RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 TMEM131LA2VDJ0 1609 aa16.51■□□□□ 0.23
VTN-202ENST00000539746 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
VTN-202ENST00000539746 CDCA8Q53HL2 280 aa16.5■□□□□ 0.23
VTN-202ENST00000539746 C3P01024 1663 aa16.5■□□□□ 0.23
VTN-202ENST00000539746 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
VTN-202ENST00000539746 MADDQ8WXG6 1647 aa16.49■□□□□ 0.23
VTN-202ENST00000539746 UGGT1Q9NYU2 1555 aa16.49■□□□□ 0.23
VTN-202ENST00000539746 SETBP1Q9Y6X0 1596 aa16.47■□□□□ 0.23
VTN-202ENST00000539746 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
VTN-202ENST00000539746 USP47Q96K76 1375 aa16.47■□□□□ 0.23
VTN-202ENST00000539746 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
VTN-202ENST00000539746 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
VTN-202ENST00000539746 IFT172Q9UG01 1749 aa16.46■□□□□ 0.23
VTN-202ENST00000539746 TMEM2Q9UHN6 1383 aa16.46■□□□□ 0.23
VTN-202ENST00000539746 PPLO60437 1756 aa16.46■□□□□ 0.22
VTN-202ENST00000539746 NEXMIFQ5QGS0 1516 aa16.45■□□□□ 0.22
VTN-202ENST00000539746 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
VTN-202ENST00000539746 NBPF8Q3BBV2 869 aa16.45■□□□□ 0.22
VTN-202ENST00000539746 SCAF11Q99590 1463 aaKnown RBP16.45■□□□□ 0.22
VTN-202ENST00000539746 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
VTN-202ENST00000539746 PTPRMP28827 1452 aa16.43■□□□□ 0.22
VTN-202ENST00000539746 SETD1BQ9UPS6 1966 aaKnown RBP16.43■□□□□ 0.22
VTN-202ENST00000539746 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
VTN-202ENST00000539746 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
VTN-202ENST00000539746 SLIT1O75093 1534 aa16.41■□□□□ 0.22
VTN-202ENST00000539746 CEP170BQ9Y4F5 1589 aaPredicted RBP16.4■□□□□ 0.22
VTN-202ENST00000539746 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
VTN-202ENST00000539746 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
VTN-202ENST00000539746 PLEKHG1Q9ULL1 1385 aa16.39■□□□□ 0.21
VTN-202ENST00000539746 UBR1Q8IWV7 1749 aa16.39■□□□□ 0.21
VTN-202ENST00000539746 ANKLE2Q86XL3 938 aa16.39■□□□□ 0.21
VTN-202ENST00000539746 BCANQ96GW7 911 aa16.39■□□□□ 0.21
VTN-202ENST00000539746 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
VTN-202ENST00000539746 CEBPAP49715 358 aaPredicted RBP16.38■□□□□ 0.21
VTN-202ENST00000539746 TMF1P82094 1093 aa16.38■□□□□ 0.21
VTN-202ENST00000539746 DIP2AQ14689 1571 aa16.38■□□□□ 0.21
VTN-202ENST00000539746 ARHGAP23Q9P227 1491 aa16.37■□□□□ 0.21
VTN-202ENST00000539746 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
VTN-202ENST00000539746 SBNO2Q9Y2G9 1366 aa16.37■□□□□ 0.21
VTN-202ENST00000539746 PIK3R4Q99570 1358 aa16.35■□□□□ 0.21
VTN-202ENST00000539746 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
VTN-202ENST00000539746 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
VTN-202ENST00000539746 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
VTN-202ENST00000539746 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
VTN-202ENST00000539746 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
VTN-202ENST00000539746 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
VTN-202ENST00000539746 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
VTN-202ENST00000539746 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
VTN-202ENST00000539746 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
VTN-202ENST00000539746 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
VTN-202ENST00000539746 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
VTN-202ENST00000539746 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
VTN-202ENST00000539746 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
VTN-202ENST00000539746 ABCC11Q96J66 1382 aa16.29■□□□□ 0.2
VTN-202ENST00000539746 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
VTN-202ENST00000539746 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
VTN-202ENST00000539746 POGKQ9P215 609 aa16.28■□□□□ 0.2
VTN-202ENST00000539746 MYO5BQ9ULV0 1848 aa16.28■□□□□ 0.2
VTN-202ENST00000539746 EVC2Q86UK5 1308 aa16.27■□□□□ 0.2
VTN-202ENST00000539746 FAM135BQ49AJ0 1406 aa16.27■□□□□ 0.19
VTN-202ENST00000539746 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
VTN-202ENST00000539746 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
VTN-202ENST00000539746 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
VTN-202ENST00000539746 TECPR2O15040 1411 aa16.25■□□□□ 0.19
VTN-202ENST00000539746 MED14O60244 1454 aa16.24■□□□□ 0.19
VTN-202ENST00000539746 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
VTN-202ENST00000539746 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
VTN-202ENST00000539746 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
VTN-202ENST00000539746 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
VTN-202ENST00000539746 WASHC2AQ641Q2 1341 aa16.22■□□□□ 0.19
VTN-202ENST00000539746 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
VTN-202ENST00000539746 NPHP4O75161 1426 aaPredicted RBP16.21■□□□□ 0.19
VTN-202ENST00000539746 ANP32CO43423 234 aa16.21■□□□□ 0.19
VTN-202ENST00000539746 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
VTN-202ENST00000539746 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
VTN-202ENST00000539746 LTKP29376 864 aa16.2■□□□□ 0.18
VTN-202ENST00000539746 TESK2Q96S53 571 aa16.2■□□□□ 0.18
VTN-202ENST00000539746 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
VTN-202ENST00000539746 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
VTN-202ENST00000539746 CPS1P31327 1500 aa16.19■□□□□ 0.18
VTN-202ENST00000539746 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
VTN-202ENST00000539746 STK26Q9P289 416 aa16.18■□□□□ 0.18
VTN-202ENST00000539746 KDM4FA0A1W2PPD8 638 aa16.17■□□□□ 0.18
VTN-202ENST00000539746 DDX10Q13206 875 aaKnown RBP16.17■□□□□ 0.18
VTN-202ENST00000539746 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
VTN-202ENST00000539746 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
VTN-202ENST00000539746 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
VTN-202ENST00000539746 NRXN3Q9Y4C0 1643 aa16.16■□□□□ 0.18
VTN-202ENST00000539746 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.18
VTN-202ENST00000539746 METP08581 1390 aa16.14■□□□□ 0.17
VTN-202ENST00000539746 ARHGEF28Q8N1W1 1705 aaKnown RBP16.14■□□□□ 0.17
VTN-202ENST00000539746 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
VTN-202ENST00000539746 AMOTL2Q9Y2J4 779 aa16.13■□□□□ 0.17
VTN-202ENST00000539746 SETD1AO15047 1707 aaKnown RBP16.13■□□□□ 0.17
VTN-202ENST00000539746 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
VTN-202ENST00000539746 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
VTN-202ENST00000539746 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
VTN-202ENST00000539746 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
VTN-202ENST00000539746 NKTRP30414 1462 aaKnown RBP16.11■□□□□ 0.17
VTN-202ENST00000539746 KCNA6P17658 529 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms