RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 CAMSAP2Q08AD1 1489 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 MRC2Q9UBG0 1479 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 SPATA31E1Q6ZUB1 1445 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
NCAPD3-214ENST00000534548 IPO8O15397 1037 aaKnown RBP12.74□□□□□ -0.37
NCAPD3-214ENST00000534548 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
NCAPD3-214ENST00000534548 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
NCAPD3-214ENST00000534548 NASPP49321 788 aaPredicted RBP12.74□□□□□ -0.37
NCAPD3-214ENST00000534548 PZPP20742 1482 aa12.74□□□□□ -0.37
NCAPD3-214ENST00000534548 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
NCAPD3-214ENST00000534548 ESPNB1AK53 854 aa12.73□□□□□ -0.37
NCAPD3-214ENST00000534548 POGKQ9P215 609 aa12.73□□□□□ -0.37
NCAPD3-214ENST00000534548 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
NCAPD3-214ENST00000534548 DISP1Q96F81 1524 aa12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 MORC1Q86VD1 984 aa12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 PHF14O94880 888 aa12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
NCAPD3-214ENST00000534548 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 APBB1O00213 710 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
NCAPD3-214ENST00000534548 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
NCAPD3-214ENST00000534548 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
NCAPD3-214ENST00000534548 C9orf84Q5VXU9 1444 aa12.69□□□□□ -0.38
NCAPD3-214ENST00000534548 E9PSI1 815 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 CCDC173Q0VFZ6 552 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 ST18O60284 1047 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 KIAA0556O60303 1618 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 PANK3Q9H999 370 aa12.68□□□□□ -0.38
NCAPD3-214ENST00000534548 RAPGEF6Q8TEU7 1601 aa12.67□□□□□ -0.38
NCAPD3-214ENST00000534548 BCL2L13Q9BXK5 485 aa12.67□□□□□ -0.38
NCAPD3-214ENST00000534548 ISY1Q9ULR0 285 aaKnown RBP12.66□□□□□ -0.38
NCAPD3-214ENST00000534548 KCNJ4P48050 445 aa12.66□□□□□ -0.38
NCAPD3-214ENST00000534548 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
NCAPD3-214ENST00000534548 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
NCAPD3-214ENST00000534548 MCM4P33991 863 aa12.64□□□□□ -0.39
NCAPD3-214ENST00000534548 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
NCAPD3-214ENST00000534548 KIF14Q15058 1648 aa12.64□□□□□ -0.39
NCAPD3-214ENST00000534548 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
NCAPD3-214ENST00000534548 APAF1O14727 1248 aa12.63□□□□□ -0.39
NCAPD3-214ENST00000534548 UQCRHP07919 91 aa12.63□□□□□ -0.39
NCAPD3-214ENST00000534548 RRP7AQ9Y3A4 280 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 KIF16BQ96L93 1317 aa12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-214ENST00000534548 FGD1P98174 961 aa12.61□□□□□ -0.39
NCAPD3-214ENST00000534548 ANKRD45Q5TZF3 282 aa12.61□□□□□ -0.39
NCAPD3-214ENST00000534548 ZKSCAN2Q63HK3 967 aa12.61□□□□□ -0.39
NCAPD3-214ENST00000534548 PTPRGP23470 1445 aa12.61□□□□□ -0.39
NCAPD3-214ENST00000534548 NUCB2P80303 420 aa12.61□□□□□ -0.39
NCAPD3-214ENST00000534548 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
NCAPD3-214ENST00000534548 CAVIN1Q6NZI2 390 aaKnown RBP12.6□□□□□ -0.39
NCAPD3-214ENST00000534548 ZNF592Q92610 1267 aa12.59□□□□□ -0.39
NCAPD3-214ENST00000534548 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
NCAPD3-214ENST00000534548 RNF214Q8ND24 703 aa12.59□□□□□ -0.39
NCAPD3-214ENST00000534548 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
NCAPD3-214ENST00000534548 WASHC2CQ9Y4E1 1318 aa12.59□□□□□ -0.39
NCAPD3-214ENST00000534548 ZSCAN30Q86W11 494 aa12.58□□□□□ -0.39
NCAPD3-214ENST00000534548 OS9Q13438 667 aaPredicted RBP12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 HMGN5P82970 282 aaKnown RBP12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 ATP10BO94823 1461 aa12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 HTATSF1O43719 755 aaKnown RBP12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 ADAMTS8Q9UP79 889 aa12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 RNF123Q5XPI4 1314 aa12.58□□□□□ -0.4
NCAPD3-214ENST00000534548 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
NCAPD3-214ENST00000534548 CLCN1P35523 988 aa12.57□□□□□ -0.4
NCAPD3-214ENST00000534548 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
NCAPD3-214ENST00000534548 CCDC66A2RUB6 948 aa12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 MBD5Q9P267 1494 aa12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
NCAPD3-214ENST00000534548 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
NCAPD3-214ENST00000534548 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
NCAPD3-214ENST00000534548 AAMPQ13685 434 aa12.55□□□□□ -0.4
NCAPD3-214ENST00000534548 DZIP1LQ8IYY4 767 aaKnown RBP12.55□□□□□ -0.4
NCAPD3-214ENST00000534548 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
NCAPD3-214ENST00000534548 KDM5CP41229 1560 aa12.54□□□□□ -0.4
NCAPD3-214ENST00000534548 TRIM6-TRIM34B2RNG4 842 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms