RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
LPCAT3-206ENST00000537179 MYO5BQ9ULV0 1848 aa24.47■■□□□ 1.51
LPCAT3-206ENST00000537179 CROCC2H7BZ55 1655 aa24.45■■□□□ 1.5
LPCAT3-206ENST00000537179 IDI1Q13907 227 aa24.43■■□□□ 1.5
LPCAT3-206ENST00000537179 ERBINQ96RT1 1412 aa24.43■■□□□ 1.5
LPCAT3-206ENST00000537179 AFF2P51816 1311 aa24.41■■□□□ 1.5
LPCAT3-206ENST00000537179 LMTK2Q8IWU2 1503 aa24.4■■□□□ 1.5
LPCAT3-206ENST00000537179 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
LPCAT3-206ENST00000537179 KIF15Q9NS87 1388 aa24.39■■□□□ 1.49
LPCAT3-206ENST00000537179 NUTM2BA6NNL0 878 aaPredicted RBP24.38■■□□□ 1.49
LPCAT3-206ENST00000537179 NUTM2EB1AL46 878 aaPredicted RBP24.38■■□□□ 1.49
LPCAT3-206ENST00000537179 NUTM2AQ8IVF1 878 aaPredicted RBP24.38■■□□□ 1.49
LPCAT3-206ENST00000537179 GCC2Q8IWJ2 1684 aa24.37■■□□□ 1.49
LPCAT3-206ENST00000537179 EP400Q96L91 3159 aa24.37■■□□□ 1.49
LPCAT3-206ENST00000537179 BCANQ96GW7 911 aa24.37■■□□□ 1.49
LPCAT3-206ENST00000537179 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
LPCAT3-206ENST00000537179 NOS1P29475 1434 aa24.36■■□□□ 1.49
LPCAT3-206ENST00000537179 NHSL1Q5SYE7 1610 aa24.36■■□□□ 1.49
LPCAT3-206ENST00000537179 SETBP1Q9Y6X0 1596 aa24.36■■□□□ 1.49
LPCAT3-206ENST00000537179 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
LPCAT3-206ENST00000537179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.35■■□□□ 1.49
LPCAT3-206ENST00000537179 KANK1Q14678 1352 aa24.33■■□□□ 1.49
LPCAT3-206ENST00000537179 C14orf37Q86TY3 774 aa24.32■■□□□ 1.48
LPCAT3-206ENST00000537179 MYOM3Q5VTT5 1437 aa24.32■■□□□ 1.48
LPCAT3-206ENST00000537179 NUTM2DQ5VT03 806 aaPredicted RBP24.31■■□□□ 1.48
LPCAT3-206ENST00000537179 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
LPCAT3-206ENST00000537179 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
LPCAT3-206ENST00000537179 RBM6P78332 1123 aaKnown RBP24.3■■□□□ 1.48
LPCAT3-206ENST00000537179 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
LPCAT3-206ENST00000537179 BRINP3Q76B58 766 aa24.29■■□□□ 1.48
LPCAT3-206ENST00000537179 TMEM131LA2VDJ0 1609 aa24.28■■□□□ 1.48
LPCAT3-206ENST00000537179 ATAD2Q6PL18 1390 aa24.28■■□□□ 1.48
LPCAT3-206ENST00000537179 ATF3P18847 181 aa24.27■■□□□ 1.48
LPCAT3-206ENST00000537179 C19orf44Q9H6X5 657 aa24.27■■□□□ 1.48
LPCAT3-206ENST00000537179 RIMS2Q9UQ26 1411 aa24.27■■□□□ 1.48
LPCAT3-206ENST00000537179 QTRT2Q9H974 415 aaKnown RBP24.26■■□□□ 1.47
LPCAT3-206ENST00000537179 C8orf37Q96NL8 207 aa24.25■■□□□ 1.47
LPCAT3-206ENST00000537179 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
LPCAT3-206ENST00000537179 ZRANB1Q9UGI0 708 aa24.25■■□□□ 1.47
LPCAT3-206ENST00000537179 ADAMTS13Q76LX8 1427 aa24.24■■□□□ 1.47
LPCAT3-206ENST00000537179 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
LPCAT3-206ENST00000537179 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
LPCAT3-206ENST00000537179 ABCC5O15440 1437 aa24.23■■□□□ 1.47
LPCAT3-206ENST00000537179 PPP1R15AO75807 674 aaPredicted RBP24.22■■□□□ 1.47
LPCAT3-206ENST00000537179 DCCP43146 1447 aa24.2■■□□□ 1.46
LPCAT3-206ENST00000537179 PNPLA6Q8IY17 1366 aa24.19■■□□□ 1.46
LPCAT3-206ENST00000537179 PIK3R4Q99570 1358 aa24.18■■□□□ 1.46
LPCAT3-206ENST00000537179 FOXD1Q16676 465 aa24.18■■□□□ 1.46
LPCAT3-206ENST00000537179 TRPM2O94759 1503 aa24.18■■□□□ 1.46
LPCAT3-206ENST00000537179 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
LPCAT3-206ENST00000537179 MST1RQ04912 1400 aa24.18■■□□□ 1.46
LPCAT3-206ENST00000537179 PTPN23Q9H3S7 1636 aa24.17■■□□□ 1.46
LPCAT3-206ENST00000537179 XRN1Q8IZH2 1706 aaKnown RBP24.16■■□□□ 1.46
LPCAT3-206ENST00000537179 NGLY1Q96IV0 654 aa24.16■■□□□ 1.46
LPCAT3-206ENST00000537179 DAPK1P53355 1430 aa24.16■■□□□ 1.46
LPCAT3-206ENST00000537179 PTPRUQ92729 1446 aa24.14■■□□□ 1.45
LPCAT3-206ENST00000537179 LRRC59Q96AG4 307 aaKnown RBP24.14■■□□□ 1.45
LPCAT3-206ENST00000537179 UNC13BO14795 1591 aa24.12■■□□□ 1.45
LPCAT3-206ENST00000537179 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
LPCAT3-206ENST00000537179 LRP5O75197 1615 aa24.11■■□□□ 1.45
LPCAT3-206ENST00000537179 NALCNQ8IZF0 1738 aa24.09■■□□□ 1.45
LPCAT3-206ENST00000537179 ADAMTS2O95450 1211 aa24.08■■□□□ 1.45
LPCAT3-206ENST00000537179 KANK4Q5T7N3 995 aaPredicted RBP24.08■■□□□ 1.45
LPCAT3-206ENST00000537179 DDX17Q92841 729 aaKnown RBP24.08■■□□□ 1.45
LPCAT3-206ENST00000537179 LAMC1P11047 1609 aa24.08■■□□□ 1.45
LPCAT3-206ENST00000537179 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
LPCAT3-206ENST00000537179 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.07■■□□□ 1.44
LPCAT3-206ENST00000537179 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
LPCAT3-206ENST00000537179 ANKRD30AQ9BXX3 1397 aa24.06■■□□□ 1.44
LPCAT3-206ENST00000537179 ATRNO75882 1429 aa24.05■■□□□ 1.44
LPCAT3-206ENST00000537179 VPS8Q8N3P4 1428 aa24.04■■□□□ 1.44
LPCAT3-206ENST00000537179 USP21Q9UK80 565 aa24.04■■□□□ 1.44
LPCAT3-206ENST00000537179 TRPC5Q9UL62 973 aaPredicted RBP24.04■■□□□ 1.44
LPCAT3-206ENST00000537179 E9PCH4 1651 aa24.02■■□□□ 1.44
LPCAT3-206ENST00000537179 MARF1Q9Y4F3 1742 aaKnown RBP24.01■■□□□ 1.43
LPCAT3-206ENST00000537179 CCDC125Q86Z20 511 aa24.01■■□□□ 1.43
LPCAT3-206ENST00000537179 COL22A1Q8NFW1 1626 aaPredicted RBP24.01■■□□□ 1.43
LPCAT3-206ENST00000537179 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
LPCAT3-206ENST00000537179 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
LPCAT3-206ENST00000537179 PTCH1Q13635 1447 aa24■■□□□ 1.43
LPCAT3-206ENST00000537179 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
LPCAT3-206ENST00000537179 ADGRL2O95490 1459 aa23.97■■□□□ 1.43
LPCAT3-206ENST00000537179 FNBP4Q8N3X1 1017 aaPredicted RBP23.97■■□□□ 1.43
LPCAT3-206ENST00000537179 BRWD3Q6RI45 1802 aa23.94■■□□□ 1.42
LPCAT3-206ENST00000537179 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
LPCAT3-206ENST00000537179 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
LPCAT3-206ENST00000537179 C1orf167Q5SNV9 1468 aa23.93■■□□□ 1.42
LPCAT3-206ENST00000537179 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
LPCAT3-206ENST00000537179 BCL9LQ86UU0 1499 aa23.91■■□□□ 1.42
LPCAT3-206ENST00000537179 SPHKAPQ2M3C7 1700 aa23.9■■□□□ 1.42
LPCAT3-206ENST00000537179 ANKRD50Q9ULJ7 1429 aa23.9■■□□□ 1.42
LPCAT3-206ENST00000537179 SOS2Q07890 1332 aaPredicted RBP23.89■■□□□ 1.42
LPCAT3-206ENST00000537179 MYOM2P54296 1465 aa23.88■■□□□ 1.41
LPCAT3-206ENST00000537179 METP08581 1390 aa23.88■■□□□ 1.41
LPCAT3-206ENST00000537179 GLI3P10071 1580 aa23.87■■□□□ 1.41
LPCAT3-206ENST00000537179 DEFB132Q7Z7B7 95 aa23.85■■□□□ 1.41
LPCAT3-206ENST00000537179 GJD4Q96KN9 370 aaPredicted RBP23.81■■□□□ 1.4
LPCAT3-206ENST00000537179 ORAI2Q96SN7 254 aa23.8■■□□□ 1.4
LPCAT3-206ENST00000537179 RALGAPBQ86X10 1494 aa23.8■■□□□ 1.4
LPCAT3-206ENST00000537179 PXDNQ92626 1479 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms