RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 PRR14Q9BWN1 585 aa10.37□□□□□ -0.75
CLNS1A-212ENST00000533957 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
CLNS1A-212ENST00000533957 ZPR1O75312 459 aa10.35□□□□□ -0.75
CLNS1A-212ENST00000533957 RBM26Q5T8P6 1007 aaKnown RBP10.35□□□□□ -0.75
CLNS1A-212ENST00000533957 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
CLNS1A-212ENST00000533957 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
CLNS1A-212ENST00000533957 OATP04181 439 aa10.34□□□□□ -0.75
CLNS1A-212ENST00000533957 HIC1Q14526 733 aa10.34□□□□□ -0.75
CLNS1A-212ENST00000533957 PCDHB3Q9Y5E6 796 aa10.34□□□□□ -0.75
CLNS1A-212ENST00000533957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
CLNS1A-212ENST00000533957 PXYLP1Q8TE99 480 aa10.32□□□□□ -0.76
CLNS1A-212ENST00000533957 BLOC1S3Q6QNY0 202 aa10.31□□□□□ -0.76
CLNS1A-212ENST00000533957 Q6ZNB5 142 aa10.31□□□□□ -0.76
CLNS1A-212ENST00000533957 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
CLNS1A-212ENST00000533957 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 SLC10A3P09131 477 aa10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 GGCXP38435 758 aa10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 LAPTM4AQ15012 233 aa10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 TMUB1Q9BVT8 246 aa10.3□□□□□ -0.76
CLNS1A-212ENST00000533957 GFRA3O60609 400 aa10.29□□□□□ -0.76
CLNS1A-212ENST00000533957 FECHP22830 423 aa10.29□□□□□ -0.76
CLNS1A-212ENST00000533957 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
CLNS1A-212ENST00000533957 CFHP08603 1231 aa10.28□□□□□ -0.76
CLNS1A-212ENST00000533957 METTL3Q86U44 580 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-212ENST00000533957 GNPATO15228 680 aa10.27□□□□□ -0.77
CLNS1A-212ENST00000533957 GPR37O15354 613 aa10.25□□□□□ -0.77
CLNS1A-212ENST00000533957 RSPH4AQ5TD94 716 aa10.24□□□□□ -0.77
CLNS1A-212ENST00000533957 RNF223E7ERA6 249 aa10.23□□□□□ -0.77
CLNS1A-212ENST00000533957 TLL1O43897 1013 aa10.22□□□□□ -0.77
CLNS1A-212ENST00000533957 DAXXQ9UER7 740 aaPredicted RBP10.21□□□□□ -0.77
CLNS1A-212ENST00000533957 NRG2O14511 850 aaPredicted RBP10.2□□□□□ -0.78
CLNS1A-212ENST00000533957 NR1I2O75469 434 aa10.2□□□□□ -0.78
CLNS1A-212ENST00000533957 SCUBE3Q8IX30 993 aa10.2□□□□□ -0.78
CLNS1A-212ENST00000533957 LCE2BO14633 110 aa10.19□□□□□ -0.78
CLNS1A-212ENST00000533957 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
CLNS1A-212ENST00000533957 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
CLNS1A-212ENST00000533957 SLC19A1P41440 591 aa10.18□□□□□ -0.78
CLNS1A-212ENST00000533957 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
CLNS1A-212ENST00000533957 PDZRN3Q9UPQ7 1066 aa10.18□□□□□ -0.78
CLNS1A-212ENST00000533957 S1PR4O95977 384 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 ADH1BP00325 375 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 PUS10Q3MIT2 529 aaKnown RBP10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 NLRP7Q8WX94 980 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 PHOX2BQ99453 314 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 RB1CC1Q8TDY2 1594 aa10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 ZCCHC6Q5VYS8 1495 aaKnown RBP10.17□□□□□ -0.78
CLNS1A-212ENST00000533957 GPIHBP1Q8IV16 184 aa10.16□□□□□ -0.78
CLNS1A-212ENST00000533957 NACADO15069 1562 aa10.16□□□□□ -0.78
CLNS1A-212ENST00000533957 VSIG10Q8N0Z9 540 aa10.15□□□□□ -0.78
CLNS1A-212ENST00000533957 RDH13Q8NBN7 331 aa10.15□□□□□ -0.78
CLNS1A-212ENST00000533957 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
CLNS1A-212ENST00000533957 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
CLNS1A-212ENST00000533957 MYO15BQ96JP2 1530 aa10.12□□□□□ -0.79
CLNS1A-212ENST00000533957 SPRYD7Q5W111 196 aa10.12□□□□□ -0.79
CLNS1A-212ENST00000533957 LIAT1Q6ZQX7 453 aa10.12□□□□□ -0.79
CLNS1A-212ENST00000533957 SPSB2Q99619 263 aa10.12□□□□□ -0.79
CLNS1A-212ENST00000533957 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
CLNS1A-212ENST00000533957 ATP6V1AP38606 617 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 GCGRP47871 477 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 FUT2Q10981 343 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 MORN1Q5T089 497 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 TRIM67Q6ZTA4 783 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 SULF1Q8IWU6 871 aa10.11□□□□□ -0.79
CLNS1A-212ENST00000533957 DCAF1Q9Y4B6 1507 aa10.09□□□□□ -0.79
CLNS1A-212ENST00000533957 THAP11Q96EK4 314 aa10.07□□□□□ -0.8
CLNS1A-212ENST00000533957 SLC27A5Q9Y2P5 690 aa10.07□□□□□ -0.8
CLNS1A-212ENST00000533957 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
CLNS1A-212ENST00000533957 PLA2G2CQ5R387 149 aa10.06□□□□□ -0.8
CLNS1A-212ENST00000533957 IRF6O14896 467 aa10.05□□□□□ -0.8
CLNS1A-212ENST00000533957 MAP2K5Q13163 448 aa10.05□□□□□ -0.8
CLNS1A-212ENST00000533957 ZNF697Q5TEC3 545 aa10.05□□□□□ -0.8
CLNS1A-212ENST00000533957 FMNL1O95466 1100 aaPredicted RBP10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 PRR20EP86478 221 aa10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 PRR20CP86479 221 aa10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 PRR20DP86480 221 aa10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 PRR20BP86481 221 aa10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 PRR20AP86496 221 aa10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
CLNS1A-212ENST00000533957 BRICD5Q6PL45 260 aa10.03□□□□□ -0.8
CLNS1A-212ENST00000533957 GDF9O60383 454 aa10.02□□□□□ -0.81
CLNS1A-212ENST00000533957 MINK1Q8N4C8 1332 aaPredicted RBP10.02□□□□□ -0.81
CLNS1A-212ENST00000533957 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
CLNS1A-212ENST00000533957 CD46P15529 392 aa10□□□□□ -0.81
CLNS1A-212ENST00000533957 TNFRSF10AO00220 468 aa9.99□□□□□ -0.81
CLNS1A-212ENST00000533957 DGAT1O75907 488 aa9.99□□□□□ -0.81
CLNS1A-212ENST00000533957 PKDCCQ504Y2 493 aa9.99□□□□□ -0.81
CLNS1A-212ENST00000533957 RPIAP49247 311 aa9.98□□□□□ -0.81
CLNS1A-212ENST00000533957 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
CLNS1A-212ENST00000533957 ZNF787Q6DD87 383 aa9.98□□□□□ -0.81
CLNS1A-212ENST00000533957 FCF1Q9Y324 198 aaKnown RBP9.98□□□□□ -0.81
CLNS1A-212ENST00000533957 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
CLNS1A-212ENST00000533957 MYT1Q01538 1121 aa9.97□□□□□ -0.81
CLNS1A-212ENST00000533957 RNF19BQ6ZMZ0 732 aa9.97□□□□□ -0.81
CLNS1A-212ENST00000533957 KDM4AO75164 1064 aa9.96□□□□□ -0.82
CLNS1A-212ENST00000533957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms