RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CROCC2H7BZ55 1655 aa8.4□□□□□ -1.07
CHD4-205ENST00000536301 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.07
CHD4-205ENST00000536301 ABCC5O15440 1437 aa8.39□□□□□ -1.07
CHD4-205ENST00000536301 NOS1P29475 1434 aa8.39□□□□□ -1.07
CHD4-205ENST00000536301 RGS12O14924 1447 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 ZFYVE9O95405 1425 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 FGD6Q6ZV73 1430 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
CHD4-205ENST00000536301 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
CHD4-205ENST00000536301 RXRBP28702 533 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 ZNF772Q68DY9 489 aaPredicted RBP8.38□□□□□ -1.07
CHD4-205ENST00000536301 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
CHD4-205ENST00000536301 LMTK2Q8IWU2 1503 aa8.38□□□□□ -1.07
CHD4-205ENST00000536301 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
CHD4-205ENST00000536301 ERBINQ96RT1 1412 aa8.37□□□□□ -1.07
CHD4-205ENST00000536301 GCC2Q8IWJ2 1684 aa8.37□□□□□ -1.07
CHD4-205ENST00000536301 AFF2P51816 1311 aa8.37□□□□□ -1.07
CHD4-205ENST00000536301 BCANQ96GW7 911 aa8.37□□□□□ -1.07
CHD4-205ENST00000536301 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
CHD4-205ENST00000536301 CDK12Q9NYV4 1490 aaPredicted RBP8.36□□□□□ -1.07
CHD4-205ENST00000536301 ADAMTS13Q76LX8 1427 aa8.36□□□□□ -1.07
CHD4-205ENST00000536301 RIMS2Q9UQ26 1411 aa8.36□□□□□ -1.07
CHD4-205ENST00000536301 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
CHD4-205ENST00000536301 BRINP3Q76B58 766 aa8.35□□□□□ -1.07
CHD4-205ENST00000536301 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
CHD4-205ENST00000536301 TMEM131LA2VDJ0 1609 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 PTPN23Q9H3S7 1636 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 DDX17Q92841 729 aaKnown RBP8.34□□□□□ -1.07
CHD4-205ENST00000536301 CHIC2Q9UKJ5 165 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 DAPK1P53355 1430 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 SETBP1Q9Y6X0 1596 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 KANK1Q14678 1352 aa8.34□□□□□ -1.07
CHD4-205ENST00000536301 ASXL1Q8IXJ9 1541 aa8.33□□□□□ -1.08
CHD4-205ENST00000536301 NHSL1Q5SYE7 1610 aa8.32□□□□□ -1.08
CHD4-205ENST00000536301 VPS8Q8N3P4 1428 aa8.32□□□□□ -1.08
CHD4-205ENST00000536301 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
CHD4-205ENST00000536301 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
CHD4-205ENST00000536301 EP400Q96L91 3159 aa8.32□□□□□ -1.08
CHD4-205ENST00000536301 SETD5Q9C0A6 1442 aa8.31□□□□□ -1.08
CHD4-205ENST00000536301 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
CHD4-205ENST00000536301 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
CHD4-205ENST00000536301 CADPS2Q86UW7 1296 aa8.31□□□□□ -1.08
CHD4-205ENST00000536301 C19orf44Q9H6X5 657 aa8.31□□□□□ -1.08
CHD4-205ENST00000536301 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
CHD4-205ENST00000536301 SLC52A1Q9NWF4 448 aa8.31□□□□□ -1.08
CHD4-205ENST00000536301 MST1RQ04912 1400 aa8.3□□□□□ -1.08
CHD4-205ENST00000536301 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
CHD4-205ENST00000536301 ATF3P18847 181 aa8.3□□□□□ -1.08
CHD4-205ENST00000536301 RBM6P78332 1123 aaKnown RBP8.3□□□□□ -1.08
CHD4-205ENST00000536301 PNPLA6Q8IY17 1366 aa8.3□□□□□ -1.08
CHD4-205ENST00000536301 NRXN3Q9Y4C0 1643 aa8.29□□□□□ -1.08
CHD4-205ENST00000536301 XRN1Q8IZH2 1706 aaKnown RBP8.29□□□□□ -1.08
CHD4-205ENST00000536301 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
CHD4-205ENST00000536301 UNC13BO14795 1591 aa8.29□□□□□ -1.08
CHD4-205ENST00000536301 ANKRD30AQ9BXX3 1397 aa8.28□□□□□ -1.08
CHD4-205ENST00000536301 ADAMTS2O95450 1211 aa8.28□□□□□ -1.08
CHD4-205ENST00000536301 TRPM2O94759 1503 aa8.28□□□□□ -1.08
CHD4-205ENST00000536301 E9PCH4 1651 aa8.27□□□□□ -1.08
CHD4-205ENST00000536301 RPRD2Q5VT52 1461 aaKnown RBP8.27□□□□□ -1.09
CHD4-205ENST00000536301 NALCNQ8IZF0 1738 aa8.27□□□□□ -1.09
CHD4-205ENST00000536301 PIK3R4Q99570 1358 aa8.26□□□□□ -1.09
CHD4-205ENST00000536301 LOC105371045A0A1W2PR82 267 aa8.26□□□□□ -1.09
CHD4-205ENST00000536301 DCCP43146 1447 aa8.26□□□□□ -1.09
CHD4-205ENST00000536301 ADGRL2O95490 1459 aa8.26□□□□□ -1.09
CHD4-205ENST00000536301 ATAD2Q6PL18 1390 aa8.25□□□□□ -1.09
CHD4-205ENST00000536301 LRRC59Q96AG4 307 aaKnown RBP8.25□□□□□ -1.09
CHD4-205ENST00000536301 NGLY1Q96IV0 654 aa8.25□□□□□ -1.09
CHD4-205ENST00000536301 METP08581 1390 aa8.24□□□□□ -1.09
CHD4-205ENST00000536301 ATRNO75882 1429 aa8.24□□□□□ -1.09
CHD4-205ENST00000536301 ANKRD50Q9ULJ7 1429 aa8.24□□□□□ -1.09
CHD4-205ENST00000536301 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.24□□□□□ -1.09
CHD4-205ENST00000536301 ZRANB1Q9UGI0 708 aa8.24□□□□□ -1.09
CHD4-205ENST00000536301 USP21Q9UK80 565 aa8.24□□□□□ -1.09
CHD4-205ENST00000536301 ADGRL3Q9HAR2 1447 aa8.23□□□□□ -1.09
CHD4-205ENST00000536301 HDGFP51858 240 aaKnown RBP8.23□□□□□ -1.09
CHD4-205ENST00000536301 LAMC1P11047 1609 aa8.22□□□□□ -1.09
CHD4-205ENST00000536301 C1orf167Q5SNV9 1468 aa8.22□□□□□ -1.09
CHD4-205ENST00000536301 ORAI2Q96SN7 254 aa8.22□□□□□ -1.09
CHD4-205ENST00000536301 BRWD3Q6RI45 1802 aa8.22□□□□□ -1.09
CHD4-205ENST00000536301 DEFB132Q7Z7B7 95 aa8.21□□□□□ -1.1
CHD4-205ENST00000536301 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.1
CHD4-205ENST00000536301 TRPC5Q9UL62 973 aaPredicted RBP8.21□□□□□ -1.1
CHD4-205ENST00000536301 BCL9LQ86UU0 1499 aa8.2□□□□□ -1.1
CHD4-205ENST00000536301 IQGAP3Q86VI3 1631 aa8.2□□□□□ -1.1
CHD4-205ENST00000536301 COL22A1Q8NFW1 1626 aaPredicted RBP8.2□□□□□ -1.1
CHD4-205ENST00000536301 SOS2Q07890 1332 aaPredicted RBP8.2□□□□□ -1.1
CHD4-205ENST00000536301 MARF1Q9Y4F3 1742 aaKnown RBP8.2□□□□□ -1.1
CHD4-205ENST00000536301 MYOM2P54296 1465 aa8.19□□□□□ -1.1
CHD4-205ENST00000536301 GLI3P10071 1580 aa8.19□□□□□ -1.1
CHD4-205ENST00000536301 FAM50AQ14320 339 aaKnown RBP8.19□□□□□ -1.1
CHD4-205ENST00000536301 PTCH1Q13635 1447 aa8.19□□□□□ -1.1
CHD4-205ENST00000536301 ROBO2Q9HCK4 1378 aa8.18□□□□□ -1.1
CHD4-205ENST00000536301 NEXMIFQ5QGS0 1516 aa8.18□□□□□ -1.1
CHD4-205ENST00000536301 LRP5O75197 1615 aa8.18□□□□□ -1.1
CHD4-205ENST00000536301 SPHKAPQ2M3C7 1700 aa8.17□□□□□ -1.1
CHD4-205ENST00000536301 XPCQ01831 940 aaPredicted RBP8.17□□□□□ -1.1
CHD4-205ENST00000536301 CLTCL1P53675 1640 aa8.16□□□□□ -1.1
CHD4-205ENST00000536301 RALGAPBQ86X10 1494 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms