RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 C14orf37Q86TY3 774 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 IFT172Q9UG01 1749 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 NUP155O75694 1391 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 RICTORQ6R327 1708 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 PKD2Q13563 968 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 TET3O43151 1660 aa6.95□□□□□ -1.3
PROM1-220ENST00000540805 CANXP27824 592 aaKnown RBP6.95□□□□□ -1.3
PROM1-220ENST00000540805 CLTCL1P53675 1640 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 TSPOAP1O95153 1857 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 ADAMTSL3P82987 1691 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 ABCA6Q8N139 1617 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 RNF123Q5XPI4 1314 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 A2MP01023 1474 aa6.94□□□□□ -1.3
PROM1-220ENST00000540805 PTPRTO14522 1441 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 NEURL4Q96JN8 1562 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 TRPM2O94759 1503 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 RGL3Q3MIN7 710 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 SIGLEC1Q9BZZ2 1709 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 KIF7Q2M1P5 1343 aa6.93□□□□□ -1.3
PROM1-220ENST00000540805 MADDQ8WXG6 1647 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 MROH2AA6NES4 1674 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 CFAP74Q9C0B2 1584 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 MLECQ14165 292 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 PRAG1Q86YV5 1406 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 LMTK3Q96Q04 1460 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 ARXQ96QS3 562 aa6.92□□□□□ -1.3
PROM1-220ENST00000540805 LMTK2Q8IWU2 1503 aa6.91□□□□□ -1.3
PROM1-220ENST00000540805 AFAP1Q8N556 730 aa6.91□□□□□ -1.3
PROM1-220ENST00000540805 USP35Q9P2H5 1018 aa6.91□□□□□ -1.3
PROM1-220ENST00000540805 IQGAP1P46940 1657 aa6.91□□□□□ -1.3
PROM1-220ENST00000540805 SOCS7O14512 581 aa6.91□□□□□ -1.3
PROM1-220ENST00000540805 FRAT1Q92837 279 aaPredicted RBP6.91□□□□□ -1.3
PROM1-220ENST00000540805 EFCAB6Q5THR3 1501 aa6.9□□□□□ -1.3
PROM1-220ENST00000540805 POGZQ7Z3K3 1410 aa6.9□□□□□ -1.3
PROM1-220ENST00000540805 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.3
PROM1-220ENST00000540805 DHX29Q7Z478 1369 aaKnown RBP6.9□□□□□ -1.31
PROM1-220ENST00000540805 TCERG1O14776 1098 aaKnown RBP6.9□□□□□ -1.31
PROM1-220ENST00000540805 GPRASP1Q5JY77 1395 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 MLH3Q9UHC1 1453 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
PROM1-220ENST00000540805 SCAPERQ9BY12 1400 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 LMOD2Q6P5Q4 547 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 DIP2CQ9Y2E4 1556 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
PROM1-220ENST00000540805 UGGT1Q9NYU2 1555 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 PIK3C2BO00750 1634 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 ZNF518AQ6AHZ1 1483 aa6.89□□□□□ -1.31
PROM1-220ENST00000540805 KIAA1210Q9ULL0 1709 aa6.88□□□□□ -1.31
PROM1-220ENST00000540805 SPATA31D1Q6ZQQ2 1576 aa6.87□□□□□ -1.31
PROM1-220ENST00000540805 WASHC2CQ9Y4E1 1318 aa6.87□□□□□ -1.31
PROM1-220ENST00000540805 PDE4AP27815 886 aa6.87□□□□□ -1.31
PROM1-220ENST00000540805 NRXN1Q9ULB1 1477 aa6.87□□□□□ -1.31
PROM1-220ENST00000540805 RRP1P56182 461 aaKnown RBP6.87□□□□□ -1.31
PROM1-220ENST00000540805 CD109Q6YHK3 1445 aa6.87□□□□□ -1.31
PROM1-220ENST00000540805 MYOM1P52179 1685 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 HAP1P54257 671 aaPredicted RBP6.86□□□□□ -1.31
PROM1-220ENST00000540805 NEO1Q92859 1461 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 USP47Q96K76 1375 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 MS4A1P11836 297 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 CAMSAP1Q5T5Y3 1602 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 ZMYM4Q5VZL5 1548 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 TMC1Q8TDI8 760 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 PPLO60437 1756 aa6.86□□□□□ -1.31
PROM1-220ENST00000540805 SPAG9O60271 1321 aaKnown RBP6.85□□□□□ -1.31
PROM1-220ENST00000540805 GSE1Q14687 1217 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 EXOC6Q8TAG9 804 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 BACH2Q9BYV9 841 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 CCDC144AA2RUR9 1427 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 SYNMO15061 1565 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 ADGRB3O60242 1522 aa6.85□□□□□ -1.31
PROM1-220ENST00000540805 RRAGDQ9NQL2 400 aaPredicted RBP6.85□□□□□ -1.31
PROM1-220ENST00000540805 PNISRQ8TF01 805 aaKnown RBP6.85□□□□□ -1.31
PROM1-220ENST00000540805 ZC3H13Q5T200 1668 aaKnown RBP6.84□□□□□ -1.31
PROM1-220ENST00000540805 ABCC3O15438 1527 aa6.84□□□□□ -1.31
PROM1-220ENST00000540805 ROCK2O75116 1388 aaKnown RBP6.84□□□□□ -1.31
PROM1-220ENST00000540805 KIF1BO60333 1816 aa6.84□□□□□ -1.31
PROM1-220ENST00000540805 MYO3AQ8NEV4 1616 aa6.84□□□□□ -1.31
PROM1-220ENST00000540805 FAM69CQ0P6D2 419 aa6.83□□□□□ -1.32
PROM1-220ENST00000540805 RCAN3Q9UKA8 241 aa6.83□□□□□ -1.32
PROM1-220ENST00000540805 LRPPRCP42704 1394 aaKnown RBP6.83□□□□□ -1.32
PROM1-220ENST00000540805 NFKBIBQ15653 356 aa6.83□□□□□ -1.32
PROM1-220ENST00000540805 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 TESK2Q96S53 571 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 NPATQ14207 1427 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 MYOM2P54296 1465 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 BRD4O60885 1362 aaPredicted RBP6.82□□□□□ -1.32
PROM1-220ENST00000540805 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 MYO5BQ9ULV0 1848 aa6.82□□□□□ -1.32
PROM1-220ENST00000540805 FRAT2O75474 233 aaPredicted RBP6.82□□□□□ -1.32
PROM1-220ENST00000540805 RBM10P98175 930 aaKnown RBP6.82□□□□□ -1.32
PROM1-220ENST00000540805 YEATS2Q9ULM3 1422 aa6.81□□□□□ -1.32
PROM1-220ENST00000540805 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
PROM1-220ENST00000540805 MYBBP1AQ9BQG0 1328 aaKnown RBP6.81□□□□□ -1.32
PROM1-220ENST00000540805 SOX12O15370 315 aa6.81□□□□□ -1.32
PROM1-220ENST00000540805 ADGRB1O14514 1584 aa6.81□□□□□ -1.32
PROM1-220ENST00000540805 KTN1Q86UP2 1357 aaKnown RBP6.81□□□□□ -1.32
PROM1-220ENST00000540805 NOS1P29475 1434 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms