RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
PROM1-219ENST00000539194 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
PROM1-219ENST00000539194 PIK3C2GO75747 1445 aa9.4□□□□□ -0.9
PROM1-219ENST00000539194 ASXL1Q8IXJ9 1541 aa9.4□□□□□ -0.91
PROM1-219ENST00000539194 ERVK-7P63135 1459 aa9.39□□□□□ -0.91
PROM1-219ENST00000539194 UGGT1Q9NYU2 1555 aa9.39□□□□□ -0.91
PROM1-219ENST00000539194 HECW2Q9P2P5 1572 aa9.39□□□□□ -0.91
PROM1-219ENST00000539194 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
PROM1-219ENST00000539194 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
PROM1-219ENST00000539194 STAC3Q96MF2 364 aa9.38□□□□□ -0.91
PROM1-219ENST00000539194 FANCAO15360 1455 aa9.38□□□□□ -0.91
PROM1-219ENST00000539194 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
PROM1-219ENST00000539194 ZNF326Q5BKZ1 582 aaKnown RBP9.37□□□□□ -0.91
PROM1-219ENST00000539194 KDM2AQ9Y2K7 1162 aa9.37□□□□□ -0.91
PROM1-219ENST00000539194 QRICH2Q9H0J4 1663 aa9.37□□□□□ -0.91
PROM1-219ENST00000539194 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
PROM1-219ENST00000539194 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
PROM1-219ENST00000539194 CFAP74Q9C0B2 1584 aa9.36□□□□□ -0.91
PROM1-219ENST00000539194 TRMT2AQ8IZ69 625 aaKnown RBP9.36□□□□□ -0.91
PROM1-219ENST00000539194 TMC1Q8TDI8 760 aa9.36□□□□□ -0.91
PROM1-219ENST00000539194 PLEKHH1Q9ULM0 1364 aa9.35□□□□□ -0.91
PROM1-219ENST00000539194 CAMSAP1Q5T5Y3 1602 aa9.35□□□□□ -0.91
PROM1-219ENST00000539194 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
PROM1-219ENST00000539194 PANK3Q9H999 370 aa9.34□□□□□ -0.91
PROM1-219ENST00000539194 IQSEC2Q5JU85 1478 aa9.33□□□□□ -0.92
PROM1-219ENST00000539194 RICTORQ6R327 1708 aa9.33□□□□□ -0.92
PROM1-219ENST00000539194 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
PROM1-219ENST00000539194 MLH3Q9UHC1 1453 aa9.33□□□□□ -0.92
PROM1-219ENST00000539194 CDCA7LQ96GN5 454 aa9.32□□□□□ -0.92
PROM1-219ENST00000539194 ADGRL1O94910 1474 aa9.32□□□□□ -0.92
PROM1-219ENST00000539194 CLTCQ00610 1675 aaKnown RBP9.32□□□□□ -0.92
PROM1-219ENST00000539194 ANKRD26Q9UPS8 1709 aa9.32□□□□□ -0.92
PROM1-219ENST00000539194 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
PROM1-219ENST00000539194 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
PROM1-219ENST00000539194 TMF1P82094 1093 aa9.31□□□□□ -0.92
PROM1-219ENST00000539194 ADGRB2O60241 1585 aa9.31□□□□□ -0.92
PROM1-219ENST00000539194 EXOC6Q8TAG9 804 aa9.31□□□□□ -0.92
PROM1-219ENST00000539194 ASXL2Q76L83 1435 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 PPP2R1AP30153 589 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 RGL3Q3MIN7 710 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 AFAP1Q8N556 730 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 ABCC3O15438 1527 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 PAK3O75914 559 aaPredicted RBP9.3□□□□□ -0.92
PROM1-219ENST00000539194 DUSP27Q5VZP5 1158 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 MYO5BQ9ULV0 1848 aa9.3□□□□□ -0.92
PROM1-219ENST00000539194 GLI2P10070 1586 aa9.29□□□□□ -0.92
PROM1-219ENST00000539194 SPAG9O60271 1321 aaKnown RBP9.29□□□□□ -0.92
PROM1-219ENST00000539194 POGZQ7Z3K3 1410 aa9.29□□□□□ -0.92
PROM1-219ENST00000539194 NOS1P29475 1434 aa9.29□□□□□ -0.92
PROM1-219ENST00000539194 NPATQ14207 1427 aa9.29□□□□□ -0.92
PROM1-219ENST00000539194 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
PROM1-219ENST00000539194 DIP2CQ9Y2E4 1556 aa9.28□□□□□ -0.92
PROM1-219ENST00000539194 ADAMTS8Q9UP79 889 aa9.28□□□□□ -0.92
PROM1-219ENST00000539194 TULP4Q9NRJ4 1543 aa9.27□□□□□ -0.92
PROM1-219ENST00000539194 MS4A1P11836 297 aa9.27□□□□□ -0.93
PROM1-219ENST00000539194 CCDC136Q96JN2 1154 aa9.27□□□□□ -0.93
PROM1-219ENST00000539194 CARD14Q9BXL6 1004 aa9.27□□□□□ -0.93
PROM1-219ENST00000539194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.93
PROM1-219ENST00000539194 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
PROM1-219ENST00000539194 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
PROM1-219ENST00000539194 IPO9Q96P70 1041 aaKnown RBP9.26□□□□□ -0.93
PROM1-219ENST00000539194 TMEM131LA2VDJ0 1609 aa9.26□□□□□ -0.93
PROM1-219ENST00000539194 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
PROM1-219ENST00000539194 ADGRF5Q8IZF2 1346 aa9.25□□□□□ -0.93
PROM1-219ENST00000539194 CC2D1BQ5T0F9 858 aaKnown RBP9.25□□□□□ -0.93
PROM1-219ENST00000539194 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
PROM1-219ENST00000539194 ARHGAP31Q2M1Z3 1444 aa9.25□□□□□ -0.93
PROM1-219ENST00000539194 PREX1Q8TCU6 1659 aa9.25□□□□□ -0.93
PROM1-219ENST00000539194 TCERG1O14776 1098 aaKnown RBP9.25□□□□□ -0.93
PROM1-219ENST00000539194 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
PROM1-219ENST00000539194 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
PROM1-219ENST00000539194 NOP58Q9Y2X3 529 aaKnown RBP9.24□□□□□ -0.93
PROM1-219ENST00000539194 SLFN5Q08AF3 891 aa9.24□□□□□ -0.93
PROM1-219ENST00000539194 C20orf194Q5TEA3 1177 aa9.24□□□□□ -0.93
PROM1-219ENST00000539194 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
PROM1-219ENST00000539194 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
PROM1-219ENST00000539194 NKTRP30414 1462 aaKnown RBP9.23□□□□□ -0.93
PROM1-219ENST00000539194 COL3A1P02461 1466 aaPredicted RBP9.23□□□□□ -0.93
PROM1-219ENST00000539194 NLRP1Q9C000 1473 aa9.23□□□□□ -0.93
PROM1-219ENST00000539194 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
PROM1-219ENST00000539194 KANK1Q14678 1352 aa9.22□□□□□ -0.93
PROM1-219ENST00000539194 NEO1Q92859 1461 aa9.22□□□□□ -0.93
PROM1-219ENST00000539194 CDC42BPGQ6DT37 1551 aa9.21□□□□□ -0.93
PROM1-219ENST00000539194 CRBNQ96SW2 442 aa9.21□□□□□ -0.94
PROM1-219ENST00000539194 CD163L1Q9NR16 1453 aa9.21□□□□□ -0.94
PROM1-219ENST00000539194 PDE4AP27815 886 aa9.21□□□□□ -0.94
PROM1-219ENST00000539194 REREQ9P2R6 1566 aa9.21□□□□□ -0.94
PROM1-219ENST00000539194 PLIN1O60240 522 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 NCBP3Q53F19 620 aaKnown RBP9.2□□□□□ -0.94
PROM1-219ENST00000539194 CDCA8Q53HL2 280 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 PUS7Q96PZ0 661 aaKnown RBP9.2□□□□□ -0.94
PROM1-219ENST00000539194 C14orf93Q9H972 538 aaKnown RBP9.2□□□□□ -0.94
PROM1-219ENST00000539194 MYT1LQ9UL68 1186 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 KIF20BQ96Q89 1820 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 RIMBP3CA6NJZ7 1639 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 RIMBP3BA6NNM3 1639 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 RIMBP3Q9UFD9 1639 aa9.2□□□□□ -0.94
PROM1-219ENST00000539194 PTPRMP28827 1452 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms