RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 CEP170BQ9Y4F5 1589 aaPredicted RBP7.79□□□□□ -1.16
NPIPB3-206ENST00000534903 TRPM2O94759 1503 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 LMTK2Q8IWU2 1503 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 SPHKAPQ2M3C7 1700 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 KANK1Q14678 1352 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 A2ML1A8K2U0 1454 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 E9PCH4 1651 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 ZNF142P52746 1687 aaPredicted RBP7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 EFCAB6Q5THR3 1501 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 CCDC144AA2RUR9 1427 aa7.78□□□□□ -1.16
NPIPB3-206ENST00000534903 CHRDL2Q6WN34 429 aa7.77□□□□□ -1.17
NPIPB3-206ENST00000534903 ANKLE2Q86XL3 938 aa7.77□□□□□ -1.17
NPIPB3-206ENST00000534903 ZC3H13Q5T200 1668 aaKnown RBP7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 NEURL4Q96JN8 1562 aa7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 RALGAPBQ86X10 1494 aa7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 L3MBTL2Q969R5 705 aa7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 MYO3AQ8NEV4 1616 aa7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 ALKQ9UM73 1620 aa7.76□□□□□ -1.17
NPIPB3-206ENST00000534903 CEP152O94986 1710 aa7.75□□□□□ -1.17
NPIPB3-206ENST00000534903 POTEAQ6S8J7 498 aa7.75□□□□□ -1.17
NPIPB3-206ENST00000534903 ZNF219Q9P2Y4 722 aaPredicted RBP7.75□□□□□ -1.17
NPIPB3-206ENST00000534903 SLC4A2P04920 1241 aa7.74□□□□□ -1.17
NPIPB3-206ENST00000534903 THEMISQ8N1K5 641 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-206ENST00000534903 POLR1AO95602 1720 aaPredicted RBP7.74□□□□□ -1.17
NPIPB3-206ENST00000534903 MED14O60244 1454 aa7.74□□□□□ -1.17
NPIPB3-206ENST00000534903 GGT6Q6P531 493 aa7.73□□□□□ -1.17
NPIPB3-206ENST00000534903 SP7Q8TDD2 431 aaPredicted RBP7.73□□□□□ -1.17
NPIPB3-206ENST00000534903 LAMC1P11047 1609 aa7.73□□□□□ -1.17
NPIPB3-206ENST00000534903 CLTCL1P53675 1640 aa7.73□□□□□ -1.17
NPIPB3-206ENST00000534903 ABCC3O15438 1527 aa7.73□□□□□ -1.17
NPIPB3-206ENST00000534903 NPHP4O75161 1426 aaPredicted RBP7.72□□□□□ -1.17
NPIPB3-206ENST00000534903 TRPM1Q7Z4N2 1603 aa7.72□□□□□ -1.17
NPIPB3-206ENST00000534903 LRRC7Q96NW7 1537 aa7.72□□□□□ -1.17
NPIPB3-206ENST00000534903 TNRQ92752 1358 aa7.71□□□□□ -1.17
NPIPB3-206ENST00000534903 FAM135BQ49AJ0 1406 aa7.71□□□□□ -1.17
NPIPB3-206ENST00000534903 SPATA31E1Q6ZUB1 1445 aa7.71□□□□□ -1.17
NPIPB3-206ENST00000534903 PRAG1Q86YV5 1406 aa7.71□□□□□ -1.17
NPIPB3-206ENST00000534903 KIF3BO15066 747 aa7.71□□□□□ -1.18
NPIPB3-206ENST00000534903 RBM42Q9BTD8 480 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-206ENST00000534903 EIF4G2P78344 907 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPIPB3-206ENST00000534903 NBPF8Q3BBV2 869 aa7.7□□□□□ -1.18
NPIPB3-206ENST00000534903 UPF1Q92900 1129 aaKnown RBP eCLIP7.7□□□□□ -1.18
NPIPB3-206ENST00000534903 ADGRB3O60242 1522 aa7.69□□□□□ -1.18
NPIPB3-206ENST00000534903 ARHGAP31Q2M1Z3 1444 aa7.69□□□□□ -1.18
NPIPB3-206ENST00000534903 KIF1BO60333 1816 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 NLRP1Q9C000 1473 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 CLTCQ00610 1675 aaKnown RBP7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 HSPA5P11021 654 aaKnown RBP7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 FBXO31Q5XUX0 539 aaPredicted RBP7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 STAC3Q96MF2 364 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 GPRASP1Q5JY77 1395 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 USP47Q96K76 1375 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 MYOM2P54296 1465 aa7.68□□□□□ -1.18
NPIPB3-206ENST00000534903 PIK3C2BO00750 1634 aa7.67□□□□□ -1.18
NPIPB3-206ENST00000534903 KIAA1210Q9ULL0 1709 aa7.67□□□□□ -1.18
NPIPB3-206ENST00000534903 SYNMO15061 1565 aa7.67□□□□□ -1.18
NPIPB3-206ENST00000534903 NOS1P29475 1434 aa7.66□□□□□ -1.18
NPIPB3-206ENST00000534903 UGGT1Q9NYU2 1555 aa7.66□□□□□ -1.18
NPIPB3-206ENST00000534903 ROCK2O75116 1388 aaKnown RBP7.65□□□□□ -1.18
NPIPB3-206ENST00000534903 MIER1Q8N108 512 aa7.65□□□□□ -1.18
NPIPB3-206ENST00000534903 DCAF11Q8TEB1 546 aa7.65□□□□□ -1.18
NPIPB3-206ENST00000534903 IQGAP1P46940 1657 aa7.64□□□□□ -1.19
NPIPB3-206ENST00000534903 CCDC7Q96M83 1385 aa7.64□□□□□ -1.19
NPIPB3-206ENST00000534903 WASHC2CQ9Y4E1 1318 aa7.64□□□□□ -1.19
NPIPB3-206ENST00000534903 ZNF772Q68DY9 489 aaPredicted RBP7.64□□□□□ -1.19
NPIPB3-206ENST00000534903 PPLO60437 1756 aa7.64□□□□□ -1.19
NPIPB3-206ENST00000534903 NRXN1Q9ULB1 1477 aa7.63□□□□□ -1.19
NPIPB3-206ENST00000534903 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
NPIPB3-206ENST00000534903 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
NPIPB3-206ENST00000534903 CARD11Q9BXL7 1154 aa7.63□□□□□ -1.19
NPIPB3-206ENST00000534903 JCADQ9P266 1359 aa7.62□□□□□ -1.19
NPIPB3-206ENST00000534903 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
NPIPB3-206ENST00000534903 HIRIP3Q9BW71 556 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-206ENST00000534903 ERVK-7P63135 1459 aa7.62□□□□□ -1.19
NPIPB3-206ENST00000534903 SRCAPQ6ZRS2 3230 aa7.61□□□□□ -1.19
NPIPB3-206ENST00000534903 RGL3Q3MIN7 710 aa7.61□□□□□ -1.19
NPIPB3-206ENST00000534903 KDM2AQ9Y2K7 1162 aa7.61□□□□□ -1.19
NPIPB3-206ENST00000534903 SETBP1Q9Y6X0 1596 aa7.61□□□□□ -1.19
NPIPB3-206ENST00000534903 KIF7Q2M1P5 1343 aa7.6□□□□□ -1.19
NPIPB3-206ENST00000534903 SPATA31A6Q5VVP1 1343 aa7.6□□□□□ -1.19
NPIPB3-206ENST00000534903 SCAF11Q99590 1463 aaKnown RBP7.6□□□□□ -1.19
NPIPB3-206ENST00000534903 STRCP1A6NGW2 1772 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 RPGRIP1LQ68CZ1 1315 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 NEXMIFQ5QGS0 1516 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 ANP32CO43423 234 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 CENPBP07199 599 aaPredicted RBP7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 RXRBP28702 533 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 CDK12Q9NYV4 1490 aaPredicted RBP7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 PIK3C2GO75747 1445 aa7.59□□□□□ -1.19
NPIPB3-206ENST00000534903 TMEM94Q12767 1356 aa7.59□□□□□ -1.2
NPIPB3-206ENST00000534903 EIF3AQ14152 1382 aaKnown RBP7.59□□□□□ -1.2
NPIPB3-206ENST00000534903 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 KCNA6P17658 529 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 LTKP29376 864 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 TXNDC2Q86VQ3 553 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 EID1Q9Y6B2 187 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 TMEM131LA2VDJ0 1609 aa7.58□□□□□ -1.2
NPIPB3-206ENST00000534903 ARHGAP23Q9P227 1491 aa7.57□□□□□ -1.2
NPIPB3-206ENST00000534903 SLC52A1Q9NWF4 448 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms