RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 ADGRB3O60242 1522 aa24.79■■□□□ 1.56
PUDP-206ENST00000540122 KIF15Q9NS87 1388 aa24.79■■□□□ 1.56
PUDP-206ENST00000540122 RGS12O14924 1447 aa24.76■■□□□ 1.55
PUDP-206ENST00000540122 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
PUDP-206ENST00000540122 NUTM2BA6NNL0 878 aaPredicted RBP24.75■■□□□ 1.55
PUDP-206ENST00000540122 NUTM2EB1AL46 878 aaPredicted RBP24.75■■□□□ 1.55
PUDP-206ENST00000540122 NUTM2AQ8IVF1 878 aaPredicted RBP24.75■■□□□ 1.55
PUDP-206ENST00000540122 AFF2P51816 1311 aa24.75■■□□□ 1.55
PUDP-206ENST00000540122 KANK1Q14678 1352 aa24.74■■□□□ 1.55
PUDP-206ENST00000540122 DIP2AQ14689 1571 aa24.74■■□□□ 1.55
PUDP-206ENST00000540122 CHD2O14647 1828 aaKnown RBP24.74■■□□□ 1.55
PUDP-206ENST00000540122 LMTK2Q8IWU2 1503 aa24.73■■□□□ 1.55
PUDP-206ENST00000540122 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
PUDP-206ENST00000540122 NOS1P29475 1434 aa24.72■■□□□ 1.55
PUDP-206ENST00000540122 MYOM3Q5VTT5 1437 aa24.72■■□□□ 1.55
PUDP-206ENST00000540122 PLEKHG1Q9ULL1 1385 aa24.72■■□□□ 1.55
PUDP-206ENST00000540122 CADPS2Q86UW7 1296 aa24.71■■□□□ 1.55
PUDP-206ENST00000540122 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
PUDP-206ENST00000540122 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
PUDP-206ENST00000540122 ATF3P18847 181 aa24.68■■□□□ 1.54
PUDP-206ENST00000540122 C19orf44Q9H6X5 657 aa24.68■■□□□ 1.54
PUDP-206ENST00000540122 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.68■■□□□ 1.54
PUDP-206ENST00000540122 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
PUDP-206ENST00000540122 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
PUDP-206ENST00000540122 RBM6P78332 1123 aaKnown RBP24.66■■□□□ 1.54
PUDP-206ENST00000540122 NUTM2DQ5VT03 806 aaPredicted RBP24.66■■□□□ 1.54
PUDP-206ENST00000540122 PPP1R15AO75807 674 aaPredicted RBP24.65■■□□□ 1.54
PUDP-206ENST00000540122 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
PUDP-206ENST00000540122 QTRT2Q9H974 415 aaKnown RBP24.64■■□□□ 1.54
PUDP-206ENST00000540122 ABCC5O15440 1437 aa24.63■■□□□ 1.53
PUDP-206ENST00000540122 RIMS2Q9UQ26 1411 aa24.63■■□□□ 1.53
PUDP-206ENST00000540122 C8orf37Q96NL8 207 aa24.62■■□□□ 1.53
PUDP-206ENST00000540122 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
PUDP-206ENST00000540122 SETD5Q9C0A6 1442 aa24.61■■□□□ 1.53
PUDP-206ENST00000540122 ATAD2Q6PL18 1390 aa24.59■■□□□ 1.53
PUDP-206ENST00000540122 ZRANB1Q9UGI0 708 aa24.59■■□□□ 1.53
PUDP-206ENST00000540122 ASXL1Q8IXJ9 1541 aa24.59■■□□□ 1.53
PUDP-206ENST00000540122 HDGFP51858 240 aaKnown RBP24.58■■□□□ 1.53
PUDP-206ENST00000540122 ADAMTS13Q76LX8 1427 aa24.58■■□□□ 1.53
PUDP-206ENST00000540122 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
PUDP-206ENST00000540122 MYO5BQ9ULV0 1848 aa24.56■■□□□ 1.52
PUDP-206ENST00000540122 FOXD1Q16676 465 aa24.55■■□□□ 1.52
PUDP-206ENST00000540122 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
PUDP-206ENST00000540122 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
PUDP-206ENST00000540122 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 DCCP43146 1447 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 LRRC59Q96AG4 307 aaKnown RBP24.53■■□□□ 1.52
PUDP-206ENST00000540122 NGLY1Q96IV0 654 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 PNPLA6Q8IY17 1366 aa24.53■■□□□ 1.52
PUDP-206ENST00000540122 DAPK1P53355 1430 aa24.52■■□□□ 1.52
PUDP-206ENST00000540122 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
PUDP-206ENST00000540122 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.51■■□□□ 1.51
PUDP-206ENST00000540122 MST1RQ04912 1400 aa24.5■■□□□ 1.51
PUDP-206ENST00000540122 ANKRD30AQ9BXX3 1397 aa24.49■■□□□ 1.51
PUDP-206ENST00000540122 PTPRUQ92729 1446 aa24.48■■□□□ 1.51
PUDP-206ENST00000540122 AMOTL2Q9Y2J4 779 aa24.48■■□□□ 1.51
PUDP-206ENST00000540122 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
PUDP-206ENST00000540122 TRPM2O94759 1503 aa24.46■■□□□ 1.51
PUDP-206ENST00000540122 VPS8Q8N3P4 1428 aa24.45■■□□□ 1.51
PUDP-206ENST00000540122 ADAMTS2O95450 1211 aa24.45■■□□□ 1.5
PUDP-206ENST00000540122 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
PUDP-206ENST00000540122 CHIC2Q9UKJ5 165 aa24.45■■□□□ 1.5
PUDP-206ENST00000540122 EP400Q96L91 3159 aa24.43■■□□□ 1.5
PUDP-206ENST00000540122 CHGAP10645 457 aaKnown RBP24.43■■□□□ 1.5
PUDP-206ENST00000540122 USP21Q9UK80 565 aa24.41■■□□□ 1.5
PUDP-206ENST00000540122 TRPC5Q9UL62 973 aaPredicted RBP24.41■■□□□ 1.5
PUDP-206ENST00000540122 CCDC125Q86Z20 511 aa24.38■■□□□ 1.49
PUDP-206ENST00000540122 XRN1Q8IZH2 1706 aaKnown RBP24.38■■□□□ 1.49
PUDP-206ENST00000540122 UNC13BO14795 1591 aa24.37■■□□□ 1.49
PUDP-206ENST00000540122 ATRNO75882 1429 aa24.36■■□□□ 1.49
PUDP-206ENST00000540122 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
PUDP-206ENST00000540122 ADGRL3Q9HAR2 1447 aa24.33■■□□□ 1.49
PUDP-206ENST00000540122 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
PUDP-206ENST00000540122 PTCH1Q13635 1447 aa24.32■■□□□ 1.48
PUDP-206ENST00000540122 ANKRD50Q9ULJ7 1429 aa24.3■■□□□ 1.48
PUDP-206ENST00000540122 NRXN3Q9Y4C0 1643 aa24.3■■□□□ 1.48
PUDP-206ENST00000540122 LAMC1P11047 1609 aa24.28■■□□□ 1.48
PUDP-206ENST00000540122 C1orf167Q5SNV9 1468 aa24.27■■□□□ 1.48
PUDP-206ENST00000540122 SOS2Q07890 1332 aaPredicted RBP24.27■■□□□ 1.48
PUDP-206ENST00000540122 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
PUDP-206ENST00000540122 METP08581 1390 aa24.26■■□□□ 1.47
PUDP-206ENST00000540122 LRP5O75197 1615 aa24.24■■□□□ 1.47
PUDP-206ENST00000540122 E9PCH4 1651 aa24.24■■□□□ 1.47
PUDP-206ENST00000540122 BLMP54132 1417 aaPredicted RBP24.23■■□□□ 1.47
PUDP-206ENST00000540122 BCL9LQ86UU0 1499 aa24.23■■□□□ 1.47
PUDP-206ENST00000540122 COL22A1Q8NFW1 1626 aaPredicted RBP24.21■■□□□ 1.47
PUDP-206ENST00000540122 MYOM2P54296 1465 aa24.19■■□□□ 1.46
PUDP-206ENST00000540122 DEFB132Q7Z7B7 95 aa24.19■■□□□ 1.46
PUDP-206ENST00000540122 GJD4Q96KN9 370 aaPredicted RBP24.19■■□□□ 1.46
PUDP-206ENST00000540122 ORAI2Q96SN7 254 aa24.19■■□□□ 1.46
PUDP-206ENST00000540122 IQGAP3Q86VI3 1631 aa24.15■■□□□ 1.46
PUDP-206ENST00000540122 RALGAPBQ86X10 1494 aa24.1■■□□□ 1.45
PUDP-206ENST00000540122 GLI3P10071 1580 aa24.09■■□□□ 1.45
PUDP-206ENST00000540122 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
PUDP-206ENST00000540122 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.45
PUDP-206ENST00000540122 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.45
PUDP-206ENST00000540122 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.45
PUDP-206ENST00000540122 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms