RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 ESF1Q9H501 851 aaKnown RBP34.37■■■■□ 3.09
TTC3-225ENST00000540756 ZMYM3Q14202 1370 aa34.36■■■■□ 3.09
TTC3-225ENST00000540756 KIF7Q2M1P5 1343 aa34.36■■■■□ 3.09
TTC3-225ENST00000540756 LAMC1P11047 1609 aa34.35■■■■□ 3.09
TTC3-225ENST00000540756 NUTM2DQ5VT03 806 aaPredicted RBP34.35■■■■□ 3.09
TTC3-225ENST00000540756 POLR1AO95602 1720 aaPredicted RBP34.33■■■■□ 3.09
TTC3-225ENST00000540756 CFAP70Q5T0N1 1121 aa34.32■■■■□ 3.08
TTC3-225ENST00000540756 SPATA31D1Q6ZQQ2 1576 aa34.32■■■■□ 3.08
TTC3-225ENST00000540756 NRXN1Q9ULB1 1477 aa34.32■■■■□ 3.08
TTC3-225ENST00000540756 TMEM131LA2VDJ0 1609 aa34.31■■■■□ 3.08
TTC3-225ENST00000540756 NEXMIFQ5QGS0 1516 aa34.27■■■■□ 3.08
TTC3-225ENST00000540756 RPGRIP1LQ68CZ1 1315 aa34.27■■■■□ 3.08
TTC3-225ENST00000540756 KIAA1210Q9ULL0 1709 aa34.26■■■■□ 3.07
TTC3-225ENST00000540756 POLR3GLQ9BT43 218 aa34.23■■■■□ 3.07
TTC3-225ENST00000540756 IQGAP1P46940 1657 aa34.22■■■■□ 3.07
TTC3-225ENST00000540756 PIK3C2GO75747 1445 aa34.22■■■■□ 3.07
TTC3-225ENST00000540756 SENP3Q9H4L4 574 aaPredicted RBP34.2■■■■□ 3.07
TTC3-225ENST00000540756 CEBPAP49715 358 aaPredicted RBP34.19■■■■□ 3.06
TTC3-225ENST00000540756 TESK2Q96S53 571 aa34.18■■■■□ 3.06
TTC3-225ENST00000540756 STAG3Q9UJ98 1225 aa34.18■■■■□ 3.06
TTC3-225ENST00000540756 SCAF11Q99590 1463 aaKnown RBP34.16■■■■□ 3.06
TTC3-225ENST00000540756 VGFO15240 615 aaPredicted RBP34.15■■■■□ 3.06
TTC3-225ENST00000540756 C14orf93Q9H972 538 aaKnown RBP34.14■■■■□ 3.06
TTC3-225ENST00000540756 FER1L4A9Z1Z3 1794 aa34.14■■■■□ 3.06
TTC3-225ENST00000540756 A2ML1A8K2U0 1454 aa34.13■■■■□ 3.05
TTC3-225ENST00000540756 PLPPR3Q6T4P5 718 aa34.12■■■■□ 3.05
TTC3-225ENST00000540756 TNRQ92752 1358 aa34.11■■■■□ 3.05
TTC3-225ENST00000540756 TMEM132EQ6IEE7 984 aa34.1■■■■□ 3.05
TTC3-225ENST00000540756 DISP3Q9P2K9 1392 aa34.1■■■■□ 3.05
TTC3-225ENST00000540756 C3P01024 1663 aa34.09■■■■□ 3.05
TTC3-225ENST00000540756 ANP32CO43423 234 aa34.08■■■■□ 3.05
TTC3-225ENST00000540756 ZFYVE9O95405 1425 aa34.07■■■■□ 3.04
TTC3-225ENST00000540756 ADGRB1O14514 1584 aa34.06■■■■□ 3.04
TTC3-225ENST00000540756 SETBP1Q9Y6X0 1596 aa34.06■■■■□ 3.04
TTC3-225ENST00000540756 YTHDC1Q96MU7 727 aaKnown RBP34.03■■■■□ 3.04
TTC3-225ENST00000540756 TRAK1Q9UPV9 953 aa33.99■■■■□ 3.03
TTC3-225ENST00000540756 RIMS2Q9UQ26 1411 aa33.99■■■■□ 3.03
TTC3-225ENST00000540756 EIF3AQ14152 1382 aaKnown RBP33.98■■■■□ 3.03
TTC3-225ENST00000540756 TMF1P82094 1093 aa33.97■■■■□ 3.03
TTC3-225ENST00000540756 UBR1Q8IWV7 1749 aa33.95■■■■□ 3.03
TTC3-225ENST00000540756 ASXL1Q8IXJ9 1541 aa33.94■■■■□ 3.02
TTC3-225ENST00000540756 RIMS1Q86UR5 1692 aaKnown RBP33.91■■■■□ 3.02
TTC3-225ENST00000540756 MYO3AQ8NEV4 1616 aa33.88■■■■□ 3.01
TTC3-225ENST00000540756 ALKQ9UM73 1620 aa33.88■■■■□ 3.01
TTC3-225ENST00000540756 CNGB1Q14028 1251 aaPredicted RBP33.87■■■■□ 3.01
TTC3-225ENST00000540756 NLRP1Q9C000 1473 aa33.87■■■■□ 3.01
TTC3-225ENST00000540756 KDM5AP29375 1690 aaKnown RBP33.87■■■■□ 3.01
TTC3-225ENST00000540756 STK26Q9P289 416 aa33.86■■■■□ 3.01
TTC3-225ENST00000540756 CENPJQ9HC77 1338 aaPredicted RBP33.86■■■■□ 3.01
TTC3-225ENST00000540756 PRKRIP1Q9H875 184 aaPredicted RBP33.85■■■■□ 3.01
TTC3-225ENST00000540756 ADAMTSL3P82987 1691 aa33.84■■■■□ 3.01
TTC3-225ENST00000540756 TMEM2Q9UHN6 1383 aa33.84■■■■□ 3.01
TTC3-225ENST00000540756 ARHGEF28Q8N1W1 1705 aaKnown RBP33.83■■■■□ 3.01
TTC3-225ENST00000540756 CCER2I3L3R5 266 aa33.83■■■■□ 3.01
TTC3-225ENST00000540756 PTPRMP28827 1452 aa33.83■■■■□ 3.01
TTC3-225ENST00000540756 QRICH2Q9H0J4 1663 aa33.82■■■■□ 3
TTC3-225ENST00000540756 NRXN3Q9Y4C0 1643 aa33.81■■■■□ 3
TTC3-225ENST00000540756 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.8■■■■□ 3
TTC3-225ENST00000540756 SETD1AO15047 1707 aaKnown RBP33.79■■■■□ 3
TTC3-225ENST00000540756 YTHDC2Q9H6S0 1430 aaKnown RBP33.77■■■■□ 3
TTC3-225ENST00000540756 LTKP29376 864 aa33.77■■■■□ 3
TTC3-225ENST00000540756 PANK3Q9H999 370 aa33.76■■■■□ 3
TTC3-225ENST00000540756 SBNO2Q9Y2G9 1366 aa33.76■■■□□ 2.99
TTC3-225ENST00000540756 SAFB2Q14151 953 aaKnown RBP eCLIP33.75■■■□□ 2.99
TTC3-225ENST00000540756 CCDC184Q52MB2 194 aa33.74■■■□□ 2.99
TTC3-225ENST00000540756 CDCA8Q53HL2 280 aa33.74■■■□□ 2.99
TTC3-225ENST00000540756 PER1O15534 1290 aaPredicted RBP33.72■■■□□ 2.99
TTC3-225ENST00000540756 HDGFP51858 240 aaKnown RBP33.72■■■□□ 2.99
TTC3-225ENST00000540756 MYOM1P52179 1685 aa33.71■■■□□ 2.99
TTC3-225ENST00000540756 BCANQ96GW7 911 aa33.7■■■□□ 2.99
TTC3-225ENST00000540756 METP08581 1390 aa33.69■■■□□ 2.98
TTC3-225ENST00000540756 TXNDC2Q86VQ3 553 aa33.69■■■□□ 2.98
TTC3-225ENST00000540756 PRAM1Q96QH2 718 aa33.67■■■□□ 2.98
TTC3-225ENST00000540756 SLC24A1O60721 1099 aa33.67■■■□□ 2.98
TTC3-225ENST00000540756 SLIT1O75093 1534 aa33.64■■■□□ 2.98
TTC3-225ENST00000540756 ARHGAP23Q9P227 1491 aa33.64■■■□□ 2.97
TTC3-225ENST00000540756 CEP170BQ9Y4F5 1589 aaPredicted RBP33.63■■■□□ 2.97
TTC3-225ENST00000540756 THEMISQ8N1K5 641 aaPredicted RBP33.63■■■□□ 2.97
TTC3-225ENST00000540756 TULP4Q9NRJ4 1543 aa33.62■■■□□ 2.97
TTC3-225ENST00000540756 ADAMTS13Q76LX8 1427 aa33.62■■■□□ 2.97
TTC3-225ENST00000540756 LRPPRCP42704 1394 aaKnown RBP33.61■■■□□ 2.97
TTC3-225ENST00000540756 POGKQ9P215 609 aa33.61■■■□□ 2.97
TTC3-225ENST00000540756 PLEKHG1Q9ULL1 1385 aa33.6■■■□□ 2.97
TTC3-225ENST00000540756 WAPLQ7Z5K2 1190 aa33.6■■■□□ 2.97
TTC3-225ENST00000540756 EID1Q9Y6B2 187 aa33.6■■■□□ 2.97
TTC3-225ENST00000540756 MINK1Q8N4C8 1332 aaPredicted RBP33.59■■■□□ 2.97
TTC3-225ENST00000540756 PLEKHH1Q9ULM0 1364 aa33.57■■■□□ 2.96
TTC3-225ENST00000540756 CENPBP07199 599 aaPredicted RBP33.57■■■□□ 2.96
TTC3-225ENST00000540756 SLC26A8Q96RN1 970 aa33.57■■■□□ 2.96
TTC3-225ENST00000540756 CC2D1BQ5T0F9 858 aaKnown RBP33.56■■■□□ 2.96
TTC3-225ENST00000540756 ABCC11Q96J66 1382 aa33.55■■■□□ 2.96
TTC3-225ENST00000540756 EVC2Q86UK5 1308 aa33.55■■■□□ 2.96
TTC3-225ENST00000540756 CABP2Q9NPB3 220 aa33.55■■■□□ 2.96
TTC3-225ENST00000540756 SETD1BQ9UPS6 1966 aaKnown RBP33.54■■■□□ 2.96
TTC3-225ENST00000540756 MRS2Q9HD23 443 aa33.53■■■□□ 2.96
TTC3-225ENST00000540756 DLC1Q96QB1 1528 aa33.53■■■□□ 2.96
TTC3-225ENST00000540756 SLC12A5Q9H2X9 1139 aa33.52■■■□□ 2.96
TTC3-225ENST00000540756 TMC1Q8TDI8 760 aa33.51■■■□□ 2.95
TTC3-225ENST00000540756 KTN1Q86UP2 1357 aaKnown RBP33.51■■■□□ 2.95
TTC3-225ENST00000540756 MED14O60244 1454 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms