RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
LINC00943-203ENST00000535544 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
LINC00943-203ENST00000535544 DIP2BQ9P265 1576 aa12.53□□□□□ -0.4
LINC00943-203ENST00000535544 ABCC3O15438 1527 aa12.53□□□□□ -0.4
LINC00943-203ENST00000535544 KIF1BO60333 1816 aa12.53□□□□□ -0.4
LINC00943-203ENST00000535544 TMF1P82094 1093 aa12.53□□□□□ -0.4
LINC00943-203ENST00000535544 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
LINC00943-203ENST00000535544 TMC1Q8TDI8 760 aa12.52□□□□□ -0.4
LINC00943-203ENST00000535544 LMTK2Q8IWU2 1503 aa12.51□□□□□ -0.41
LINC00943-203ENST00000535544 SAFB2Q14151 953 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00943-203ENST00000535544 IQGAP1P46940 1657 aa12.49□□□□□ -0.41
LINC00943-203ENST00000535544 SCAF11Q99590 1463 aaKnown RBP12.48□□□□□ -0.41
LINC00943-203ENST00000535544 SYNMO15061 1565 aa12.48□□□□□ -0.41
LINC00943-203ENST00000535544 GLI2P10070 1586 aa12.48□□□□□ -0.41
LINC00943-203ENST00000535544 LAMC1P11047 1609 aa12.48□□□□□ -0.41
LINC00943-203ENST00000535544 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
LINC00943-203ENST00000535544 MYBBP1AQ9BQG0 1328 aaKnown RBP12.47□□□□□ -0.41
LINC00943-203ENST00000535544 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.41
LINC00943-203ENST00000535544 IFT172Q9UG01 1749 aa12.46□□□□□ -0.41
LINC00943-203ENST00000535544 ADGRB3O60242 1522 aa12.46□□□□□ -0.41
LINC00943-203ENST00000535544 STK26Q9P289 416 aa12.46□□□□□ -0.42
LINC00943-203ENST00000535544 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
LINC00943-203ENST00000535544 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
LINC00943-203ENST00000535544 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
LINC00943-203ENST00000535544 RALBP1Q15311 655 aa12.44□□□□□ -0.42
LINC00943-203ENST00000535544 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
LINC00943-203ENST00000535544 KTN1Q86UP2 1357 aaKnown RBP12.44□□□□□ -0.42
LINC00943-203ENST00000535544 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
LINC00943-203ENST00000535544 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
LINC00943-203ENST00000535544 PPLO60437 1756 aa12.43□□□□□ -0.42
LINC00943-203ENST00000535544 MYOM2P54296 1465 aa12.43□□□□□ -0.42
LINC00943-203ENST00000535544 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
LINC00943-203ENST00000535544 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
LINC00943-203ENST00000535544 ERVK-7P63135 1459 aa12.42□□□□□ -0.42
LINC00943-203ENST00000535544 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
LINC00943-203ENST00000535544 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
LINC00943-203ENST00000535544 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
LINC00943-203ENST00000535544 KNSTRNQ9Y448 316 aa12.42□□□□□ -0.42
LINC00943-203ENST00000535544 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
LINC00943-203ENST00000535544 BRD4O60885 1362 aaPredicted RBP12.4□□□□□ -0.42
LINC00943-203ENST00000535544 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
LINC00943-203ENST00000535544 LRPPRCP42704 1394 aaKnown RBP12.39□□□□□ -0.43
LINC00943-203ENST00000535544 MYOM1P52179 1685 aa12.39□□□□□ -0.43
LINC00943-203ENST00000535544 PIK3C2BO00750 1634 aa12.39□□□□□ -0.43
LINC00943-203ENST00000535544 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
LINC00943-203ENST00000535544 NEFLP07196 543 aa12.39□□□□□ -0.43
LINC00943-203ENST00000535544 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
LINC00943-203ENST00000535544 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 NEXMIFQ5QGS0 1516 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 KIAA1210Q9ULL0 1709 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 VGFO15240 615 aaPredicted RBP12.38□□□□□ -0.43
LINC00943-203ENST00000535544 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 NEURL4Q96JN8 1562 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
LINC00943-203ENST00000535544 ARHGAP31Q2M1Z3 1444 aa12.37□□□□□ -0.43
LINC00943-203ENST00000535544 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
LINC00943-203ENST00000535544 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
LINC00943-203ENST00000535544 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
LINC00943-203ENST00000535544 EIF3AQ14152 1382 aaKnown RBP12.37□□□□□ -0.43
LINC00943-203ENST00000535544 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
LINC00943-203ENST00000535544 RPGRIP1LQ68CZ1 1315 aa12.35□□□□□ -0.43
LINC00943-203ENST00000535544 TMEM131LA2VDJ0 1609 aa12.34□□□□□ -0.43
LINC00943-203ENST00000535544 MINK1Q8N4C8 1332 aaPredicted RBP12.34□□□□□ -0.43
LINC00943-203ENST00000535544 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
LINC00943-203ENST00000535544 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.43
LINC00943-203ENST00000535544 CCDC146Q8IYE0 955 aa12.33□□□□□ -0.44
LINC00943-203ENST00000535544 KDM5AP29375 1690 aaKnown RBP12.33□□□□□ -0.44
LINC00943-203ENST00000535544 ASXL1Q8IXJ9 1541 aa12.33□□□□□ -0.44
LINC00943-203ENST00000535544 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
LINC00943-203ENST00000535544 NUDCQ9Y266 331 aa12.32□□□□□ -0.44
LINC00943-203ENST00000535544 QRICH2Q9H0J4 1663 aa12.32□□□□□ -0.44
LINC00943-203ENST00000535544 ZC3H13Q5T200 1668 aaKnown RBP12.31□□□□□ -0.44
LINC00943-203ENST00000535544 ZMYM3Q14202 1370 aa12.31□□□□□ -0.44
LINC00943-203ENST00000535544 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
LINC00943-203ENST00000535544 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
LINC00943-203ENST00000535544 SETBP1Q9Y6X0 1596 aa12.31□□□□□ -0.44
LINC00943-203ENST00000535544 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
LINC00943-203ENST00000535544 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
LINC00943-203ENST00000535544 NSD3Q9BZ95 1437 aa12.29□□□□□ -0.44
LINC00943-203ENST00000535544 TULP4Q9NRJ4 1543 aa12.29□□□□□ -0.44
LINC00943-203ENST00000535544 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
LINC00943-203ENST00000535544 FBLN1P23142 703 aa12.29□□□□□ -0.44
LINC00943-203ENST00000535544 MYO3AQ8NEV4 1616 aa12.28□□□□□ -0.44
LINC00943-203ENST00000535544 PLEKHH1Q9ULM0 1364 aa12.28□□□□□ -0.44
LINC00943-203ENST00000535544 SRPK2P78362 688 aaKnown RBP12.28□□□□□ -0.44
LINC00943-203ENST00000535544 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
LINC00943-203ENST00000535544 A2ML1A8K2U0 1454 aa12.28□□□□□ -0.44
LINC00943-203ENST00000535544 POGKQ9P215 609 aa12.28□□□□□ -0.44
LINC00943-203ENST00000535544 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.44
LINC00943-203ENST00000535544 AGLP35573 1532 aa12.27□□□□□ -0.45
LINC00943-203ENST00000535544 SBNO2Q9Y2G9 1366 aa12.27□□□□□ -0.45
LINC00943-203ENST00000535544 PLIN1O60240 522 aa12.26□□□□□ -0.45
LINC00943-203ENST00000535544 PTPRMP28827 1452 aa12.26□□□□□ -0.45
LINC00943-203ENST00000535544 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
LINC00943-203ENST00000535544 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
LINC00943-203ENST00000535544 TXNDC2Q86VQ3 553 aa12.25□□□□□ -0.45
LINC00943-203ENST00000535544 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms