RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 POGZQ7Z3K3 1410 aa16.65■□□□□ 0.26
USP10-202ENST00000540269 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
USP10-202ENST00000540269 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
USP10-202ENST00000540269 MAP3K4Q9Y6R4 1608 aa16.64■□□□□ 0.25
USP10-202ENST00000540269 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
USP10-202ENST00000540269 CFAP65Q6ZU64 1925 aaKnown RBP16.63■□□□□ 0.25
USP10-202ENST00000540269 GGT6Q6P531 493 aa16.63■□□□□ 0.25
USP10-202ENST00000540269 RAPGEF3O95398 923 aa16.62■□□□□ 0.25
USP10-202ENST00000540269 MYOM1P52179 1685 aa16.62■□□□□ 0.25
USP10-202ENST00000540269 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
USP10-202ENST00000540269 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
USP10-202ENST00000540269 NPATQ14207 1427 aa16.61■□□□□ 0.25
USP10-202ENST00000540269 MYOM2P54296 1465 aa16.61■□□□□ 0.25
USP10-202ENST00000540269 NEURL4Q96JN8 1562 aa16.61■□□□□ 0.25
USP10-202ENST00000540269 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
USP10-202ENST00000540269 KIF1BO60333 1816 aa16.61■□□□□ 0.25
USP10-202ENST00000540269 KIAA1210Q9ULL0 1709 aa16.6■□□□□ 0.25
USP10-202ENST00000540269 BLMP54132 1417 aaPredicted RBP16.6■□□□□ 0.25
USP10-202ENST00000540269 MLH3Q9UHC1 1453 aa16.59■□□□□ 0.25
USP10-202ENST00000540269 NOS1P29475 1434 aa16.59■□□□□ 0.25
USP10-202ENST00000540269 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
USP10-202ENST00000540269 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
USP10-202ENST00000540269 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
USP10-202ENST00000540269 SYNMO15061 1565 aa16.59■□□□□ 0.25
USP10-202ENST00000540269 ERVK-7P63135 1459 aa16.58■□□□□ 0.25
USP10-202ENST00000540269 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
USP10-202ENST00000540269 HECW2Q9P2P5 1572 aa16.58■□□□□ 0.24
USP10-202ENST00000540269 ADGRB3O60242 1522 aa16.57■□□□□ 0.24
USP10-202ENST00000540269 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
USP10-202ENST00000540269 MSH5O43196 834 aa16.56■□□□□ 0.24
USP10-202ENST00000540269 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
USP10-202ENST00000540269 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
USP10-202ENST00000540269 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
USP10-202ENST00000540269 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
USP10-202ENST00000540269 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
USP10-202ENST00000540269 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
USP10-202ENST00000540269 CDCA8Q53HL2 280 aa16.54■□□□□ 0.24
USP10-202ENST00000540269 ABCC3O15438 1527 aa16.54■□□□□ 0.24
USP10-202ENST00000540269 SIGLEC1Q9BZZ2 1709 aa16.53■□□□□ 0.24
USP10-202ENST00000540269 KDM5AP29375 1690 aaKnown RBP16.53■□□□□ 0.24
USP10-202ENST00000540269 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
USP10-202ENST00000540269 TMEM132EQ6IEE7 984 aa16.53■□□□□ 0.24
USP10-202ENST00000540269 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.24
USP10-202ENST00000540269 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
USP10-202ENST00000540269 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
USP10-202ENST00000540269 PDE3BQ13370 1112 aa16.51■□□□□ 0.23
USP10-202ENST00000540269 INSRP06213 1382 aa16.51■□□□□ 0.23
USP10-202ENST00000540269 PLEKHH1Q9ULM0 1364 aa16.51■□□□□ 0.23
USP10-202ENST00000540269 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
USP10-202ENST00000540269 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
USP10-202ENST00000540269 PPLO60437 1756 aa16.5■□□□□ 0.23
USP10-202ENST00000540269 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
USP10-202ENST00000540269 NEO1Q92859 1461 aa16.49■□□□□ 0.23
USP10-202ENST00000540269 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
USP10-202ENST00000540269 PLIN1O60240 522 aa16.49■□□□□ 0.23
USP10-202ENST00000540269 ANP32EQ9BTT0 268 aa16.49■□□□□ 0.23
USP10-202ENST00000540269 C14orf93Q9H972 538 aaKnown RBP16.49■□□□□ 0.23
USP10-202ENST00000540269 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
USP10-202ENST00000540269 CAMSAP1Q5T5Y3 1602 aa16.48■□□□□ 0.23
USP10-202ENST00000540269 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
USP10-202ENST00000540269 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
USP10-202ENST00000540269 CENPJQ9HC77 1338 aaPredicted RBP16.47■□□□□ 0.23
USP10-202ENST00000540269 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
USP10-202ENST00000540269 SETBP1Q9Y6X0 1596 aa16.46■□□□□ 0.23
USP10-202ENST00000540269 CCDC146Q8IYE0 955 aa16.46■□□□□ 0.23
USP10-202ENST00000540269 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
USP10-202ENST00000540269 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
USP10-202ENST00000540269 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP10-202ENST00000540269 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
USP10-202ENST00000540269 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
USP10-202ENST00000540269 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
USP10-202ENST00000540269 ZNF521Q96K83 1311 aa16.44■□□□□ 0.22
USP10-202ENST00000540269 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
USP10-202ENST00000540269 IDI1Q13907 227 aa16.42■□□□□ 0.22
USP10-202ENST00000540269 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
USP10-202ENST00000540269 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
USP10-202ENST00000540269 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
USP10-202ENST00000540269 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
USP10-202ENST00000540269 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
USP10-202ENST00000540269 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
USP10-202ENST00000540269 RPGRIP1LQ68CZ1 1315 aa16.4■□□□□ 0.22
USP10-202ENST00000540269 NSD3Q9BZ95 1437 aa16.39■□□□□ 0.21
USP10-202ENST00000540269 APAF1O14727 1248 aa16.39■□□□□ 0.21
USP10-202ENST00000540269 GLI2P10070 1586 aa16.38■□□□□ 0.21
USP10-202ENST00000540269 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
USP10-202ENST00000540269 DMRT2Q9Y5R5 561 aa16.38■□□□□ 0.21
USP10-202ENST00000540269 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
USP10-202ENST00000540269 SLC24A1O60721 1099 aa16.37■□□□□ 0.21
USP10-202ENST00000540269 SAFB2Q14151 953 aaKnown RBP eCLIP16.37■□□□□ 0.21
USP10-202ENST00000540269 FBXO31Q5XUX0 539 aaPredicted RBP16.37■□□□□ 0.21
USP10-202ENST00000540269 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
USP10-202ENST00000540269 SKAP1Q86WV1 359 aa16.36■□□□□ 0.21
USP10-202ENST00000540269 MYO5BQ9ULV0 1848 aa16.36■□□□□ 0.21
USP10-202ENST00000540269 TULP4Q9NRJ4 1543 aa16.36■□□□□ 0.21
USP10-202ENST00000540269 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
USP10-202ENST00000540269 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
USP10-202ENST00000540269 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
USP10-202ENST00000540269 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
USP10-202ENST00000540269 FAM69CQ0P6D2 419 aa16.34■□□□□ 0.21
USP10-202ENST00000540269 CABP2Q9NPB3 220 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms