RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 FOXD4L1Q9NU39 408 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 RRP7AQ9Y3A4 280 aaKnown RBP8.55□□□□□ -1.04
SCAPER-203ENST00000538941 DDX49Q9Y6V7 483 aaKnown RBP8.55□□□□□ -1.04
SCAPER-203ENST00000538941 MCM4P33991 863 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 SLFN5Q08AF3 891 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 TROQ12816 1431 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-203ENST00000538941 C9orf84Q5VXU9 1444 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 C8orf34Q49A92 452 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 NBPF1Q3BBV0 1214 aa8.55□□□□□ -1.04
SCAPER-203ENST00000538941 PLEKHG5O94827 1062 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 GRPEL1Q9HAV7 217 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 PARD3Q8TEW0 1356 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 CHAF1AQ13111 956 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-203ENST00000538941 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 IQGAP2Q13576 1575 aa8.54□□□□□ -1.04
SCAPER-203ENST00000538941 DZIP1LQ8IYY4 767 aaKnown RBP8.54□□□□□ -1.04
SCAPER-203ENST00000538941 NKTRP30414 1462 aaKnown RBP8.53□□□□□ -1.04
SCAPER-203ENST00000538941 DUSP27Q5VZP5 1158 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 RUNDC1Q96C34 613 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 SPATA31E1Q6ZUB1 1445 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 KIAA2012Q0VF49 1180 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 KIF14Q15058 1648 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 ESPNB1AK53 854 aa8.53□□□□□ -1.04
SCAPER-203ENST00000538941 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
SCAPER-203ENST00000538941 URB2Q14146 1524 aaKnown RBP8.52□□□□□ -1.05
SCAPER-203ENST00000538941 PRG4Q92954 1404 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-203ENST00000538941 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-203ENST00000538941 CCDC173Q0VFZ6 552 aa8.52□□□□□ -1.05
SCAPER-203ENST00000538941 MAP7D2Q96T17 732 aa8.52□□□□□ -1.05
SCAPER-203ENST00000538941 ARID3AQ99856 593 aa8.52□□□□□ -1.05
SCAPER-203ENST00000538941 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
SCAPER-203ENST00000538941 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
SCAPER-203ENST00000538941 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
SCAPER-203ENST00000538941 MCCP23508 829 aa8.51□□□□□ -1.05
SCAPER-203ENST00000538941 SCAPERQ9BY12 1400 aa8.51□□□□□ -1.05
SCAPER-203ENST00000538941 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 KIF21AQ7Z4S6 1674 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 ST18O60284 1047 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 CLCN1P35523 988 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
SCAPER-203ENST00000538941 MTERF4Q7Z6M4 381 aaKnown RBP8.49□□□□□ -1.05
SCAPER-203ENST00000538941 ARHGEF12Q9NZN5 1544 aa8.49□□□□□ -1.05
SCAPER-203ENST00000538941 INSRP06213 1382 aa8.49□□□□□ -1.05
SCAPER-203ENST00000538941 ANKRD45Q5TZF3 282 aa8.49□□□□□ -1.05
SCAPER-203ENST00000538941 JPH4Q96JJ6 628 aa8.49□□□□□ -1.05
SCAPER-203ENST00000538941 CIZ1Q9ULV3 898 aaPredicted RBP8.49□□□□□ -1.05
SCAPER-203ENST00000538941 UHRF1BP1Q6BDS2 1440 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 NUCB2P80303 420 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 DNMT1P26358 1616 aaKnown RBP8.48□□□□□ -1.05
SCAPER-203ENST00000538941 PHF14O94880 888 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 TPRNQ4KMQ1 711 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
SCAPER-203ENST00000538941 EFCAB2Q5VUJ9 269 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 TBC1D32Q96NH3 1257 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 ZMYM4Q5VZL5 1548 aa8.48□□□□□ -1.05
SCAPER-203ENST00000538941 IGHDP01880 384 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
SCAPER-203ENST00000538941 R3HCC1Q9Y3T6 440 aaKnown RBP8.47□□□□□ -1.05
SCAPER-203ENST00000538941 KIF16BQ96L93 1317 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 PZPP20742 1482 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 SAMD9Q5K651 1589 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 DISP3Q9P2K9 1392 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 XRCC6P12956 609 aaKnown RBP eCLIP8.47□□□□□ -1.05
SCAPER-203ENST00000538941 KIAA1211Q6ZU35 1233 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 TCP11L2Q8N4U5 519 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 ZBTB7CA1YPR0 619 aa8.47□□□□□ -1.05
SCAPER-203ENST00000538941 MVPQ14764 893 aaKnown RBP8.47□□□□□ -1.05
SCAPER-203ENST00000538941 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.05
SCAPER-203ENST00000538941 WDR63Q8IWG1 891 aa8.46□□□□□ -1.05
SCAPER-203ENST00000538941 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
SCAPER-203ENST00000538941 LNPKQ9C0E8 428 aa8.46□□□□□ -1.06
SCAPER-203ENST00000538941 MCTP1Q6DN14 999 aa8.46□□□□□ -1.06
SCAPER-203ENST00000538941 ITSN2Q9NZM3 1697 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 SYNJ2O15056 1496 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 WWC1Q8IX03 1113 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 ZSCAN30Q86W11 494 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 RRAGDQ9NQL2 400 aaPredicted RBP8.45□□□□□ -1.06
SCAPER-203ENST00000538941 CCDC39Q9UFE4 941 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 KDM5BQ9UGL1 1544 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 KDM6BO15054 1643 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 CT47B1P0C2W7 299 aaPredicted RBP8.45□□□□□ -1.06
SCAPER-203ENST00000538941 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
SCAPER-203ENST00000538941 SPAG9O60271 1321 aaKnown RBP8.44□□□□□ -1.06
SCAPER-203ENST00000538941 KDM5CP41229 1560 aa8.44□□□□□ -1.06
SCAPER-203ENST00000538941 KIAA0586Q9BVV6 1533 aa8.44□□□□□ -1.06
SCAPER-203ENST00000538941 PDCL3Q9H2J4 239 aa8.44□□□□□ -1.06
SCAPER-203ENST00000538941 K7ELQ4 463 aaPredicted RBP8.44□□□□□ -1.06
SCAPER-203ENST00000538941 APBB1O00213 710 aa8.44□□□□□ -1.06
SCAPER-203ENST00000538941 PRAG1Q86YV5 1406 aa8.44□□□□□ -1.06
SCAPER-203ENST00000538941 PLEKHH1Q9ULM0 1364 aa8.43□□□□□ -1.06
SCAPER-203ENST00000538941 CDC45O75419 566 aa8.43□□□□□ -1.06
SCAPER-203ENST00000538941 RARSP54136 660 aaKnown RBP8.43□□□□□ -1.06
SCAPER-203ENST00000538941 CAVIN1Q6NZI2 390 aaKnown RBP8.43□□□□□ -1.06
SCAPER-203ENST00000538941 HDGFL2Q7Z4V5 671 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms