RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.69
ACTN1-205ENST00000538545 ADGRB3O60242 1522 aa19.38■□□□□ 0.69
ACTN1-205ENST00000538545 ARID4BQ4LE39 1312 aaPredicted RBP19.38■□□□□ 0.69
ACTN1-205ENST00000538545 TMF1P82094 1093 aa19.38■□□□□ 0.69
ACTN1-205ENST00000538545 TRAK1Q9UPV9 953 aa19.38■□□□□ 0.69
ACTN1-205ENST00000538545 PANK3Q9H999 370 aa19.37■□□□□ 0.69
ACTN1-205ENST00000538545 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
ACTN1-205ENST00000538545 LAMC1P11047 1609 aa19.36■□□□□ 0.69
ACTN1-205ENST00000538545 IFT172Q9UG01 1749 aa19.36■□□□□ 0.69
ACTN1-205ENST00000538545 IQGAP1P46940 1657 aa19.35■□□□□ 0.69
ACTN1-205ENST00000538545 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
ACTN1-205ENST00000538545 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
ACTN1-205ENST00000538545 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
ACTN1-205ENST00000538545 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
ACTN1-205ENST00000538545 MYOM2P54296 1465 aa19.32■□□□□ 0.68
ACTN1-205ENST00000538545 PER1O15534 1290 aaPredicted RBP19.32■□□□□ 0.68
ACTN1-205ENST00000538545 PPLO60437 1756 aa19.32■□□□□ 0.68
ACTN1-205ENST00000538545 SAFB2Q14151 953 aaKnown RBP eCLIP19.3■□□□□ 0.68
ACTN1-205ENST00000538545 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
ACTN1-205ENST00000538545 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
ACTN1-205ENST00000538545 PREX1Q8TCU6 1659 aa19.3■□□□□ 0.68
ACTN1-205ENST00000538545 ARHGAP31Q2M1Z3 1444 aa19.29■□□□□ 0.68
ACTN1-205ENST00000538545 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
ACTN1-205ENST00000538545 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
ACTN1-205ENST00000538545 PIK3C2GO75747 1445 aa19.28■□□□□ 0.68
ACTN1-205ENST00000538545 C14orf93Q9H972 538 aaKnown RBP19.28■□□□□ 0.68
ACTN1-205ENST00000538545 STK26Q9P289 416 aa19.28■□□□□ 0.68
ACTN1-205ENST00000538545 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.68
ACTN1-205ENST00000538545 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.68
ACTN1-205ENST00000538545 NRXN1Q9ULB1 1477 aa19.27■□□□□ 0.68
ACTN1-205ENST00000538545 TMC1Q8TDI8 760 aa19.26■□□□□ 0.67
ACTN1-205ENST00000538545 SLC52A1Q9NWF4 448 aa19.26■□□□□ 0.67
ACTN1-205ENST00000538545 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
ACTN1-205ENST00000538545 KIAA1210Q9ULL0 1709 aa19.24■□□□□ 0.67
ACTN1-205ENST00000538545 ERVK-7P63135 1459 aa19.24■□□□□ 0.67
ACTN1-205ENST00000538545 ARHGEF40Q8TER5 1519 aa19.24■□□□□ 0.67
ACTN1-205ENST00000538545 VGFO15240 615 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-205ENST00000538545 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
ACTN1-205ENST00000538545 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
ACTN1-205ENST00000538545 BCANQ96GW7 911 aa19.22■□□□□ 0.67
ACTN1-205ENST00000538545 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
ACTN1-205ENST00000538545 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
ACTN1-205ENST00000538545 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
ACTN1-205ENST00000538545 KTN1Q86UP2 1357 aaKnown RBP19.21■□□□□ 0.67
ACTN1-205ENST00000538545 TMEM131LA2VDJ0 1609 aa19.21■□□□□ 0.67
ACTN1-205ENST00000538545 AGLP35573 1532 aa19.21■□□□□ 0.67
ACTN1-205ENST00000538545 ADGRB1O14514 1584 aa19.2■□□□□ 0.66
ACTN1-205ENST00000538545 MYBBP1AQ9BQG0 1328 aaKnown RBP19.2■□□□□ 0.66
ACTN1-205ENST00000538545 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
ACTN1-205ENST00000538545 PNISRQ8TF01 805 aaKnown RBP19.2■□□□□ 0.66
ACTN1-205ENST00000538545 SALL2Q9Y467 1007 aaPredicted RBP19.19■□□□□ 0.66
ACTN1-205ENST00000538545 ZMYM3Q14202 1370 aa19.18■□□□□ 0.66
ACTN1-205ENST00000538545 REREQ9P2R6 1566 aa19.18■□□□□ 0.66
ACTN1-205ENST00000538545 RALBP1Q15311 655 aa19.18■□□□□ 0.66
ACTN1-205ENST00000538545 PARD3Q8TEW0 1356 aa19.17■□□□□ 0.66
ACTN1-205ENST00000538545 KNSTRNQ9Y448 316 aa19.17■□□□□ 0.66
ACTN1-205ENST00000538545 FKBP8Q14318 412 aa19.16■□□□□ 0.66
ACTN1-205ENST00000538545 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
ACTN1-205ENST00000538545 SLC12A5Q9H2X9 1139 aa19.15■□□□□ 0.66
ACTN1-205ENST00000538545 MYOM1P52179 1685 aa19.15■□□□□ 0.66
ACTN1-205ENST00000538545 CARD14Q9BXL6 1004 aa19.15■□□□□ 0.66
ACTN1-205ENST00000538545 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
ACTN1-205ENST00000538545 AMER1Q5JTC6 1135 aaPredicted RBP19.14■□□□□ 0.65
ACTN1-205ENST00000538545 ASXL1Q8IXJ9 1541 aa19.13■□□□□ 0.65
ACTN1-205ENST00000538545 SETBP1Q9Y6X0 1596 aa19.13■□□□□ 0.65
ACTN1-205ENST00000538545 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
ACTN1-205ENST00000538545 KDM5AP29375 1690 aaKnown RBP19.12■□□□□ 0.65
ACTN1-205ENST00000538545 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
ACTN1-205ENST00000538545 NLRP13Q86W25 1043 aa19.12■□□□□ 0.65
ACTN1-205ENST00000538545 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
ACTN1-205ENST00000538545 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
ACTN1-205ENST00000538545 MINK1Q8N4C8 1332 aaPredicted RBP19.1■□□□□ 0.65
ACTN1-205ENST00000538545 BRD4O60885 1362 aaPredicted RBP19.09■□□□□ 0.65
ACTN1-205ENST00000538545 PRAM1Q96QH2 718 aa19.09■□□□□ 0.65
ACTN1-205ENST00000538545 SPATA31D1Q6ZQQ2 1576 aa19.09■□□□□ 0.65
ACTN1-205ENST00000538545 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.64
ACTN1-205ENST00000538545 TNNT2P45379 298 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-205ENST00000538545 ARHGEF28Q8N1W1 1705 aaKnown RBP19.07■□□□□ 0.64
ACTN1-205ENST00000538545 WAPLQ7Z5K2 1190 aa19.07■□□□□ 0.64
ACTN1-205ENST00000538545 MYO3AQ8NEV4 1616 aa19.07■□□□□ 0.64
ACTN1-205ENST00000538545 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
ACTN1-205ENST00000538545 PPP2R1AP30153 589 aa19.06■□□□□ 0.64
ACTN1-205ENST00000538545 POGKQ9P215 609 aa19.05■□□□□ 0.64
ACTN1-205ENST00000538545 ALKQ9UM73 1620 aa19.04■□□□□ 0.64
ACTN1-205ENST00000538545 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
ACTN1-205ENST00000538545 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
ACTN1-205ENST00000538545 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
ACTN1-205ENST00000538545 YTHDC2Q9H6S0 1430 aaKnown RBP19.03■□□□□ 0.64
ACTN1-205ENST00000538545 LRPPRCP42704 1394 aaKnown RBP19.03■□□□□ 0.64
ACTN1-205ENST00000538545 TNRQ92752 1358 aa19.03■□□□□ 0.64
ACTN1-205ENST00000538545 TULP4Q9NRJ4 1543 aa19.03■□□□□ 0.64
ACTN1-205ENST00000538545 PTPRMP28827 1452 aa19.02■□□□□ 0.64
ACTN1-205ENST00000538545 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.63
ACTN1-205ENST00000538545 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
ACTN1-205ENST00000538545 EVC2Q86UK5 1308 aa19■□□□□ 0.63
ACTN1-205ENST00000538545 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
ACTN1-205ENST00000538545 METP08581 1390 aa18.99■□□□□ 0.63
ACTN1-205ENST00000538545 NEFLP07196 543 aa18.99■□□□□ 0.63
ACTN1-205ENST00000538545 TXNDC2Q86VQ3 553 aa18.99■□□□□ 0.63
ACTN1-205ENST00000538545 LTKP29376 864 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms