-210ENST00000541363 SAMD1Q6SPF0 538 aaPredicted RBP18.5■□□□□ 0.55
HMGA2-210ENST00000541363 GBP2P32456 591 aaPredicted RBP18.5■□□□□ 0.55
HMGA2-210ENST00000541363 NUCB2P80303 420 aa18.5■□□□□ 0.55
HMGA2-210ENST00000541363 EVA1CP58658 441 aa18.49■□□□□ 0.55
HMGA2-210ENST00000541363 FILIP1LQ4L180 1135 aa18.49■□□□□ 0.55
HMGA2-210ENST00000541363 FOSBP53539 338 aa18.49■□□□□ 0.55
HMGA2-210ENST00000541363 RABEP1Q15276 862 aa18.49■□□□□ 0.55
HMGA2-210ENST00000541363 GGT6Q6P531 493 aa18.49■□□□□ 0.55
HMGA2-210ENST00000541363 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
HMGA2-210ENST00000541363 ROCK1Q13464 1354 aa18.48■□□□□ 0.55
HMGA2-210ENST00000541363 LETM1O95202 739 aaPredicted RBP18.48■□□□□ 0.55
HMGA2-210ENST00000541363 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
HMGA2-210ENST00000541363 EID1Q9Y6B2 187 aa18.47■□□□□ 0.55
HMGA2-210ENST00000541363 TTC5Q8N0Z6 440 aa18.47■□□□□ 0.55
HMGA2-210ENST00000541363 USP8P40818 1118 aa18.46■□□□□ 0.55
HMGA2-210ENST00000541363 TSHZ2Q9NRE2 1034 aa18.46■□□□□ 0.55
HMGA2-210ENST00000541363 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
HMGA2-210ENST00000541363 CDK5RAP3Q96JB5 506 aa18.45■□□□□ 0.54
HMGA2-210ENST00000541363 CCDC97Q96F63 343 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-210ENST00000541363 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
HMGA2-210ENST00000541363 RALYLQ86SE5 291 aaKnown RBP18.45■□□□□ 0.54
HMGA2-210ENST00000541363 SLC4A3P48751 1232 aa18.45■□□□□ 0.54
HMGA2-210ENST00000541363 LUC7LQ9NQ29 371 aaKnown RBP18.45■□□□□ 0.54
HMGA2-210ENST00000541363 TXLNBQ8N3L3 684 aa18.44■□□□□ 0.54
HMGA2-210ENST00000541363 PDE4AP27815 886 aa18.44■□□□□ 0.54
HMGA2-210ENST00000541363 ZKSCAN2Q63HK3 967 aa18.44■□□□□ 0.54
HMGA2-210ENST00000541363 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.44■□□□□ 0.543e-8■■□□□ 13.7
HMGA2-210ENST00000541363 SMC2O95347 1197 aa18.44■□□□□ 0.54
HMGA2-210ENST00000541363 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
HMGA2-210ENST00000541363 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
HMGA2-210ENST00000541363 INTS3Q68E01 1043 aaKnown RBP18.43■□□□□ 0.54
HMGA2-210ENST00000541363 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
HMGA2-210ENST00000541363 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
HMGA2-210ENST00000541363 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
HMGA2-210ENST00000541363 ZNHIT6Q9NWK9 470 aaKnown RBP18.42■□□□□ 0.54
HMGA2-210ENST00000541363 TXLNAP40222 546 aa18.42■□□□□ 0.54
HMGA2-210ENST00000541363 TAF3Q5VWG9 929 aa18.42■□□□□ 0.54
HMGA2-210ENST00000541363 SDF4Q9BRK5 362 aa18.42■□□□□ 0.54
HMGA2-210ENST00000541363 DDX58O95786 925 aaKnown RBP18.42■□□□□ 0.54
HMGA2-210ENST00000541363 SETD5Q9C0A6 1442 aa18.42■□□□□ 0.54
HMGA2-210ENST00000541363 IKQ13123 557 aaPredicted RBP18.42■□□□□ 0.54
HMGA2-210ENST00000541363 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
HMGA2-210ENST00000541363 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
HMGA2-210ENST00000541363 TEFQ10587 303 aa18.41■□□□□ 0.54
HMGA2-210ENST00000541363 PKD2Q13563 968 aa18.41■□□□□ 0.54
HMGA2-210ENST00000541363 CCDC181Q5TID7 509 aa18.41■□□□□ 0.54
HMGA2-210ENST00000541363 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-210ENST00000541363 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
HMGA2-210ENST00000541363 EIF3JO75822 258 aaKnown RBP18.4■□□□□ 0.54
HMGA2-210ENST00000541363 TAX1BP1Q86VP1 789 aa18.4■□□□□ 0.54
HMGA2-210ENST00000541363 ERC2O15083 957 aa18.4■□□□□ 0.54
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