RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ATP7AQ04656 1500 aa18.95■□□□□ 0.62
USP44-203ENST00000537435 FANCAO15360 1455 aa18.95■□□□□ 0.62
USP44-203ENST00000537435 SYNMO15061 1565 aa18.95■□□□□ 0.62
USP44-203ENST00000537435 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
USP44-203ENST00000537435 IPO9Q96P70 1041 aaKnown RBP18.94■□□□□ 0.62
USP44-203ENST00000537435 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
USP44-203ENST00000537435 EIF3AQ14152 1382 aaKnown RBP18.93■□□□□ 0.62
USP44-203ENST00000537435 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
USP44-203ENST00000537435 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
USP44-203ENST00000537435 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
USP44-203ENST00000537435 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
USP44-203ENST00000537435 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
USP44-203ENST00000537435 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
USP44-203ENST00000537435 ADGRL1O94910 1474 aa18.89■□□□□ 0.62
USP44-203ENST00000537435 CFAP70Q5T0N1 1121 aa18.89■□□□□ 0.61
USP44-203ENST00000537435 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
USP44-203ENST00000537435 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
USP44-203ENST00000537435 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
USP44-203ENST00000537435 UGGT1Q9NYU2 1555 aa18.87■□□□□ 0.61
USP44-203ENST00000537435 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
USP44-203ENST00000537435 NEURL4Q96JN8 1562 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 MYOM1P52179 1685 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 PDE4AP27815 886 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 ZNF521Q96K83 1311 aa18.86■□□□□ 0.61
USP44-203ENST00000537435 MS4A1P11836 297 aa18.85■□□□□ 0.61
USP44-203ENST00000537435 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
USP44-203ENST00000537435 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
USP44-203ENST00000537435 MYOM2P54296 1465 aa18.85■□□□□ 0.61
USP44-203ENST00000537435 GOLGA2Q08379 1002 aa18.84■□□□□ 0.61
USP44-203ENST00000537435 MAP3K4Q9Y6R4 1608 aa18.84■□□□□ 0.61
USP44-203ENST00000537435 KDM5AP29375 1690 aaKnown RBP18.83■□□□□ 0.6
USP44-203ENST00000537435 NBR1Q14596 966 aa18.83■□□□□ 0.6
USP44-203ENST00000537435 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
USP44-203ENST00000537435 BACH2Q9BYV9 841 aa18.83■□□□□ 0.6
USP44-203ENST00000537435 BCL11AQ9H165 835 aa18.83■□□□□ 0.6
USP44-203ENST00000537435 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
USP44-203ENST00000537435 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
USP44-203ENST00000537435 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
USP44-203ENST00000537435 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
USP44-203ENST00000537435 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
USP44-203ENST00000537435 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
USP44-203ENST00000537435 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
USP44-203ENST00000537435 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
USP44-203ENST00000537435 CARD14Q9BXL6 1004 aa18.79■□□□□ 0.6
USP44-203ENST00000537435 KIF1BO60333 1816 aa18.77■□□□□ 0.6
USP44-203ENST00000537435 APAF1O14727 1248 aa18.77■□□□□ 0.59
USP44-203ENST00000537435 KIDINS220Q9ULH0 1771 aa18.76■□□□□ 0.59
USP44-203ENST00000537435 PPRC1Q5VV67 1664 aaKnown RBP18.76■□□□□ 0.59
USP44-203ENST00000537435 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
USP44-203ENST00000537435 KDM2BQ8NHM5 1336 aa18.75■□□□□ 0.59
USP44-203ENST00000537435 MROH2AA6NES4 1674 aa18.75■□□□□ 0.59
USP44-203ENST00000537435 NRXN1Q9ULB1 1477 aa18.75■□□□□ 0.59
USP44-203ENST00000537435 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
USP44-203ENST00000537435 TRMT2AQ8IZ69 625 aaKnown RBP18.75■□□□□ 0.59
USP44-203ENST00000537435 NOS1P29475 1434 aa18.75■□□□□ 0.59
USP44-203ENST00000537435 LMTK2Q8IWU2 1503 aa18.74■□□□□ 0.59
USP44-203ENST00000537435 DEKP35659 375 aaKnown RBP18.74■□□□□ 0.59
USP44-203ENST00000537435 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
USP44-203ENST00000537435 IFT172Q9UG01 1749 aa18.74■□□□□ 0.59
USP44-203ENST00000537435 ZNF518AQ6AHZ1 1483 aa18.74■□□□□ 0.59
USP44-203ENST00000537435 SBNO2Q9Y2G9 1366 aa18.73■□□□□ 0.59
USP44-203ENST00000537435 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
USP44-203ENST00000537435 CENPQQ7L2Z9 268 aaPredicted RBP18.72■□□□□ 0.59
USP44-203ENST00000537435 ADGRB3O60242 1522 aa18.71■□□□□ 0.59
USP44-203ENST00000537435 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
USP44-203ENST00000537435 TRAK1Q9UPV9 953 aa18.7■□□□□ 0.58
USP44-203ENST00000537435 NKTRP30414 1462 aaKnown RBP18.7■□□□□ 0.58
USP44-203ENST00000537435 E9PSI1 815 aa18.69■□□□□ 0.58
USP44-203ENST00000537435 NPATQ14207 1427 aa18.69■□□□□ 0.58
USP44-203ENST00000537435 GGT6Q6P531 493 aa18.68■□□□□ 0.58
USP44-203ENST00000537435 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
USP44-203ENST00000537435 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
USP44-203ENST00000537435 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
USP44-203ENST00000537435 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
USP44-203ENST00000537435 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
USP44-203ENST00000537435 BCAR3O75815 825 aa18.66■□□□□ 0.58
USP44-203ENST00000537435 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
USP44-203ENST00000537435 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
USP44-203ENST00000537435 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
USP44-203ENST00000537435 POGZQ7Z3K3 1410 aa18.65■□□□□ 0.58
USP44-203ENST00000537435 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
USP44-203ENST00000537435 SLC12A5Q9H2X9 1139 aa18.65■□□□□ 0.58
USP44-203ENST00000537435 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.58
USP44-203ENST00000537435 FRMPD1Q5SYB0 1578 aa18.64■□□□□ 0.57
USP44-203ENST00000537435 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
USP44-203ENST00000537435 MLH3Q9UHC1 1453 aa18.63■□□□□ 0.57
USP44-203ENST00000537435 TNNT2P45379 298 aaPredicted RBP18.62■□□□□ 0.57
USP44-203ENST00000537435 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
USP44-203ENST00000537435 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
USP44-203ENST00000537435 RPGRIP1LQ68CZ1 1315 aa18.61■□□□□ 0.57
USP44-203ENST00000537435 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
USP44-203ENST00000537435 PPLO60437 1756 aa18.61■□□□□ 0.57
USP44-203ENST00000537435 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
USP44-203ENST00000537435 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
USP44-203ENST00000537435 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
USP44-203ENST00000537435 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
USP44-203ENST00000537435 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.57
USP44-203ENST00000537435 HECW2Q9P2P5 1572 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms