RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 SCAF11Q99590 1463 aaKnown RBP35.49■■■■□ 3.27
HDGF-210ENST00000537739 TMF1P82094 1093 aa35.48■■■■□ 3.27
HDGF-210ENST00000537739 KIAA1210Q9ULL0 1709 aa35.48■■■■□ 3.27
HDGF-210ENST00000537739 NRXN1Q9ULB1 1477 aa35.45■■■■□ 3.27
HDGF-210ENST00000537739 SYNMO15061 1565 aa35.44■■■■□ 3.26
HDGF-210ENST00000537739 PER1O15534 1290 aaPredicted RBP35.43■■■■□ 3.26
HDGF-210ENST00000537739 ARHGAP31Q2M1Z3 1444 aa35.43■■■■□ 3.26
HDGF-210ENST00000537739 KIF13AQ9H1H9 1805 aa35.42■■■■□ 3.26
HDGF-210ENST00000537739 ZC3H13Q5T200 1668 aaKnown RBP35.4■■■■□ 3.26
HDGF-210ENST00000537739 PIK3C2BO00750 1634 aa35.38■■■■□ 3.25
HDGF-210ENST00000537739 PPLO60437 1756 aa35.37■■■■□ 3.25
HDGF-210ENST00000537739 PANK3Q9H999 370 aa35.36■■■■□ 3.25
HDGF-210ENST00000537739 SUPT16HQ9Y5B9 1047 aaKnown RBP35.36■■■■□ 3.25
HDGF-210ENST00000537739 IDI1Q13907 227 aa35.34■■■■□ 3.25
HDGF-210ENST00000537739 RALBP1Q15311 655 aa35.32■■■■□ 3.24
HDGF-210ENST00000537739 RPGRIP1LQ68CZ1 1315 aa35.32■■■■□ 3.24
HDGF-210ENST00000537739 PIK3C2GO75747 1445 aa35.3■■■■□ 3.24
HDGF-210ENST00000537739 EIF3AQ14152 1382 aaKnown RBP35.3■■■■□ 3.24
HDGF-210ENST00000537739 KTN1Q86UP2 1357 aaKnown RBP35.29■■■■□ 3.24
HDGF-210ENST00000537739 C14orf93Q9H972 538 aaKnown RBP35.28■■■■□ 3.24
HDGF-210ENST00000537739 REREQ9P2R6 1566 aa35.28■■■■□ 3.24
HDGF-210ENST00000537739 NUTM2DQ5VT03 806 aaPredicted RBP35.28■■■■□ 3.24
HDGF-210ENST00000537739 MYBBP1AQ9BQG0 1328 aaKnown RBP35.28■■■■□ 3.24
HDGF-210ENST00000537739 FBXO31Q5XUX0 539 aaPredicted RBP35.27■■■■□ 3.24
HDGF-210ENST00000537739 PARD3Q8TEW0 1356 aa35.26■■■■□ 3.23
HDGF-210ENST00000537739 PNISRQ8TF01 805 aaKnown RBP35.25■■■■□ 3.23
HDGF-210ENST00000537739 PREX1Q8TCU6 1659 aa35.25■■■■□ 3.23
HDGF-210ENST00000537739 AGLP35573 1532 aa35.25■■■■□ 3.23
HDGF-210ENST00000537739 TMC1Q8TDI8 760 aa35.25■■■■□ 3.23
HDGF-210ENST00000537739 SLC52A1Q9NWF4 448 aa35.23■■■■□ 3.23
HDGF-210ENST00000537739 SETBP1Q9Y6X0 1596 aa35.22■■■■□ 3.23
HDGF-210ENST00000537739 NEXMIFQ5QGS0 1516 aa35.22■■■■□ 3.23
HDGF-210ENST00000537739 CC2D1BQ5T0F9 858 aaKnown RBP35.21■■■■□ 3.23
HDGF-210ENST00000537739 TMEM132EQ6IEE7 984 aa35.21■■■■□ 3.23
HDGF-210ENST00000537739 CDCA8Q53HL2 280 aa35.2■■■■□ 3.22
HDGF-210ENST00000537739 BRD4O60885 1362 aaPredicted RBP35.19■■■■□ 3.22
HDGF-210ENST00000537739 ADGRB1O14514 1584 aa35.18■■■■□ 3.22
HDGF-210ENST00000537739 ZBED9Q6R2W3 1325 aa35.17■■■■□ 3.22
HDGF-210ENST00000537739 TRAK1Q9UPV9 953 aa35.17■■■■□ 3.22
HDGF-210ENST00000537739 ERVK-7P63135 1459 aa35.16■■■■□ 3.22
HDGF-210ENST00000537739 VGFO15240 615 aaPredicted RBP35.16■■■■□ 3.22
HDGF-210ENST00000537739 MLECQ14165 292 aa35.16■■■■□ 3.22
HDGF-210ENST00000537739 MYO5BQ9ULV0 1848 aa35.15■■■■□ 3.22
HDGF-210ENST00000537739 FKBP8Q14318 412 aa35.13■■■■□ 3.22
HDGF-210ENST00000537739 PPP6R1Q9UPN7 881 aa35.13■■■■□ 3.22
HDGF-210ENST00000537739 TMEM131LA2VDJ0 1609 aa35.13■■■■□ 3.21
HDGF-210ENST00000537739 MYO3AQ8NEV4 1616 aa35.12■■■■□ 3.21
HDGF-210ENST00000537739 MYOM1P52179 1685 aa35.12■■■■□ 3.21
HDGF-210ENST00000537739 NLRP13Q86W25 1043 aa35.12■■■■□ 3.21
HDGF-210ENST00000537739 ARHGEF40Q8TER5 1519 aa35.11■■■■□ 3.21
HDGF-210ENST00000537739 CLTCQ00610 1675 aaKnown RBP35.11■■■■□ 3.21
HDGF-210ENST00000537739 CENPJQ9HC77 1338 aaPredicted RBP35.1■■■■□ 3.21
HDGF-210ENST00000537739 KDM5AP29375 1690 aaKnown RBP35.08■■■■□ 3.21
HDGF-210ENST00000537739 LRPPRCP42704 1394 aaKnown RBP35.08■■■■□ 3.21
HDGF-210ENST00000537739 SENP3Q9H4L4 574 aaPredicted RBP35.07■■■■□ 3.2
HDGF-210ENST00000537739 SBNO2Q9Y2G9 1366 aa35.06■■■■□ 3.2
HDGF-210ENST00000537739 SLC24A1O60721 1099 aa35.05■■■■□ 3.2
HDGF-210ENST00000537739 KNSTRNQ9Y448 316 aa35.05■■■■□ 3.2
HDGF-210ENST00000537739 ZFYVE9O95405 1425 aa35.05■■■■□ 3.2
HDGF-210ENST00000537739 SENP3-EIF4A1A0A087X0R7 540 aa35.05■■■■□ 3.2
HDGF-210ENST00000537739 AMER1Q5JTC6 1135 aaPredicted RBP35.05■■■■□ 3.2
HDGF-210ENST00000537739 QRICH2Q9H0J4 1663 aa34.98■■■■□ 3.19
HDGF-210ENST00000537739 NEFLP07196 543 aa34.97■■■■□ 3.19
HDGF-210ENST00000537739 BCANQ96GW7 911 aa34.97■■■■□ 3.19
HDGF-210ENST00000537739 SPATA31D1Q6ZQQ2 1576 aa34.95■■■■□ 3.19
HDGF-210ENST00000537739 ASXL1Q8IXJ9 1541 aa34.94■■■■□ 3.18
HDGF-210ENST00000537739 CARD14Q9BXL6 1004 aa34.94■■■■□ 3.18
HDGF-210ENST00000537739 STAG3Q9UJ98 1225 aa34.93■■■■□ 3.18
HDGF-210ENST00000537739 ARHGEF28Q8N1W1 1705 aaKnown RBP34.9■■■■□ 3.18
HDGF-210ENST00000537739 PPP2R1AP30153 589 aa34.89■■■■□ 3.18
HDGF-210ENST00000537739 ZMYM3Q14202 1370 aa34.89■■■■□ 3.18
HDGF-210ENST00000537739 STK26Q9P289 416 aa34.88■■■■□ 3.17
HDGF-210ENST00000537739 A2ML1A8K2U0 1454 aa34.87■■■■□ 3.17
HDGF-210ENST00000537739 NPC1L1Q9UHC9 1359 aa34.86■■■■□ 3.17
HDGF-210ENST00000537739 SLC12A5Q9H2X9 1139 aa34.84■■■■□ 3.17
HDGF-210ENST00000537739 ESF1Q9H501 851 aaKnown RBP34.84■■■■□ 3.17
HDGF-210ENST00000537739 SAFB2Q14151 953 aaKnown RBP eCLIP34.82■■■■□ 3.16
HDGF-210ENST00000537739 IRX6P78412 446 aaPredicted RBP34.82■■■■□ 3.16
HDGF-210ENST00000537739 SMG6Q86US8 1419 aaKnown RBP34.81■■■■□ 3.16
HDGF-210ENST00000537739 ALKQ9UM73 1620 aa34.8■■■■□ 3.16
HDGF-210ENST00000537739 TULP4Q9NRJ4 1543 aa34.79■■■■□ 3.16
HDGF-210ENST00000537739 RIMS2Q9UQ26 1411 aa34.77■■■■□ 3.16
HDGF-210ENST00000537739 YTHDC2Q9H6S0 1430 aaKnown RBP34.76■■■■□ 3.16
HDGF-210ENST00000537739 EVC2Q86UK5 1308 aa34.76■■■■□ 3.16
HDGF-210ENST00000537739 NUDCQ9Y266 331 aa34.75■■■■□ 3.15
HDGF-210ENST00000537739 PTPRMP28827 1452 aa34.75■■■■□ 3.15
HDGF-210ENST00000537739 CABP2Q9NPB3 220 aa34.73■■■■□ 3.15
HDGF-210ENST00000537739 SALL2Q9Y467 1007 aaPredicted RBP34.73■■■■□ 3.15
HDGF-210ENST00000537739 PUS7Q96PZ0 661 aaKnown RBP34.71■■■■□ 3.15
HDGF-210ENST00000537739 PRAM1Q96QH2 718 aa34.71■■■■□ 3.15
HDGF-210ENST00000537739 ADAMTS8Q9UP79 889 aa34.71■■■■□ 3.15
HDGF-210ENST00000537739 BLMP54132 1417 aaPredicted RBP34.71■■■■□ 3.15
HDGF-210ENST00000537739 NSD3Q9BZ95 1437 aa34.7■■■■□ 3.14
HDGF-210ENST00000537739 INSRP06213 1382 aa34.69■■■■□ 3.14
HDGF-210ENST00000537739 TNRQ92752 1358 aa34.66■■■■□ 3.14
HDGF-210ENST00000537739 MINK1Q8N4C8 1332 aaPredicted RBP34.65■■■■□ 3.14
HDGF-210ENST00000537739 POGKQ9P215 609 aa34.65■■■■□ 3.14
HDGF-210ENST00000537739 TRHP20396 242 aaPredicted RBP34.62■■■■□ 3.13
HDGF-210ENST00000537739 SETD1AO15047 1707 aaKnown RBP34.61■■■■□ 3.13
HDGF-210ENST00000537739 SRPK2P78362 688 aaKnown RBP34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms