RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 FRMPD1Q5SYB0 1578 aa14.86□□□□□ -0.03
CLIP1-210ENST00000538120 NBPF1Q3BBV0 1214 aa14.86□□□□□ -0.03
CLIP1-210ENST00000538120 GPRASP1Q5JY77 1395 aa14.86□□□□□ -0.03
CLIP1-210ENST00000538120 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
CLIP1-210ENST00000538120 EIF5BO60841 1220 aaKnown RBP14.85□□□□□ -0.03
CLIP1-210ENST00000538120 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
CLIP1-210ENST00000538120 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
CLIP1-210ENST00000538120 CLTCL1P53675 1640 aa14.84□□□□□ -0.03
CLIP1-210ENST00000538120 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
CLIP1-210ENST00000538120 HECW2Q9P2P5 1572 aa14.84□□□□□ -0.03
CLIP1-210ENST00000538120 RAPGEF3O95398 923 aa14.84□□□□□ -0.03
CLIP1-210ENST00000538120 GLI2P10070 1586 aa14.83□□□□□ -0.04
CLIP1-210ENST00000538120 LMTK2Q8IWU2 1503 aa14.83□□□□□ -0.04
CLIP1-210ENST00000538120 RNF17Q9BXT8 1623 aaKnown RBP14.83□□□□□ -0.04
CLIP1-210ENST00000538120 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
CLIP1-210ENST00000538120 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
CLIP1-210ENST00000538120 EFCAB6Q5THR3 1501 aa14.81□□□□□ -0.04
CLIP1-210ENST00000538120 LAMC1P11047 1609 aa14.8□□□□□ -0.04
CLIP1-210ENST00000538120 CEP152O94986 1710 aa14.8□□□□□ -0.04
CLIP1-210ENST00000538120 PPRC1Q5VV67 1664 aaKnown RBP14.8□□□□□ -0.04
CLIP1-210ENST00000538120 CCDC184Q52MB2 194 aa14.79□□□□□ -0.04
CLIP1-210ENST00000538120 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.04
CLIP1-210ENST00000538120 MADDQ8WXG6 1647 aa14.77□□□□□ -0.04
CLIP1-210ENST00000538120 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.04
CLIP1-210ENST00000538120 UGGT1Q9NYU2 1555 aa14.77□□□□□ -0.04
CLIP1-210ENST00000538120 RICTORQ6R327 1708 aa14.77□□□□□ -0.05
CLIP1-210ENST00000538120 ANP32EQ9BTT0 268 aa14.76□□□□□ -0.05
CLIP1-210ENST00000538120 DIP2CQ9Y2E4 1556 aa14.76□□□□□ -0.05
CLIP1-210ENST00000538120 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
CLIP1-210ENST00000538120 DIP2BQ9P265 1576 aa14.75□□□□□ -0.05
CLIP1-210ENST00000538120 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
CLIP1-210ENST00000538120 GGT6Q6P531 493 aa14.75□□□□□ -0.05
CLIP1-210ENST00000538120 STAC3Q96MF2 364 aa14.75□□□□□ -0.05
CLIP1-210ENST00000538120 TESK2Q96S53 571 aa14.75□□□□□ -0.05
CLIP1-210ENST00000538120 NPATQ14207 1427 aa14.74□□□□□ -0.05
CLIP1-210ENST00000538120 YEATS2Q9ULM3 1422 aa14.74□□□□□ -0.05
CLIP1-210ENST00000538120 ABCC3O15438 1527 aa14.73□□□□□ -0.05
CLIP1-210ENST00000538120 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
CLIP1-210ENST00000538120 BCL11AQ9H165 835 aa14.72□□□□□ -0.05
CLIP1-210ENST00000538120 COL17A1Q9UMD9 1497 aaPredicted RBP14.7□□□□□ -0.06
CLIP1-210ENST00000538120 DISP3Q9P2K9 1392 aa14.7□□□□□ -0.06
CLIP1-210ENST00000538120 WASHC2CQ9Y4E1 1318 aa14.7□□□□□ -0.06
CLIP1-210ENST00000538120 MYOM2P54296 1465 aa14.69□□□□□ -0.06
CLIP1-210ENST00000538120 PODXL2Q9NZ53 605 aa14.69□□□□□ -0.06
CLIP1-210ENST00000538120 MROH2AA6NES4 1674 aa14.69□□□□□ -0.06
CLIP1-210ENST00000538120 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 ADGRB3O60242 1522 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 ZMYM4Q5VZL5 1548 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
CLIP1-210ENST00000538120 KIF1BO60333 1816 aa14.67□□□□□ -0.06
CLIP1-210ENST00000538120 NOS1P29475 1434 aa14.67□□□□□ -0.06
CLIP1-210ENST00000538120 CAMSAP1Q5T5Y3 1602 aa14.66□□□□□ -0.06
CLIP1-210ENST00000538120 NRXN1Q9ULB1 1477 aa14.66□□□□□ -0.06
CLIP1-210ENST00000538120 IFT172Q9UG01 1749 aa14.66□□□□□ -0.06
CLIP1-210ENST00000538120 SCAF11Q99590 1463 aaKnown RBP14.66□□□□□ -0.06
CLIP1-210ENST00000538120 HNRNPUQ00839 825 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLIP1-210ENST00000538120 KIAA1210Q9ULL0 1709 aa14.66□□□□□ -0.06
CLIP1-210ENST00000538120 SIGLEC1Q9BZZ2 1709 aa14.65□□□□□ -0.06
CLIP1-210ENST00000538120 NEFLP07196 543 aa14.65□□□□□ -0.06
CLIP1-210ENST00000538120 TMF1P82094 1093 aa14.65□□□□□ -0.06
CLIP1-210ENST00000538120 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
CLIP1-210ENST00000538120 CFAP70Q5T0N1 1121 aa14.65□□□□□ -0.06
CLIP1-210ENST00000538120 RBM19Q9Y4C8 960 aaKnown RBP14.65□□□□□ -0.06
CLIP1-210ENST00000538120 ARHGAP31Q2M1Z3 1444 aa14.64□□□□□ -0.07
CLIP1-210ENST00000538120 PER1O15534 1290 aaPredicted RBP14.64□□□□□ -0.07
CLIP1-210ENST00000538120 FAM9BQ8IZU0 186 aa14.64□□□□□ -0.07
CLIP1-210ENST00000538120 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
CLIP1-210ENST00000538120 TSPOAP1O95153 1857 aa14.63□□□□□ -0.07
CLIP1-210ENST00000538120 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
CLIP1-210ENST00000538120 SYNMO15061 1565 aa14.62□□□□□ -0.07
CLIP1-210ENST00000538120 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
CLIP1-210ENST00000538120 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
CLIP1-210ENST00000538120 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
CLIP1-210ENST00000538120 ZC3H13Q5T200 1668 aaKnown RBP14.61□□□□□ -0.07
CLIP1-210ENST00000538120 KTN1Q86UP2 1357 aaKnown RBP14.6□□□□□ -0.07
CLIP1-210ENST00000538120 RALBP1Q15311 655 aa14.59□□□□□ -0.07
CLIP1-210ENST00000538120 PROM2Q8N271 834 aa14.59□□□□□ -0.07
CLIP1-210ENST00000538120 PANK3Q9H999 370 aa14.59□□□□□ -0.07
CLIP1-210ENST00000538120 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
CLIP1-210ENST00000538120 PPLO60437 1756 aa14.58□□□□□ -0.07
CLIP1-210ENST00000538120 REREQ9P2R6 1566 aa14.58□□□□□ -0.08
CLIP1-210ENST00000538120 PIK3C2GO75747 1445 aa14.58□□□□□ -0.08
CLIP1-210ENST00000538120 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.08
CLIP1-210ENST00000538120 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
CLIP1-210ENST00000538120 MYBBP1AQ9BQG0 1328 aaKnown RBP14.57□□□□□ -0.08
CLIP1-210ENST00000538120 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
CLIP1-210ENST00000538120 IDI1Q13907 227 aa14.57□□□□□ -0.08
CLIP1-210ENST00000538120 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
CLIP1-210ENST00000538120 C14orf93Q9H972 538 aaKnown RBP14.57□□□□□ -0.08
CLIP1-210ENST00000538120 EIF3AQ14152 1382 aaKnown RBP14.56□□□□□ -0.08
CLIP1-210ENST00000538120 AGLP35573 1532 aa14.56□□□□□ -0.08
CLIP1-210ENST00000538120 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
CLIP1-210ENST00000538120 SETBP1Q9Y6X0 1596 aa14.55□□□□□ -0.08
CLIP1-210ENST00000538120 BRD4O60885 1362 aaPredicted RBP14.55□□□□□ -0.08
CLIP1-210ENST00000538120 NEXMIFQ5QGS0 1516 aa14.54□□□□□ -0.08
CLIP1-210ENST00000538120 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms