RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
VAMP1-204ENST00000535180 RBM6P78332 1123 aaKnown RBP17.49■□□□□ 0.39
VAMP1-204ENST00000535180 NUTM2DQ5VT03 806 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-204ENST00000535180 NUTM2AQ8IVF1 878 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-204ENST00000535180 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
VAMP1-204ENST00000535180 CEP162Q5TB80 1403 aa17.47■□□□□ 0.39
VAMP1-204ENST00000535180 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
VAMP1-204ENST00000535180 QTRT2Q9H974 415 aaKnown RBP17.46■□□□□ 0.39
VAMP1-204ENST00000535180 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
VAMP1-204ENST00000535180 MAST1Q9Y2H9 1570 aa17.45■□□□□ 0.38
VAMP1-204ENST00000535180 NCOA3Q9Y6Q9 1424 aa17.45■□□□□ 0.38
VAMP1-204ENST00000535180 IDI1Q13907 227 aa17.41■□□□□ 0.38
VAMP1-204ENST00000535180 CADPS2Q86UW7 1296 aa17.41■□□□□ 0.38
VAMP1-204ENST00000535180 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
VAMP1-204ENST00000535180 EP400Q96L91 3159 aa17.39■□□□□ 0.37
VAMP1-204ENST00000535180 BCANQ96GW7 911 aa17.39■□□□□ 0.37
VAMP1-204ENST00000535180 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
VAMP1-204ENST00000535180 C8orf37Q96NL8 207 aa17.38■□□□□ 0.37
VAMP1-204ENST00000535180 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
VAMP1-204ENST00000535180 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
VAMP1-204ENST00000535180 ATF3P18847 181 aa17.37■□□□□ 0.37
VAMP1-204ENST00000535180 DUOX2Q9NRD8 1548 aa17.37■□□□□ 0.37
VAMP1-204ENST00000535180 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 BRINP3Q76B58 766 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 ADGRB3O60242 1522 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 LRP5O75197 1615 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
VAMP1-204ENST00000535180 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
VAMP1-204ENST00000535180 LRRC59Q96AG4 307 aaKnown RBP17.32■□□□□ 0.36
VAMP1-204ENST00000535180 ASXL1Q8IXJ9 1541 aa17.31■□□□□ 0.36
VAMP1-204ENST00000535180 TBX22Q9Y458 520 aa17.3■□□□□ 0.36
VAMP1-204ENST00000535180 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
VAMP1-204ENST00000535180 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
VAMP1-204ENST00000535180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.27■□□□□ 0.36
VAMP1-204ENST00000535180 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.36
VAMP1-204ENST00000535180 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.36
VAMP1-204ENST00000535180 NOS1P29475 1434 aa17.27■□□□□ 0.35
VAMP1-204ENST00000535180 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
VAMP1-204ENST00000535180 KANK1Q14678 1352 aa17.27■□□□□ 0.35
VAMP1-204ENST00000535180 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
VAMP1-204ENST00000535180 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
VAMP1-204ENST00000535180 DCCP43146 1447 aa17.25■□□□□ 0.35
VAMP1-204ENST00000535180 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
VAMP1-204ENST00000535180 USP21Q9UK80 565 aa17.25■□□□□ 0.35
VAMP1-204ENST00000535180 GCC2Q8IWJ2 1684 aa17.25■□□□□ 0.35
VAMP1-204ENST00000535180 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
VAMP1-204ENST00000535180 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
VAMP1-204ENST00000535180 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
VAMP1-204ENST00000535180 MST1RQ04912 1400 aa17.22■□□□□ 0.35
VAMP1-204ENST00000535180 KIF15Q9NS87 1388 aa17.22■□□□□ 0.35
VAMP1-204ENST00000535180 ATRNO75882 1429 aa17.21■□□□□ 0.35
VAMP1-204ENST00000535180 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
VAMP1-204ENST00000535180 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
VAMP1-204ENST00000535180 FNBP4Q8N3X1 1017 aaPredicted RBP17.2■□□□□ 0.34
VAMP1-204ENST00000535180 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
VAMP1-204ENST00000535180 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
VAMP1-204ENST00000535180 DDX17Q92841 729 aaKnown RBP17.18■□□□□ 0.34
VAMP1-204ENST00000535180 TRPM2O94759 1503 aa17.17■□□□□ 0.34
VAMP1-204ENST00000535180 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
VAMP1-204ENST00000535180 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
VAMP1-204ENST00000535180 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
VAMP1-204ENST00000535180 PTCH1Q13635 1447 aa17.16■□□□□ 0.34
VAMP1-204ENST00000535180 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.16■□□□□ 0.34
VAMP1-204ENST00000535180 LAMC1P11047 1609 aa17.16■□□□□ 0.34
VAMP1-204ENST00000535180 MARF1Q9Y4F3 1742 aaKnown RBP17.16■□□□□ 0.34
VAMP1-204ENST00000535180 BRWD3Q6RI45 1802 aa17.15■□□□□ 0.34
VAMP1-204ENST00000535180 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
VAMP1-204ENST00000535180 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
VAMP1-204ENST00000535180 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
VAMP1-204ENST00000535180 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
VAMP1-204ENST00000535180 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
VAMP1-204ENST00000535180 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
VAMP1-204ENST00000535180 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
VAMP1-204ENST00000535180 UNC13BO14795 1591 aa17.11■□□□□ 0.33
VAMP1-204ENST00000535180 HRCP23327 699 aa17.1■□□□□ 0.33
VAMP1-204ENST00000535180 GJD4Q96KN9 370 aaPredicted RBP17.1■□□□□ 0.33
VAMP1-204ENST00000535180 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
VAMP1-204ENST00000535180 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
VAMP1-204ENST00000535180 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
VAMP1-204ENST00000535180 ABCC5O15440 1437 aa17.08■□□□□ 0.32
VAMP1-204ENST00000535180 SOS2Q07890 1332 aaPredicted RBP17.08■□□□□ 0.32
VAMP1-204ENST00000535180 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
VAMP1-204ENST00000535180 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
VAMP1-204ENST00000535180 YY1P25490 414 aa17.06■□□□□ 0.32
VAMP1-204ENST00000535180 GLI3P10071 1580 aa17.05■□□□□ 0.32
VAMP1-204ENST00000535180 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
VAMP1-204ENST00000535180 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
VAMP1-204ENST00000535180 CHGAP10645 457 aaKnown RBP17.04■□□□□ 0.32
VAMP1-204ENST00000535180 MYOM2P54296 1465 aa17.02■□□□□ 0.32
VAMP1-204ENST00000535180 DAPK1P53355 1430 aa17.01■□□□□ 0.31
VAMP1-204ENST00000535180 ANKRD30AQ9BXX3 1397 aa17.01■□□□□ 0.31
VAMP1-204ENST00000535180 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
VAMP1-204ENST00000535180 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
VAMP1-204ENST00000535180 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
VAMP1-204ENST00000535180 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
VAMP1-204ENST00000535180 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
VAMP1-204ENST00000535180 BAG6P46379 1132 aa16.96■□□□□ 0.31
VAMP1-204ENST00000535180 METP08581 1390 aa16.96■□□□□ 0.31
VAMP1-204ENST00000535180 E9PCH4 1651 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms