RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DCBLD2Q96PD2 775 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 ADGBQ8N7X0 1667 aa5.04□□□□□ -1.6
MCF2-210ENST00000536274 LTBP4Q8N2S1 1624 aa5.03□□□□□ -1.6
MCF2-210ENST00000536274 UBTFP17480 764 aaKnown RBP5.03□□□□□ -1.6
MCF2-210ENST00000536274 CCDC184Q52MB2 194 aa5.03□□□□□ -1.6
MCF2-210ENST00000536274 CHMP4BQ9H444 224 aaKnown RBP5.03□□□□□ -1.6
MCF2-210ENST00000536274 CEP162Q5TB80 1403 aa5.03□□□□□ -1.6
MCF2-210ENST00000536274 FMN1Q68DA7 1419 aa5.03□□□□□ -1.6
MCF2-210ENST00000536274 YEATS2Q9ULM3 1422 aa5.03□□□□□ -1.6
MCF2-210ENST00000536274 INO80Q9ULG1 1556 aaPredicted RBP5.03□□□□□ -1.6
MCF2-210ENST00000536274 PLEKHH2Q8IVE3 1493 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 SYNMO15061 1565 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 DHX57Q6P158 1386 aaKnown RBP5.02□□□□□ -1.61
MCF2-210ENST00000536274 ABCA6Q8N139 1617 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 NFKBIBQ15653 356 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 ZC3H13Q5T200 1668 aaKnown RBP5.02□□□□□ -1.61
MCF2-210ENST00000536274 KDM5AP29375 1690 aaKnown RBP5.02□□□□□ -1.61
MCF2-210ENST00000536274 ANP32CO43423 234 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 KLHL34Q8N239 644 aa5.02□□□□□ -1.61
MCF2-210ENST00000536274 DEPDC5O75140 1603 aa5.01□□□□□ -1.61
MCF2-210ENST00000536274 POLR1AO95602 1720 aaPredicted RBP5.01□□□□□ -1.61
MCF2-210ENST00000536274 CDC42BPBQ9Y5S2 1711 aa5.01□□□□□ -1.61
MCF2-210ENST00000536274 HSP90AA1P07900 732 aaKnown RBP5.01□□□□□ -1.61
MCF2-210ENST00000536274 FAM43AQ8N2R8 423 aa5.01□□□□□ -1.61
MCF2-210ENST00000536274 SGIP1Q9BQI5 828 aa5.01□□□□□ -1.61
MCF2-210ENST00000536274 PPP1R15AO75807 674 aaPredicted RBP5□□□□□ -1.61
MCF2-210ENST00000536274 MYO3AQ8NEV4 1616 aa5□□□□□ -1.61
MCF2-210ENST00000536274 CPS1P31327 1500 aa5□□□□□ -1.61
MCF2-210ENST00000536274 FRAT2O75474 233 aaPredicted RBP5□□□□□ -1.61
MCF2-210ENST00000536274 FAM9BQ8IZU0 186 aa5□□□□□ -1.61
MCF2-210ENST00000536274 NCOA1Q15788 1441 aa5□□□□□ -1.61
MCF2-210ENST00000536274 KIDINS220Q9ULH0 1771 aa5□□□□□ -1.61
MCF2-210ENST00000536274 TROQ12816 1431 aaPredicted RBP5□□□□□ -1.61
MCF2-210ENST00000536274 UHRF1BP1Q6BDS2 1440 aa5□□□□□ -1.61
MCF2-210ENST00000536274 CDC42BPAQ5VT25 1732 aa5□□□□□ -1.61
MCF2-210ENST00000536274 PRDM4Q9UKN5 801 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 CLIP1P30622 1438 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 PKD2Q13563 968 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 BBXQ8WY36 941 aaPredicted RBP4.99□□□□□ -1.61
MCF2-210ENST00000536274 ZHX1Q9UKY1 873 aaPredicted RBP4.99□□□□□ -1.61
MCF2-210ENST00000536274 KIAA1107Q9UPP5 1409 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 EIF2AK4Q9P2K8 1649 aaKnown RBP4.99□□□□□ -1.61
MCF2-210ENST00000536274 LRRIQ1Q96JM4 1722 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 USP35Q9P2H5 1018 aa4.99□□□□□ -1.61
MCF2-210ENST00000536274 TCOF1Q13428 1488 aaKnown RBP4.99□□□□□ -1.61
MCF2-210ENST00000536274 FYCO1Q9BQS8 1478 aa4.98□□□□□ -1.61
MCF2-210ENST00000536274 FAM212AQ96EL1 285 aa4.98□□□□□ -1.61
MCF2-210ENST00000536274 CAMSAP2Q08AD1 1489 aa4.98□□□□□ -1.61
MCF2-210ENST00000536274 PRDM10Q9NQV6 1147 aa4.98□□□□□ -1.61
MCF2-210ENST00000536274 TRAPPC8Q9Y2L5 1435 aa4.97□□□□□ -1.61
MCF2-210ENST00000536274 MAST1Q9Y2H9 1570 aa4.97□□□□□ -1.61
MCF2-210ENST00000536274 RNF17Q9BXT8 1623 aaKnown RBP4.97□□□□□ -1.61
MCF2-210ENST00000536274 VGLL3A8MV65 326 aa4.97□□□□□ -1.61
MCF2-210ENST00000536274 POGKQ9P215 609 aa4.97□□□□□ -1.61
MCF2-210ENST00000536274 NAP1L2Q9ULW6 460 aaPredicted RBP4.97□□□□□ -1.61
MCF2-210ENST00000536274 SAMD9LQ8IVG5 1584 aa4.97□□□□□ -1.61
MCF2-210ENST00000536274 SUPT6HQ7KZ85 1726 aaKnown RBP4.97□□□□□ -1.61
MCF2-210ENST00000536274 RRP9O43818 475 aaKnown RBP4.96□□□□□ -1.61
MCF2-210ENST00000536274 MAMSTRQ6ZN01 415 aa4.96□□□□□ -1.61
MCF2-210ENST00000536274 RTEL1-TNFRSF6BF6WH68 1400 aa4.96□□□□□ -1.61
MCF2-210ENST00000536274 KDM5DQ9BY66 1539 aa4.96□□□□□ -1.61
MCF2-210ENST00000536274 CEP170BQ9Y4F5 1589 aaPredicted RBP4.96□□□□□ -1.61
MCF2-210ENST00000536274 SOCS7O14512 581 aa4.96□□□□□ -1.62
MCF2-210ENST00000536274 CASKIN1Q8WXD9 1431 aa4.96□□□□□ -1.62
MCF2-210ENST00000536274 HOMEZQ8IX15 550 aa4.96□□□□□ -1.62
MCF2-210ENST00000536274 CERKQ8TCT0 537 aa4.96□□□□□ -1.62
MCF2-210ENST00000536274 PNNQ9H307 717 aaKnown RBP4.96□□□□□ -1.62
MCF2-210ENST00000536274 MED14O60244 1454 aa4.95□□□□□ -1.62
MCF2-210ENST00000536274 PPM1GO15355 546 aaPredicted RBP4.95□□□□□ -1.62
MCF2-210ENST00000536274 PDE4AP27815 886 aa4.95□□□□□ -1.62
MCF2-210ENST00000536274 GTF2E1P29083 439 aaPredicted RBP4.95□□□□□ -1.62
MCF2-210ENST00000536274 PANK2Q9BZ23 570 aa4.95□□□□□ -1.62
MCF2-210ENST00000536274 ARHGEF5Q12774 1597 aa4.95□□□□□ -1.62
MCF2-210ENST00000536274 CCER2I3L3R5 266 aa4.95□□□□□ -1.62
MCF2-210ENST00000536274 SCAPERQ9BY12 1400 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 MNX1P50219 401 aaPredicted RBP4.94□□□□□ -1.62
MCF2-210ENST00000536274 IFNLR1Q8IU57 520 aaPredicted RBP4.94□□□□□ -1.62
MCF2-210ENST00000536274 SLC39A7Q92504 469 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 ATP7AQ04656 1500 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 A2ML1A8K2U0 1454 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 ARHGAP5Q13017 1502 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 EVX2Q03828 476 aa4.94□□□□□ -1.62
MCF2-210ENST00000536274 PLEKHD1A6NEE1 506 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 TMEM132AQ24JP5 1023 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 DHX37Q8IY37 1157 aaKnown RBP4.93□□□□□ -1.62
MCF2-210ENST00000536274 EHBP1L1Q8N3D4 1523 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 NLRP1Q9C000 1473 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 GZF1Q9H116 711 aaPredicted RBP4.93□□□□□ -1.62
MCF2-210ENST00000536274 ARHGAP35Q9NRY4 1499 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 C7P10643 843 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 CAMSAP1Q5T5Y3 1602 aa4.93□□□□□ -1.62
MCF2-210ENST00000536274 NEURL4Q96JN8 1562 aa4.92□□□□□ -1.62
MCF2-210ENST00000536274 EFCAB2Q5VUJ9 269 aa4.92□□□□□ -1.62
MCF2-210ENST00000536274 CLTCQ00610 1675 aaKnown RBP4.92□□□□□ -1.62
MCF2-210ENST00000536274 CDK13Q14004 1512 aaKnown RBP4.92□□□□□ -1.62
MCF2-210ENST00000536274 TIE1P35590 1138 aa4.92□□□□□ -1.62
MCF2-210ENST00000536274 STAC3Q96MF2 364 aa4.92□□□□□ -1.62
MCF2-210ENST00000536274 DNMT1P26358 1616 aaKnown RBP4.92□□□□□ -1.62
MCF2-210ENST00000536274 LHX8Q68G74 356 aa4.92□□□□□ -1.62
MCF2-210ENST00000536274 NCOA2Q15596 1464 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms