RNA–Protein interactions for RNA: ENST00000536727.5

CADM1-204, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CADM1, Length 3,520 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-204ENST00000536727 ARHGEF12Q9NZN5 1544 aa17.09■□□□□ 0.33
CADM1-204ENST00000536727 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.33
CADM1-204ENST00000536727 EIF3AQ14152 1382 aaKnown RBP17.08■□□□□ 0.32
CADM1-204ENST00000536727 PCDHB15Q9Y5E8 787 aa17.07■□□□□ 0.32
CADM1-204ENST00000536727 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CADM1-204ENST00000536727 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
CADM1-204ENST00000536727 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
CADM1-204ENST00000536727 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
CADM1-204ENST00000536727 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
CADM1-204ENST00000536727 COL17A1Q9UMD9 1497 aaPredicted RBP17.06■□□□□ 0.32
CADM1-204ENST00000536727 TBC1D32Q96NH3 1257 aa17.06■□□□□ 0.32
CADM1-204ENST00000536727 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
CADM1-204ENST00000536727 CHMP5Q9NZZ3 219 aa17.05■□□□□ 0.32
CADM1-204ENST00000536727 HSCBQ8IWL3 235 aa17.05■□□□□ 0.32
CADM1-204ENST00000536727 CLCN1P35523 988 aa17.05■□□□□ 0.32
CADM1-204ENST00000536727 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
CADM1-204ENST00000536727 CDCA8Q53HL2 280 aa17.04■□□□□ 0.32
CADM1-204ENST00000536727 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
CADM1-204ENST00000536727 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
CADM1-204ENST00000536727 RLBP1P12271 317 aa17.03■□□□□ 0.32
CADM1-204ENST00000536727 MRE11P49959 708 aa17.03■□□□□ 0.32
CADM1-204ENST00000536727 GRPEL1Q9HAV7 217 aa17.03■□□□□ 0.32
CADM1-204ENST00000536727 ESPNB1AK53 854 aa17.02■□□□□ 0.32
CADM1-204ENST00000536727 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
CADM1-204ENST00000536727 ADGRL2O95490 1459 aa17.02■□□□□ 0.31
CADM1-204ENST00000536727 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
CADM1-204ENST00000536727 E9PCH4 1651 aa17■□□□□ 0.31
CADM1-204ENST00000536727 ARID3AQ99856 593 aa17■□□□□ 0.31
CADM1-204ENST00000536727 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
CADM1-204ENST00000536727 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
CADM1-204ENST00000536727 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
CADM1-204ENST00000536727 RRP9O43818 475 aaKnown RBP16.99■□□□□ 0.31
CADM1-204ENST00000536727 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
CADM1-204ENST00000536727 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
CADM1-204ENST00000536727 TRMT2AQ8IZ69 625 aaKnown RBP16.98■□□□□ 0.31
CADM1-204ENST00000536727 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
CADM1-204ENST00000536727 A2MP01023 1474 aa16.98■□□□□ 0.31
CADM1-204ENST00000536727 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
CADM1-204ENST00000536727 INSRP06213 1382 aa16.97■□□□□ 0.31
CADM1-204ENST00000536727 RARSP54136 660 aaKnown RBP16.97■□□□□ 0.31
CADM1-204ENST00000536727 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
CADM1-204ENST00000536727 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
CADM1-204ENST00000536727 NCLP19338 710 aaKnown RBP16.95■□□□□ 0.3
CADM1-204ENST00000536727 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
CADM1-204ENST00000536727 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
CADM1-204ENST00000536727 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
CADM1-204ENST00000536727 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
CADM1-204ENST00000536727 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
CADM1-204ENST00000536727 FAM135AQ9P2D6 1515 aa16.94■□□□□ 0.3
CADM1-204ENST00000536727 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
CADM1-204ENST00000536727 KIAA0556O60303 1618 aa16.94■□□□□ 0.3
CADM1-204ENST00000536727 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
CADM1-204ENST00000536727 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
CADM1-204ENST00000536727 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
CADM1-204ENST00000536727 ITSN2Q9NZM3 1697 aa16.93■□□□□ 0.3
CADM1-204ENST00000536727 PBRM1Q86U86 1689 aa16.93■□□□□ 0.3
CADM1-204ENST00000536727 RBM10P98175 930 aaKnown RBP16.92■□□□□ 0.3
CADM1-204ENST00000536727 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
CADM1-204ENST00000536727 TRPM1Q7Z4N2 1603 aa16.91■□□□□ 0.3
CADM1-204ENST00000536727 SENP3Q9H4L4 574 aaPredicted RBP16.91■□□□□ 0.3
CADM1-204ENST00000536727 GAS2L3Q86XJ1 694 aa16.9■□□□□ 0.3
CADM1-204ENST00000536727 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
CADM1-204ENST00000536727 TNPO1Q92973 898 aaKnown RBP16.9■□□□□ 0.3
CADM1-204ENST00000536727 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
CADM1-204ENST00000536727 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
CADM1-204ENST00000536727 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
CADM1-204ENST00000536727 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
CADM1-204ENST00000536727 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
CADM1-204ENST00000536727 WDR7Q9Y4E6 1490 aa16.89■□□□□ 0.29
CADM1-204ENST00000536727 DZIP1LQ8IYY4 767 aaKnown RBP16.89■□□□□ 0.29
CADM1-204ENST00000536727 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
CADM1-204ENST00000536727 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■□□ 18.2
CADM1-204ENST00000536727 ZKSCAN2Q63HK3 967 aa16.89■□□□□ 0.29
CADM1-204ENST00000536727 MSNP26038 577 aaKnown RBP16.88■□□□□ 0.29
CADM1-204ENST00000536727 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
CADM1-204ENST00000536727 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 ASXL1Q8IXJ9 1541 aa16.87■□□□□ 0.29
CADM1-204ENST00000536727 FAM13BQ9NYF5 915 aa16.86■□□□□ 0.29
CADM1-204ENST00000536727 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
CADM1-204ENST00000536727 PIK3C2GO75747 1445 aa16.85■□□□□ 0.29
CADM1-204ENST00000536727 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
CADM1-204ENST00000536727 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
CADM1-204ENST00000536727 PTPRGP23470 1445 aa16.85■□□□□ 0.29
CADM1-204ENST00000536727 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
CADM1-204ENST00000536727 GOLGA6L22H0YM25 854 aa16.84■□□□□ 0.29
CADM1-204ENST00000536727 PRDM15P57071 1507 aaPredicted RBP16.84■□□□□ 0.29
CADM1-204ENST00000536727 NASPP49321 788 aaPredicted RBP16.84■□□□□ 0.29
CADM1-204ENST00000536727 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
CADM1-204ENST00000536727 MTHFSP49914 203 aa16.83■□□□□ 0.28
CADM1-204ENST00000536727 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
CADM1-204ENST00000536727 CROCC2H7BZ55 1655 aa16.83■□□□□ 0.28
CADM1-204ENST00000536727 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
CADM1-204ENST00000536727 EXOSC9Q06265 439 aaKnown RBP16.82■□□□□ 0.28
CADM1-204ENST00000536727 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
CADM1-204ENST00000536727 SLC12A5Q9H2X9 1139 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms